Three dimensional structure of mammalian tachykinin peptide neurokinin b bound to lipid micelles

Journal of Biomolecular Structure and Dynamics

Volumn 22, Issue 2, 2004, Pages 137-147

  Mantha, Anil K ^a   Chandrashekar, Indu R ^a   Baquer, Najma Z ^a   Cowsik, Sudha M ^a  

^a JAWAHARLAL NEHRU UNIVERSITY   (India)

Author keywords

2D NMR spectroscopy; Bioactive peptides; Circular dichroism (CD); Lipid induced structure; Neurokinin B; NK 3 agonist; Tachykinins

Indexed keywords

DEUTERIUM OXIDE; DODECYLPHOSPHORYLCHOLINE; LIPID; NEUROKININ 3 RECEPTOR AGONIST; NEUROKININ B; NEUROKININ DERIVATIVE; TACHYKININ;

AQUEOUS SOLUTION; ARTICLE; CIRCULAR DICHROISM; CORRELATION ANALYSIS; MAMMAL; MICELLE; MOLECULAR MODEL; NONHUMAN; PRIORITY JOURNAL; PROTEIN LIPID INTERACTION; PROTEIN MOTIF; PROTEIN STRUCTURE; PROTON NUCLEAR MAGNETIC RESONANCE; STRUCTURE ACTIVITY RELATION; STRUCTURE ANALYSIS; THREE DIMENSIONAL IMAGING;

MAMMALIA;

EID: 4444256282     PISSN: 07391102     EISSN: 15380254     Source Type: Journal    
DOI: 10.1080/07391102.2004.10506990     Document Type: Article

References (62)

1. Kimura, S., Okada, M., Sugita, Y., Kanazawa, I., and Munekata, E., 1983. Proc. Jpn. Acad., 59:101–104.
2. Nawa, H., Kotani, H., and Nakanishi, S., 1984. Nature, 312:729–734.
3. Krause, J. E., Chirgwin, J. M., Carter, M. S., Xu, Z. S., and Hershey, A. D., 1987. Proc. Natl. Acad. Sci. USA, 84:881–885.
4. Nakanishi, S., 1987. Physiol. Rev., 67:1117–1142.
5. Barker, R., 1991. Neuropeptides, 20:73–78.
6. Schwarzer, C., Williamson, J. M., Lothman, E. W., Vezzani, A., and Sperk, G., 1995. Neuroscience, 69:831–845.
7. Page, N. M., Woods, R. J., and Lowry, P. J., 2001. Regulatory Peptides, 98:97–104.
8. Wenk, G. L., Rance, N. E., and Mobley, S. L., 1995. Brain Research, 679:8–14.
9. Wenk, G. L., Zajaczkowski, W., and Danysz, W., 1997. Behav. Brain. Res., 83:129–133.
10. Schwyzer, R., 1987. EMBO J., 6:2255–2259.
11. Palczewski, K., Kumasaka, T., Hori, T., Behnke, C. A., Motoshima, H., Fox, B. A., Le Trong, I., Teller, D. C., Okada, T., Stenkamp, R. E., Yamamoto, M., and Miyano, M., 2000. Science, 289:739–745.
12. Hanley, M. R., and Jackson, T., 1987. Nature, 329:766–767.
13. Masu, Y., Nakayama, K., Tamaki, H., Harada, M., Kuno, Y., and Nakanishi, S., 1987. Nature, 329:836–838.
14. Nakanishi, S., 1991. Annu. Rev. Neurosci., 14:123–36.
15. Chassaing, G., Convert, O., and Lavielle, S., 1986a. Biochim. Biophys. Acta., 873:397–404.
16. Lavielle, S., Chassaing, G., Ploux, O., Loeuillet, D., Besseyre, J., Julien, S., Marquet, A., Convert, O., Beaujouan, J. C., Torrens, Y., Bergstrom, L., Saffroy, M., and Glowinski, J., 1988. Biochem. Pharmacol., 37:41–49.
17. Ananthanarayanan, V. S., and Orlicky, S., 1992. Biopolymers, 32:1765–1773.
18. Seelig, A., 1992. Biochemistry, 3:2897–2904.
19. Horne, J., Sadek, M., and Craik, D. J., 1993. Biochemistry, 32:7406–7412.
20. Wilson, J. C., Nielsen, K. J., Mcleish, M. J., and Craik, D. J., 1994. Biochemistry, 33:6802–6811.
21. Cowsik, S. M., Lucke, C., and Ruterjans, H., 1997. J. Biomol. Struct. Dyn., 15:27–36.
22. Whitehead, T. L., McNair, S. D., Hadden, C. E., Young, J. K., and Hicks, R. P., 1998. J. Med. Chem., 41:1497–1506.
23. Grace, C. R., Lynn, A. M., and Cowsik, S. M., 2001. J. Biomolecular Str. and Stereodynamics, 18:611–625.
24. Sumner, S. C. J., Gallagher, K. S., Davis, D. G., Covell, D. G., Jernigan, R. L., and Ferretti, J. A., 1990. J. Biomol. Struct. Dynam., 8:687–707.
25. Woolley, G. A., and Deber, C. M., 1987. Biopolymers, 26:S109–S121.
26. Wu, C., and Yang, C. T., 1983. Biochem. Biophys. Acta, 746:72–80.
27. Schwyzer, R., Erne, D., and Rolka, K., 1986. Helv. Chim. Acta., 69:1789–1797.
28. Brown, L. R., 1979. Biochim. Biophys. Acta, 557:135–148.
29. Lauterwein, J., Bosch, L., Brown, R., and Wüthrich, K., 1979. Biochem. Biophys. Acta, 556:44–264.
30. Braun, W., Wider, G., Lee, K. H., and Wüthrich, K., 1983. J. Mol. Biol., 169:921–948.
31. Wüthrich, K., 1986. NMR of Proteins and Nucleic Acids. New York:J. Wiley & Sons.
32. Güntert, P., Mumenthaler, C., and Wüthrich, K., 1997. J Mol Biol., 273:283–298.
33. Chen, Y. H., Yang, J. T., and Chau, K. H., 1974. Biochemistry, 11:4120–4131.
34. Woody, R. W., 1992. Adv. Biophys. Chem., 2:37–79.
35. Holzworth, G., and Doty, P., 1965. J. Am. Chem. Soc., 87:218–228.
36. Alder, A. J., Greenfield, N. J., and Fasman, G. D., 1973. Methods Enzymol., 27:675–735.
37. Chang, T. C., Wu, C. S. C., and Yung, J. T., 1978. Anal. Biochem., 91:13–31.
38. Bruch, M. D., Dhingra, M. M., and Gierasch, L. M., 1991. Struct. Funct. Genet., 10:130–139.
39. Rizo, J., Blanco, F. J., Kobe, B., Bruch, M. D., and Gierasch, L. M., 1993. Biochemistry, 32:4881–4894.
40. Wishart, D. S., Sykes, B. D., and Richards, F. M., 1992. Biochemistry, 31:1647–1651.
41. Wüthrich, K., Billeter, M., and Braun, W., 1984. J. Mol. Biol., 180:715–740.
42. Pardi, A., Billeter, M., and Wüthrich, K., 1984. J. Mol. Biol., 180:741–751.
43. Ptitsyn, O. B., and Finkelstein, A. V., 1983. Biopolymers, 22:15–25.
44. Karpen, M. E., DeHaseth, P. L., and Neet, K. E., 1992. Protein Science, 1:1333–1342.
45. Grace, C. R., Chandrashekar, I. R., and Cowsik, S. M., 2003. Biophysical J., 84:1–10.
46. Young, J. K., Anklin, C., and Hicks, R. P., 1994. Biopolymers, 34:1449–1462.
47. Keire, D. A., and Fletcher, T. G., 1996. Biophysical J., 70:1716–1721.
48. Chandrashekar, I. R., and Cowsik, S. M., 2003. Biophysical J., 85:4002–11.
49. Chassaing, G., Convert, O., and Lavielle, S., 1986b. Eur. J. Biochem., 154:77–85.
50. Tallon, M., Ron, D., Halle, D., Amodeo, P., Saviano, G., Temussi, P. A., Selinger, Z., Naider, F., and Chorev, M., 1993. Biopolymers, 33:915–926.
51. Comis, A., and Burcher, E., 1999. J. Pept. Res., 53:337–342.
52. Cascieri, M. A., Huang, R. R., Fong, T. M., Cheung, A. H., Sadowski, S., and Strader, C. D., 1992. Mol Pharmacol., 41:1096–1099.
53. Gether, U., Johansen, T. E., and Schwartz, T. W., 1993. J. Biol. Chem., 268:7893–7898.
54. Fong, T. M., Yu, H., Huang, R. R. C., and Strader, S. D., 1992. Biochemistry, 31:11806–11811.
55. Huang, R. R., Cheung, A. H., Mazina, K. E., Strader, C. D., and Fong, T. M., 1992. Biochem. Biophys. Res. Commun., 184:966–972.
56. Shigemoto, R., Yokota, Tsuchida, K., and Nakanishi, S., 1990. J. Biol. Chem., 265:623–628.
57. Seelig, A., and Macdonald, P. M., 1989. Biochemistry, 28:2490–2496.
58. Seelig, A., Alt, T., Lotz, S., and Holzemann, G., 1996. Biochemistry, 35:4365–4374.
59. Josien, H., Lavielle, S., Brunissen, A., Saffroy, M., Torrens, Y., and Beaujoun, J. C., 1994. J. Med. Chem., 37:1586–1601.
60. Norel, R., Lin, L. S., Wolfson, H. J., and Nussinov, R., 1994. Biopolymers, 34:933–940.
61. Willialms, D. H., and Willialms, X. M.S., 1996. Chem Biol., 3:695–701.
62. Buck, S. H., and Shatzer, S. A., 1988. Life Sci., 42:2701–2708.