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Volumn 24, Issue 11, 2008, Pages 1416-1417

SwissPIT: A novel approach for pipelined analysis of mass spectrometry data

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; DATA ANALYSIS SOFTWARE; INFORMATION RETRIEVAL; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEOMICS; TANDEM MASS SPECTROMETRY;

EID: 44349181542     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/btn139     Document Type: Article
Times cited : (6)

References (11)
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    • Aebersold, R.1    Mann, M.2
  • 2
    • 0041358793 scopus 로고    scopus 로고
    • OLAV: Towards high-throughput tandem mass spectrometry data identification
    • Colinge,J. et al. (2003) OLAV: Towards high-throughput tandem mass spectrometry data identification. Proteomics, 3, 1454-1463.
    • (2003) Proteomics , vol.3 , pp. 1454-1463
    • Colinge, J.1
  • 3
    • 0141955057 scopus 로고    scopus 로고
    • A method for reducing the time required to match protein sequences with tandem mass spectra
    • Craig,R. and Beavis,R.C. (2003) A method for reducing the time required to match protein sequences with tandem mass spectra. Rapid Commun. Mass Spectrom, 17, 2310-2316.
    • (2003) Rapid Commun. Mass Spectrom , vol.17 , pp. 2310-2316
    • Craig, R.1    Beavis, R.C.2
  • 4
    • 33847630405 scopus 로고    scopus 로고
    • Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry
    • Elias,J.E. and Gygi,S.P. (2007) 'Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry. Nat. Methods, 4, 207-214.
    • (2007) Nat. Methods , vol.4 , pp. 207-214
    • Elias, J.E.1    Gygi, S.P.2
  • 5
    • 34447260760 scopus 로고    scopus 로고
    • MASPECTRAS: A platform for management and analysis of proteomics LC-MS/MS data
    • Hartler,J. et al. (2007) MASPECTRAS: A platform for management and analysis of proteomics LC-MS/MS data. BMC Bioinformatics, 8, 197.
    • (2007) BMC Bioinformatics , vol.8 , pp. 197
    • Hartler, J.1
  • 6
    • 0038047148 scopus 로고    scopus 로고
    • Popitam: Towards new heuristic strategies to improve protein identification from tandem mass spectrometry data
    • Hernandez,P. et al. (2003) Popitam: Towards new heuristic strategies to improve protein identification from tandem mass spectrometry data. Proteomics, 3, 870-878.
    • (2003) Proteomics , vol.3 , pp. 870-878
    • Hernandez, P.1
  • 7
    • 33644898528 scopus 로고    scopus 로고
    • Automated protein identification by tandem mass spectrometry: Issues and strategies
    • Hernandez,P. et al. (2006) Automated protein identification by tandem mass spectrometry: Issues and strategies. Mass Spectrom Rev. 25, 235-254.
    • (2006) Mass Spectrom Rev , vol.25 , pp. 235-254
    • Hernandez, P.1
  • 8
    • 33746930864 scopus 로고    scopus 로고
    • A uniform proteomics MS/MS analysis platform utilizing open XML file formats
    • msb4100024-E1-msb4100024-E8
    • Keller,A. et al. (2005) A uniform proteomics MS/MS analysis platform utilizing open XML file formats. Mol. Syst. Biol., 1 msb4100024-E1-msb4100024-E8.
    • (2005) Mol. Syst. Biol , vol.1
    • Keller, A.1
  • 9
    • 33750600611 scopus 로고    scopus 로고
    • Proteome informatics I: Bioinformatics tools for processing experimental data
    • Palagi,P.M. et al. (2006) Proteome informatics I: Bioinformatics tools for processing experimental data. Proteomics, 6, 5435-5444.
    • (2006) Proteomics , vol.6 , pp. 5435-5444
    • Palagi, P.M.1
  • 11
    • 27544511899 scopus 로고    scopus 로고
    • InsPecT: Identification of posttranslationally modified peptides from tandem mass spectra
    • Tanner,S. et al. (2005) InsPecT: Identification of posttranslationally modified peptides from tandem mass spectra. Anal. Chem., 77, 4626-4639.
    • (2005) Anal. Chem , vol.77 , pp. 4626-4639
    • Tanner, S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.