Mapping functions

Genetica

Volumn 133, Issue 3, 2008, Pages 235-246

  Tan, Yuan De ^a   Fornage, Myriam ^b  

^a HUNAN NORMAL UNIVERSITY   (China)

^b UNIVERSITY OF TEXAS MEDICAL SCHOOL   (United States)

Author keywords

Coefficient of coincidence; Function; Linkage; Map; Map distance; Recombination

Indexed keywords

ANIMAL; ARTICLE; CHROMATID; CHROMOSOME MAP; GENE CONVERSION; GENETICS; GENOTYPE; HUMAN; METHODOLOGY; SENSITIVITY AND SPECIFICITY; UNCERTAINTY;

ANIMALS; CHROMATIDS; CHROMOSOME MAPPING; GENE CONVERSION; GENOTYPE; HUMANS; SENSITIVITY AND SPECIFICITY; UNCERTAINTY;

EID: 44349116185     PISSN: 00166707     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10709-007-9207-9     Document Type: Article

References (42)

1. Amati P, Meselson M (1965) Localized negative interference in bacteriophage λ. Genetics 51:369-379
2. Auger DL, Sheridan WF (2001) Negative interference in maize translocation heterozygotes. Genetics 159:1717-1726
3. Bailey NTJ (1961) Introduction to the mathematical theory of genetic linkage. Oxford University Press, Oxford, pp 147-148
4. Beck B (1980) High negative interference and recombination in bacteriophage T5. Genetics 96:25-41
5. Bowring FJ, Catcheside DEA (1999) Evidence for negative interference: clustering of crossovers close to the am locus in Neurospora crassa among am recombinants. Genetics 152:965-969
6. Broman KW, Weber JL (2000) Characterization of human interference. Am J Hum Genet 66:1911-1926
7. Carter TC, Falconer DS (1951) Stocks for detecting linkage in the mouse and the theory of their design. J Genet 50:307-323
8. Cobbs G (1978) Renewal process approach to the theory of genetic linkage: case of no chromatid interference. Genetics 89:563-581
9. Davis L, Smith GR (2006) The meiotic bouque promotes homolog interactions and restricts ectopic recombination in Schizosaccharomyces pombe. Genetics 174:167-177
10. Doira H, Sakate S, Kihara H, Tamura T (1981) Genetical studies of the "mottled translucent of var" mutations in Bombyx mori. J Sericult Sci Jpn 50:185-189
11. Esch E,Weber WE (2002) Investigation of interference in barley (Hordeum vulgare L.) using the coefficient of coincidence. Theor Appl Genet 104:786-796
12. Felsenstein J (1979) A mathematically tractable family of genetic mapping functions with different amounts of interference. Genetics 91:769-775
13. Fogel S, Hurst DD, Mortimer RK (1971) Gene conversion in unselected tetrads from multipoint crosses. In: Kimber G, Redei G (eds) Stadler Genetics Symposia, vols 1 and 2. University of Missouri, Columbia MO, pp 89-110
14. Foss ER, Lande F, Stahl W, Steinberg CM (1993) Chiasma interference as a function of genetic distance. Genetics 133:681-691
15. Fox DP (1973) The control of chiasma distribution in the locust, Schistocera gregaria (Forskål). Chromosoma 43:289-328
16. Haldane JBS (1919) The combination of linkage values, and the calculation of distances between the loci of linked factors. J Genet 8:299-309
17. King JS, Mortimer RK (1990) A polymerization model of chiasma interference and corresponding computer simulation. Genetics 126:1127-1138
18. Kosambi DD (1944) The estimation of the map distance from recombination values. Ann Eugen 12:172-175
19. Lander ES, Green P, Abrahamson J, Barlow A, Daly M J et al (1987) MapMaker: an interactive computer package for constructing genetic linkage maps of experimental and natural populations. Genomics 1:174-181
20. Liu BH (1998) Statistical genomics: linkage, mapping, and QTL analysis. CRC Press, Boca Raton, pp 322-324
21. McPeek MS, Speed TP (1995) Modeling interference in genetic recombination. Genetics 139:1031-1044
22. Mortimer RK, Fogel S (1974) Genetical interference and gene conversion. In: Grell RF (ed) Mechanism in recombination. Plenum, New York, pp 263-275
23. Muller HJ (1916) The mechanism of crossing-over. Am Nat 50:195-434
24. Perkins DD (1962a) The frequency in Neurospora tetrads of multiply exchanges within short intervals. Genet Res 3:315-327
25. Perkins DD (1962b) Crossing-over and interference in a multiply marked chromosome arm of Neurospora. Genetics 47:1235-1274
26. Qin J (1988) Genetical studies on the chocolate-2 in the silkworm, Bombyx mori: locus of the ch-2 gene, and the eighteenth linkage group in the silkworm. Sci Sericult 14:199-205
27. Rao DC, Morton NE, Lindsten J, Hulten M, Yee S (1977) A map function for man. Hum Hered 27:99-104
28. Soriano P, Keitger EA, Schorderet DF, Harbers K, Gartler SM, Jaenisch R (1987) High rate of recombination and double crossovers in the mouse pseudoautosomal region during male meiosis. Proc Natl Acad Sci USA 84:7218-7220
29. Stahl FW, Foss HM, Young LS, Borts RH, Abdullah MFF, Copenhaver GP (2004) Does Interference Count in Saccharomyces cerevisiae. Genetics 168:35-48
30. Stam P (1979) Interference in genetic crossing over and chromosome mapping. Genetics 92:573-594
31. Sturt E (1976) A map function for human chromosomes. Ann Hum Genet 40:147-163
32. Sturtevant AH (1915) The behavior of chromosomes as studied through linkage. Z Abstam Vererbung 13:234-287
33. Sturtevant AH, Bridge CB, Morgan TH (1919) The spatial relations of genes. Proc Natl Acad Sci USA 5:n168-n173
34. Tan Y-D, Fu Y-X (2006) A novel method for estimating linkage maps. Genetics 173:2383-2390
35. 2 population. Genetics 175:923-931
36. Weeks DE, Lathrop GM, Ott J (1993) Multipoint mapping under genetic interference. Hum Hered 43:86-97
37. Weinstein A (1936) The theory of multiple-strand crossing over. Genetics 21:155-199
38. Woodward DO, Woodward VW (1983) Concepts of molecular genetics-information flow in genetics and evolution. Chinese Version. Shanghai Science and technology Press, Shanghai, pp 157-175
39. Zhao H, Speed TP, McPeek MS (1995a) Statistical analysis of interference using the chi-square model. Genetics 139:1045-1056
40. Zhao H, McPeek MS, Speed TP (1995b) Statistical analysis of chromatid interference. Genetics 139:1057-1065
41. Zhao H, McPeek MS (1996) On genetic map function. Genetics 142:1369-1377
42. Zwick ME, Cutler DJ, Langley CH (1999) Classic weistein: tetrad analysis, genetic variation and achiasmate segration in Drosophila and humans. Genetics 152:1615-1629