-
1
-
-
0025607112
-
Positive and negative regulation of transcription by a cleavage product of Ada protein
-
Akimaru, H., K. Sakumi, T. Yoshikai, M. Anai, and M. Sekiguchi. 1990. Positive and negative regulation of transcription by a cleavage product of Ada protein. J. Mol. Biol. 216:261-273.
-
(1990)
J. Mol. Biol.
, vol.216
, pp. 261-273
-
-
Akimaru, H.1
Sakumi, K.2
Yoshikai, T.3
Anai, M.4
Sekiguchi, M.5
-
2
-
-
0006755020
-
Physical and genetic characterization of the glnA-glnG region of the Escherichia coli chromosome
-
Backman, K., Y.-M. Chen, and B. Magasanik. 1981. Physical and genetic characterization of the glnA-glnG region of the Escherichia coli chromosome. Proc. Natl. Acad. Sci. USA 78:3743-3747.
-
(1981)
Proc. Natl. Acad. Sci. USA
, vol.78
, pp. 3743-3747
-
-
Backman, K.1
Chen, Y.-M.2
Magasanik, B.3
-
3
-
-
0032860246
-
Amino acid-DNA contacts by RhaS: An AraC family transcription activator
-
Bhende, P. M., and S. M. Egan. 1999. Amino acid-DNA contacts by RhaS: an AraC family transcription activator. J. Bacteriol. 181:5185-5192.
-
(1999)
J. Bacteriol.
, vol.181
, pp. 5185-5192
-
-
Bhende, P.M.1
Egan, S.M.2
-
4
-
-
0033901463
-
Genetic evidence that transcription activation by RhaS involves specific amino acid contacts with sigma 70
-
Bhende, P. M., and S. M. Egan. 2000. Genetic evidence that transcription activation by RhaS involves specific amino acid contacts with sigma 70. J. Bacteriol. 182:4959-4969.
-
(2000)
J. Bacteriol.
, vol.182
, pp. 4959-4969
-
-
Bhende, P.M.1
Egan, S.M.2
-
6
-
-
0036203066
-
Structure of the bacterial RNA polymerase promoter specificity σ subunit
-
Campbell, E. A., O. Muzzin, M. Chlenov, J. L. Sun, C. A. Olson, O. Weinman, M. L. Trester-Zedlitz, and S. A. Darst. 2002. Structure of the bacterial RNA polymerase promoter specificity σ subunit. Mol. Cell 9:527-539.
-
(2002)
Mol. Cell
, vol.9
, pp. 527-539
-
-
Campbell, E.A.1
Muzzin, O.2
Chlenov, M.3
Sun, J.L.4
Olson, C.A.5
Weinman, O.6
Trester-Zedlitz, M.L.7
Darst, S.A.8
-
7
-
-
0033624446
-
Recognition of overlapping nucleotides by AraC and the sigma subunit of RNA polymerase
-
Dhiman, A., and R. Schleif. 2000. Recognition of overlapping nucleotides by AraC and the sigma subunit of RNA polymerase. J. Bacteriol. 182:5076-5081.
-
(2000)
J. Bacteriol.
, vol.182
, pp. 5076-5081
-
-
Dhiman, A.1
Schleif, R.2
-
8
-
-
0038354921
-
Region 4 of sigma as a target for transcription regulation
-
Dove, S. L., S. A. Darst, and A. Hochschild. 2003. Region 4 of sigma as a target for transcription regulation. Mol. Microbiol. 48:863-874.
-
(2003)
Mol. Microbiol.
, vol.48
, pp. 863-874
-
-
Dove, S.L.1
Darst, S.A.2
Hochschild, A.3
-
9
-
-
0036786814
-
Growing repertoire of AraC/XylS activators
-
Egan, S. M. 2002. Growing repertoire of AraC/XylS activators. J. Bacteriol. 184:5529-5532.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 5529-5532
-
-
Egan, S.M.1
-
10
-
-
0028173180
-
DNA-dependent renaturation of an insoluble DNA binding protein. Identification of the RhaS binding site at rhaBAD
-
Egan, S. M., and R. F. Schleif. 1994. DNA-dependent renaturation of an insoluble DNA binding protein. Identification of the RhaS binding site at rhaBAD. J. Mol. Biol. 243:821-829.
-
(1994)
J. Mol. Biol.
, vol.243
, pp. 821-829
-
-
Egan, S.M.1
Schleif, R.F.2
-
11
-
-
0027368853
-
A regulatory cascade in the induction of rhaBAD
-
Egan, S. M., and R. F. Schleif. 1993. A regulatory cascade in the induction of rhaBAD. J. Mol. Biol. 234:87-98.
-
(1993)
J. Mol. Biol.
, vol.234
, pp. 87-98
-
-
Egan, S.M.1
Schleif, R.F.2
-
12
-
-
0028034697
-
Reaching out: Locating and lengthening the interdomain linker in AraC protein
-
Eustance, R. J., S. A. Bustos, and R. E. Schleif. 1994. Reaching out: locating and lengthening the interdomain linker in AraC protein. J. Mol. Biol. 242:330-338.
-
(1994)
J. Mol. Biol.
, vol.242
, pp. 330-338
-
-
Eustance, R.J.1
Bustos, S.A.2
Schleif, R.E.3
-
13
-
-
0031452318
-
AraC/XylS family of transcriptional regulators
-
Gallegos, M.-T., R. Schleif, A. Bairoch, K. Hofmann, and J. L. Ramos. 1997. AraC/XylS family of transcriptional regulators. Microbiol. Mol. Biol. Rev. 61:393-410.
-
(1997)
Microbiol. Mol. Biol. Rev.
, vol.61
, pp. 393-410
-
-
Gallegos, M.-T.1
Schleif, R.2
Bairoch, A.3
Hofmann, K.4
Ramos, J.L.5
-
14
-
-
0022351923
-
Positive selection procedure for entrapment of insertion sequence elements in gram-negative bacteria
-
Gay, P., D. Le Coq, M. Steinmetz, T. Berkelman, and C. I. Kado. 1985. Positive selection procedure for entrapment of insertion sequence elements in gram-negative bacteria. J. Bacteriol. 164:918-921.
-
(1985)
J. Bacteriol.
, vol.164
, pp. 918-921
-
-
Gay, P.1
Le Coq, D.2
Steinmetz, M.3
Berkelman, T.4
Kado, C.I.5
-
15
-
-
1342342820
-
Transcription activation at the Escherichia coli melAB promoter: Interactions of MelR with the C-terminal domain of the RNA polymerase alpha subunit
-
Grainger, D. C., T. A. Belyaeva, D. J. Lee, E. I. Hyde, and S. J. Busby. 2004. Transcription activation at the Escherichia coli melAB promoter: interactions of MelR with the C-terminal domain of the RNA polymerase alpha subunit. Mol Microbiol. 51:1311-1320.
-
(2004)
Mol. Microbiol.
, vol.51
, pp. 1311-1320
-
-
Grainger, D.C.1
Belyaeva, T.A.2
Lee, D.J.3
Hyde, E.I.4
Busby, S.J.5
-
16
-
-
1542616357
-
Transcription activation at the Escherichia coli melAB promoter: Interactions of MelR with its DNA target site and with domain 4 of the RNA polymerase sigma subunit
-
Grainger, D. C., C. L. Webster, T. A. Belyaeva, E. I. Hyde, and S. J. Busby. 2004. Transcription activation at the Escherichia coli melAB promoter: interactions of MelR with its DNA target site and with domain 4 of the RNA polymerase sigma subunit. Mol Microbiol. 51:1297-1309.
-
(2004)
Mol. Microbiol.
, vol.51
, pp. 1297-1309
-
-
Grainger, D.C.1
Webster, C.L.2
Belyaeva, T.A.3
Hyde, E.I.4
Busby, S.J.5
-
17
-
-
0034460874
-
Interdependence of activation at rhaSR by cyclic AMP receptor protein, the RNA polymerase alpha subunit C-terminal domain and RhaR
-
Holcroft, C. C., and S. M. Egan. 2000. Interdependence of activation at rhaSR by cyclic AMP receptor protein, the RNA polymerase alpha subunit C-terminal domain and RhaR. J. Bacteriol. 182:6774-6782.
-
(2000)
J. Bacteriol.
, vol.182
, pp. 6774-6782
-
-
Holcroft, C.C.1
Egan, S.M.2
-
18
-
-
0021917550
-
Mutations in the sigma subunit of E. coli RNA polymerase which affect positive control of transcription
-
Hu, J. C., and C. A. Gross. 1985. Mutations in the sigma subunit of E. coli RNA polymerase which affect positive control of transcription. Mol. Gen. Genet. 199:7-13.
-
(1985)
Mol. Gen. Genet.
, vol.199
, pp. 7-13
-
-
Hu, J.C.1
Gross, C.A.2
-
19
-
-
1642441938
-
Structure of a ternary transcription activation complex
-
Jain, D., B. E. Nickels, L. Sun, A. Hochschild, and S. A. Darst. 2004. Structure of a ternary transcription activation complex. Mol. Cell 13:45-53.
-
(2004)
Mol. Cell
, vol.13
, pp. 45-53
-
-
Jain, D.1
Nickels, B.E.2
Sun, L.3
Hochschild, A.4
Darst, S.A.5
-
20
-
-
0028879546
-
Purification and regulatory properties of MarA protein, a transcriptional activator of Escherichia coli multiple antibiotic and superoxide resistance promoters
-
Jair, K., R. G. Martin, J. L. Rosner, N. Fujita, A. Ishihama, and R. E. Wolf, Jr. 1995. Purification and regulatory properties of MarA protein, a transcriptional activator of Escherichia coli multiple antibiotic and superoxide resistance promoters. J. Bacteriol. 177:7100-7104.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 7100-7104
-
-
Jair, K.1
Martin, R.G.2
Rosner, J.L.3
Fujita, N.4
Ishihama, A.5
Wolf Jr., R.E.6
-
21
-
-
0029671285
-
Ambidextrous transcriptional activation by SoxS: Requirement for the C-terminal domain of the RNA polymerase alpha subunit in a subset of Escherichia coli superoxide-inducible genes
-
Jair, K.-W., W. P. Fawcett, N. Fujita, A. Ishihama, and R. E. Wolf, Jr. 1996. Ambidextrous transcriptional activation by SoxS: requirement for the C-terminal domain of the RNA polymerase alpha subunit in a subset of Escherichia coli superoxide-inducible genes. Mol. Microbiol. 19:307-317.
-
(1996)
Mol. Microbiol.
, vol.19
, pp. 307-317
-
-
Jair, K.-W.1
Fawcett, W.P.2
Fujita, N.3
Ishihama, A.4
Wolf Jr., R.E.5
-
22
-
-
0033967976
-
Functional domains of the TOL plasmid transcription factor XylS
-
Kaldalu, N., U. Toots, V. de Lorenzo, and M. Ustav. 2000. Functional domains of the TOL plasmid transcription factor XylS. J. Bacteriol. 182:1118-1126.
-
(2000)
J. Bacteriol.
, vol.182
, pp. 1118-1126
-
-
Kaldalu, N.1
Toots, U.2
De Lorenzo, V.3
Ustav, M.4
-
23
-
-
0028287795
-
70 that result in defects in phage λ repressor-stimulated transcription
-
70 that result in defects in phage λ repressor-stimulated transcription. J. Bacteriol. 176:2991-2998.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 2991-2998
-
-
Kuldell, N.1
Hochschild, A.2
-
24
-
-
0033058086
-
70 subunit of RNA polymerase according to promoter architecture: Identification of the target of Ada activation at the alkA promoter
-
70 subunit of RNA polymerase according to promoter architecture: identification of the target of Ada activation at the alkA promoter. J. Bacteriol. 181:1524-1529.
-
(1999)
J. Bacteriol.
, vol.181
, pp. 1524-1529
-
-
Landini, P.1
Busby, S.J.2
-
25
-
-
0033978638
-
The type 4 prepilin peptidases comprise a novel family of aspartic acid proteases
-
LaPointe, C. F., and R. K. Taylor. 2000. The type 4 prepilin peptidases comprise a novel family of aspartic acid proteases. J. Biol. Chem. 275:1502-1510.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 1502-1510
-
-
LaPointe, C.F.1
Taylor, R.K.2
-
26
-
-
0028197624
-
Target of the trancriptional activation function of phage λ cI protein
-
Li, M., H. Moyle, and M. M. Susskind. 1994. Target of the trancriptional activation function of phage λ cI protein. Science 263:75-77.
-
(1994)
Science
, vol.263
, pp. 75-77
-
-
Li, M.1
Moyle, H.2
Susskind, M.M.3
-
29
-
-
0025357958
-
Activation of ara operons by a truncated AraC protein does not require inducer
-
Menon, K. P., and N. L. Lee. 1990. Activation of ara operons by a truncated AraC protein does not require inducer. Proc. Natl. Acad. Sci. USA 87:3708-3712.
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 3708-3712
-
-
Menon, K.P.1
Lee, N.L.2
-
30
-
-
0018817388
-
Gene regulation at the right operator (OR) of bacteriophage lambda. II. OR1, OR2, and OR3: Their roles in mediating the effects of repressor and cro
-
Meyer, B. J., R. Maurer, and M. Ptashne. 1980. Gene regulation at the right operator (OR) of bacteriophage lambda. II. OR1, OR2, and OR3: their roles in mediating the effects of repressor and cro. J. Mol. Biol. 139:163-194.
-
(1980)
J. Mol. Biol.
, vol.139
, pp. 163-194
-
-
Meyer, B.J.1
Maurer, R.2
Ptashne, M.3
-
31
-
-
0031924072
-
Use of bacteriophage λ recombination functions to promote gene replacement in Escherichia coli
-
Murphy, K. C. 1998. Use of bacteriophage λ recombination functions to promote gene replacement in Escherichia coli. J. Bacteriol. 180:2063-2071.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 2063-2071
-
-
Murphy, K.C.1
-
32
-
-
0034603783
-
PCR-mediated gene replacement in Escherichia coli
-
Murphy, K. C., K. G. Campellone, and A. R. Poteete. 2000. PCR-mediated gene replacement in Escherichia coli. Gene 246:321-330.
-
(2000)
Gene
, vol.246
, pp. 321-330
-
-
Murphy, K.C.1
Campellone, K.G.2
Poteete, A.R.3
-
33
-
-
0023009336
-
Regulatory mechanisms for induction of synthesis of repair enzymes in response to alkylating agents: Ada protein acts as a transcriptional regulator
-
Nakabeppu, Y., and M. Sekiguchi. 1986. Regulatory mechanisms for induction of synthesis of repair enzymes in response to alkylating agents: ada protein acts as a transcriptional regulator. Proc. Natl. Acad. Sci. USA 83:6297-6301.
-
(1986)
Proc. Natl. Acad. Sci. USA
, vol.83
, pp. 6297-6301
-
-
Nakabeppu, Y.1
Sekiguchi, M.2
-
35
-
-
0036435823
-
Protein-protein and protein-DNA interactions of sigma70 region 4 involved in transcription activation by lambdacl
-
Nickels, B. E., S. L. Dove, K. S. Murakami, S. A. Darst, and A. Hochschild. 2002. Protein-protein and protein-DNA interactions of sigma70 region 4 involved in transcription activation by lambdacl. J. Mol. Biol. 324:17-34.
-
(2002)
J. Mol. Biol.
, vol.324
, pp. 17-34
-
-
Nickels, B.E.1
Dove, S.L.2
Murakami, K.S.3
Darst, S.A.4
Hochschild, A.5
-
36
-
-
0032699605
-
70 subunits participate in transcription of the Escherichia coli uhpT promoter
-
70 subunits participate in transcription of the Escherichia coli uhpT promoter. J. Bacteriol. 181:7266-7273.
-
(1999)
J. Bacteriol.
, vol.181
, pp. 7266-7273
-
-
Olekhnovich, I.N.1
Kadner, R.J.2
-
37
-
-
0034936966
-
Identification of the domains of UreR, an AraC-like transcriptional regulator of the urease gene cluster in Proteus mirabilis
-
Poore, C. A., C. Coker, J. D. Dattelbaum, and H. L. Mobley. 2001. Identification of the domains of UreR, an AraC-like transcriptional regulator of the urease gene cluster in Proteus mirabilis. J. Bacteriol. 183:4526-4535.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 4526-4535
-
-
Poore, C.A.1
Coker, C.2
Dattelbaum, J.D.3
Mobley, H.L.4
-
38
-
-
0032169864
-
A novel DNA-binding motif in MarA: The first structure for an AraC family transcriptional activator
-
Rhee, S., R. G. Martin, J. L. Rosner, and D. R. Davies. 1998. A novel DNA-binding motif in MarA: the first structure for an AraC family transcriptional activator. Proc. Natl. Acad. Sci. USA 95:10413-10418.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 10413-10418
-
-
Rhee, S.1
Martin, R.G.2
Rosner, J.L.3
Davies, D.R.4
-
39
-
-
0015482053
-
ALT: A new factor involved in the synthesis of RNA by Escherichia coli
-
Silverstone, A. E., M. Goman, and J. G. Scaife. 1972. ALT: a new factor involved in the synthesis of RNA by Escherichia coli. Mol. Gen. Genet. 118:223-234.
-
(1972)
Mol. Gen. Genet.
, vol.118
, pp. 223-234
-
-
Silverstone, A.E.1
Goman, M.2
Scaife, J.G.3
-
40
-
-
0023255472
-
Improved single and multicopy lac-based cloning vectors for protein and operon fusions
-
Simons, R. W., F. Houman, and N. Kleckner. 1987. Improved single and multicopy lac-based cloning vectors for protein and operon fusions. Gene 53:85-96.
-
(1987)
Gene
, vol.53
, pp. 85-96
-
-
Simons, R.W.1
Houman, F.2
Kleckner, N.3
-
41
-
-
0030964038
-
Structural basis for ligand-regulated oligomerization of AraC
-
Soisson, S. M., B. MacDougall-Shackleton, R. Schleif, and C. Wolberger. 1997. Structural basis for ligand-regulated oligomerization of AraC. Science 276:421-425.
-
(1997)
Science
, vol.276
, pp. 421-425
-
-
Soisson, S.M.1
MacDougall-Shackleton, B.2
Schleif, R.3
Wolberger, C.4
-
42
-
-
0023660796
-
Positive regulation of the Escherichia coli L-rhamnose operon is mediated by the products of tandemly repeated regulatory genes
-
Tobin, J. F., and R. F. Schleif. 1987. Positive regulation of the Escherichia coli L-rhamnose operon is mediated by the products of tandemly repeated regulatory genes. J. Mol. Biol. 196:789-799.
-
(1987)
J. Mol. Biol.
, vol.196
, pp. 789-799
-
-
Tobin, J.F.1
Schleif, R.F.2
-
43
-
-
0025162032
-
Purification and properties of RhaR, the positive regulator of the L-rhamnose operons of Escherichia coli
-
Tobin, J. F., and R. F. Schleif. 1990. Purification and properties of RhaR, the positive regulator of the L-rhamnose operons of Escherichia coli. J. Mol. Biol. 211:75-89.
-
(1990)
J. Mol. Biol.
, vol.211
, pp. 75-89
-
-
Tobin, J.F.1
Schleif, R.F.2
-
44
-
-
0016246771
-
RNA polymerase-promoter interactions: Some general principles
-
Travers, A. 1974. RNA polymerase-promoter interactions: some general principles. Cell 3:97-104.
-
(1974)
Cell
, vol.3
, pp. 97-104
-
-
Travers, A.1
-
45
-
-
0029889983
-
Transcriptional regulation of the Escherichia coli rhaT gene
-
Via, P., J. Badia, L. Baldoma, N. Obradors, and J. Aguilar. 1996. Transcriptional regulation of the Escherichia coli rhaT gene. Microbiology 142:1833-1840.
-
(1996)
Microbiology
, vol.142
, pp. 1833-1840
-
-
Via, P.1
Badia, J.2
Baldoma, L.3
Obradors, N.4
Aguilar, J.5
-
46
-
-
0021943518
-
Improved M13 phage cloning vectors and host strains: Nucleotide sequences of the M13mp18 and pUC19 vectors
-
Yanisch-Perron, C., J. Vieira, and J. Messing. 1985. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene 33:103-119.
-
(1985)
Gene
, vol.33
, pp. 103-119
-
-
Yanisch-Perron, C.1
Vieira, J.2
Messing, J.3
|