메뉴 건너뛰기




Volumn 121, Issue 3, 2008, Pages 257-266

How can we exploit functional genomics approaches for understanding the nature of plant defences? Barley as a case study

Author keywords

Barley; Blumeria graminis f.sp. hordei; Functional genomics; Hordeum vulgare; NAC transcription factors; Pathogen; Plants

Indexed keywords

BARLEY; DECIDUOUS TREE; DISEASE RESISTANCE; GENE EXPRESSION; GENOMICS; HERB; PLANT DEFENSE; RICE;

EID: 44249109019     PISSN: 09291873     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10658-008-9271-8     Document Type: Conference Paper
Times cited : (9)

References (51)
  • 1
    • 0031153960 scopus 로고    scopus 로고
    • Genes involved in organ separation in Arabidopsis: An analysis of the cup-shaped cotyledon mutant
    • Aida, M., Ishida, T., Fukaki, H., Fujisawa, H., & Tasaka, M. (1997). Genes involved in organ separation in Arabidopsis: An analysis of the cup-shaped cotyledon mutant. The Plant Cell, 9, 841-857.
    • (1997) The Plant Cell , vol.9 , pp. 841-857
    • Aida, M.1    Ishida, T.2    Fukaki, H.3    Fujisawa, H.4    Tasaka, M.5
  • 3
    • 0029355897 scopus 로고
    • ESTablishing a human transcript map
    • Boguski, M. S., & Schuler, G. D. (1995). ESTablishing a human transcript map. Nature Genetics, 10, 369-371.
    • (1995) Nature Genetics , vol.10 , pp. 369-371
    • Boguski, M.S.1    Schuler, G.D.2
  • 4
    • 33747497083 scopus 로고    scopus 로고
    • Stage-specific suppression of basal defense discriminates barley plants containing fast- and delayed-acting Mla powdery mildew resistance alleles
    • Caldo, R. A., Nettleton, D., Peng, J., & Wise, R. P. (2006). Stage-specific suppression of basal defense discriminates barley plants containing fast- and delayed-acting Mla powdery mildew resistance alleles. Molecular Plant-Microbe Interactions, 19, 939-947.
    • (2006) Molecular Plant-Microbe Interactions , vol.19 , pp. 939-947
    • Caldo, R.A.1    Nettleton, D.2    Peng, J.3    Wise, R.P.4
  • 5
    • 4544351273 scopus 로고    scopus 로고
    • Interaction-dependent gene expression in Mla-specified response to barley powdery mildew
    • Caldo, R. A., Nettleton, D., & Wise, R. P. (2004). Interaction-dependent gene expression in Mla-specified response to barley powdery mildew. The Plant Cell, 16, 2514-2528.
    • (2004) The Plant Cell , vol.16 , pp. 2514-2528
    • Caldo, R.A.1    Nettleton, D.2    Wise, R.P.3
  • 6
  • 10
    • 23044467579 scopus 로고    scopus 로고
    • A high-throughput gene-silencing system for the functional assessment of defense-related genes in barley epidermal cells
    • Douchkov, D., Nowara, D., Zierold, U., & Schweizer, P. (2005). A high-throughput gene-silencing system for the functional assessment of defense-related genes in barley epidermal cells. Molecular Plant-Microbe Interactions, 18, 755-761.
    • (2005) Molecular Plant-Microbe Interactions , vol.18 , pp. 755-761
    • Douchkov, D.1    Nowara, D.2    Zierold, U.3    Schweizer, P.4
  • 11
    • 33645002711 scopus 로고    scopus 로고
    • Macroarray expression analysis of barley susceptibility and nonhost resistance to Blumeria graminis
    • Eichmann, R., Biemelt, S., Schäfer, P., Scholz, U., Jansen, C., Felk, A., et al. (2006). Macroarray expression analysis of barley susceptibility and nonhost resistance to Blumeria graminis. Journal of Plant Physiology, 163, 657-670.
    • (2006) Journal of Plant Physiology , vol.163 , pp. 657-670
    • Eichmann, R.1    Biemelt, S.2    Schäfer, P.3    Scholz, U.4    Jansen, C.5    Felk, A.6
  • 13
    • 33748763016 scopus 로고    scopus 로고
    • First encounters-Deployment of defence-related natural products by plants
    • Field, B., Jordan, F., & Osbourn, A. (2006). First encounters-Deployment of defence-related natural products by plants. New Phytologist, 172, 193-207.
    • (2006) New Phytologist , vol.172 , pp. 193-207
    • Field, B.1    Jordan, F.2    Osbourn, A.3
  • 15
    • 24944436247 scopus 로고    scopus 로고
    • Contrasting mechanisms of defense against biotrophic and necrotrophic pathogens
    • Glazebrook, J. (2005). Contrasting mechanisms of defense against biotrophic and necrotrophic pathogens. Annual Review of Phytopathology, 43, 205-227.
    • (2005) Annual Review of Phytopathology , vol.43 , pp. 205-227
    • Glazebrook, J.1
  • 16
    • 44249086255 scopus 로고    scopus 로고
    • Penetration attempts by the powdery mildew fungus into barley leaves are accompanied by increased gene transcript accumulation in the epidermal cell layer
    • Gregersen, P. L., & Collinge, D. B. (2001). Penetration attempts by the powdery mildew fungus into barley leaves are accompanied by increased gene transcript accumulation in the epidermal cell layer. Journal of Plant Pathology, 83, 257-260.
    • (2001) Journal of Plant Pathology , vol.83 , pp. 257-260
    • Gregersen, P.L.1    Collinge, D.B.2
  • 17
    • 38249020955 scopus 로고
    • Early induction of new mRNAs accompanies the resistance reaction of barley to the wheat pathogen, Erysiphe graminis f.sp. tritici
    • Gregersen, P. L., Collinge, D. B., & Smedegaard-Petersen, V. (1990). Early induction of new mRNAs accompanies the resistance reaction of barley to the wheat pathogen, Erysiphe graminis f.sp. tritici. Physiological and Molecular Plant Pathology, 36, 471-481.
    • (1990) Physiological and Molecular Plant Pathology , vol.36 , pp. 471-481
    • Gregersen, P.L.1    Collinge, D.B.2    Smedegaard-Petersen, V.3
  • 18
    • 0031463325 scopus 로고    scopus 로고
    • Differential gene transcript accumulation in barley leaf epidermis and mesophyll in response to attack by Blumeria graminis f.sp. hordei (syn. Erysiphe graminis f.sp. hordei)
    • Gregersen, P. L., Thordal-Christensen, H., Forster, H., & Collinge, D. B. (1997). Differential gene transcript accumulation in barley leaf epidermis and mesophyll in response to attack by Blumeria graminis f.sp. hordei (syn. Erysiphe graminis f.sp. hordei). Physiological and Molecular Plant Pathology, 51, 85-97.
    • (1997) Physiological and Molecular Plant Pathology , vol.51 , pp. 85-97
    • Gregersen, P.L.1    Thordal-Christensen, H.2    Forster, H.3    Collinge, D.B.4
  • 19
    • 0032717491 scopus 로고    scopus 로고
    • Phytoalexins: What have we learned after 60 years?
    • Hammerschmidt, R. (1999). Phytoalexins: What have we learned after 60 years? Annual Review of Phytopathology, 37, 285-306.
    • (1999) Annual Review of Phytopathology , vol.37 , pp. 285-306
    • Hammerschmidt, R.1
  • 20
    • 12144291688 scopus 로고    scopus 로고
    • Characterisation of early transcriptional changes involving multiple signalling pathways in the Mla13 barley interaction with powdery mildew (Blumeria graminis f.sp. hordei)
    • Hein, I., Campbell, E. I., Woodhead, M., Hedley, P. E., Young, V., Morris, W., et al. (2004). Characterisation of early transcriptional changes involving multiple signalling pathways in the Mla13 barley interaction with powdery mildew (Blumeria graminis f.sp. hordei). Planta, 218, 803-813.
    • (2004) Planta , vol.218 , pp. 803-813
    • Hein, I.1    Campbell, E.I.2    Woodhead, M.3    Hedley, P.E.4    Young, V.5    Morris, W.6
  • 21
    • 26944493259 scopus 로고    scopus 로고
    • Virus-induced gene silencing-based functional characterization of genes associated with powdery mildew resistance in barley
    • Hein, I., Barciszewska-Pacak, M., Hrubikova, K., Williamson, S., Dinesen, M., Soenderby, I. E., et al. (2005). Virus-induced gene silencing-based functional characterization of genes associated with powdery mildew resistance in barley. Plant Physiology, 138, 2155-2164.
    • (2005) Plant Physiology , vol.138 , pp. 2155-2164
    • Hein, I.1    Barciszewska-Pacak, M.2    Hrubikova, K.3    Williamson, S.4    Dinesen, M.5    Soenderby, I.E.6
  • 24
    • 34848894548 scopus 로고    scopus 로고
    • The HvNAC6 transcription factor: A positive regulator of penetration resistance in barley and Arabidopsis
    • Jensen, M. K., Rung, J. H., Gregersen, P. L., Gjetting, T., Fuglsang, A. T., Hansen, M., et al. (2007). The HvNAC6 transcription factor: A positive regulator of penetration resistance in barley and Arabidopsis. Plant Molecular Biology, 65, 137-150.
    • (2007) Plant Molecular Biology , vol.65 , pp. 137-150
    • Jensen, M.K.1    Rung, J.H.2    Gregersen, P.L.3    Gjetting, T.4    Fuglsang, A.T.5    Hansen, M.6
  • 25
    • 0000637336 scopus 로고
    • Discovery, characterization and exploitation of Mlo powdery mildew resistance in barley
    • Jørgensen, J. H. (1992). Discovery, characterization and exploitation of Mlo powdery mildew resistance in barley. Euphytica, 63, 141-152.
    • (1992) Euphytica , vol.63 , pp. 141-152
    • Jørgensen, J.H.1
  • 26
    • 0028079119 scopus 로고
    • Genetics of powdery mildew resistance in barley
    • Jørgensen, J. H. (1994). Genetics of powdery mildew resistance in barley. Critical Reviews in Plant Sciences, 13, 97-119.
    • (1994) Critical Reviews in Plant Sciences , vol.13 , pp. 97-119
    • Jørgensen, J.H.1
  • 27
    • 0000017193 scopus 로고
    • Near-isogenic barley lines with genes for resistance to powdery mildew
    • Kølster, P., Munk, L., Stølen, O., & Løhde, J. (1986). Near-isogenic barley lines with genes for resistance to powdery mildew. Crop Science, 26, 903-907.
    • (1986) Crop Science , vol.26 , pp. 903-907
    • Kølster, P.1    Munk, L.2    Stølen, O.3    Løhde, J.4
  • 28
    • 0030627551 scopus 로고    scopus 로고
    • Differential display. a general protocol
    • Liang, P., & Pardee, A. B. (1997). Differential display. A general protocol. Methods Molecular Biology, 85, 3-11.
    • (1997) Methods Molecular Biology , vol.85 , pp. 3-11
    • Liang, P.1    Pardee, A.B.2
  • 30
    • 33846065315 scopus 로고    scopus 로고
    • A novel drought-inducible gene, ATAF1, encodes a NAC family protein that negatively regulates the expression of stress-responsive genes in Arabidopsis
    • Lu, P. L., Chen, N. Z., An, R., Su, Z., Qi, B. S., Ren, F., et al. (2006). A novel drought-inducible gene, ATAF1, encodes a NAC family protein that negatively regulates the expression of stress-responsive genes in Arabidopsis. Plant Molecular Biology, 63, 289-305.
    • (2006) Plant Molecular Biology , vol.63 , pp. 289-305
    • Lu, P.L.1    Chen, N.Z.2    An, R.3    Su, Z.4    Qi, B.S.5    Ren, F.6
  • 31
    • 24944444272 scopus 로고    scopus 로고
    • RNA silencing in productive virus infections
    • MacDiarmid, R. (2005). RNA silencing in productive virus infections. Annual Review of Phytopathology, 43, 523-544.
    • (2005) Annual Review of Phytopathology , vol.43 , pp. 523-544
    • MacDiarmid, R.1
  • 32
    • 0005055262 scopus 로고
    • Reduced translatable messenger RNA activities in leaves of barley infected with Erysiphe graminis f.sp. hordei
    • Manners, J. M., & Scott, K. J. (1985). Reduced translatable messenger RNA activities in leaves of barley infected with Erysiphe graminis f.sp. hordei. Physiological Plant Pathology, 26, 297-308.
    • (1985) Physiological Plant Pathology , vol.26 , pp. 297-308
    • Manners, J.M.1    Scott, K.J.2
  • 33
    • 33748690972 scopus 로고    scopus 로고
    • EcoTILLING for the identification of allelic variation in the powdery mildew resistance genes mlo and Mla of barley
    • Mejlhede, N., Kyjovska, Z., Backes, G., Burhenne, K., Rasmussen, S. K., & Jahoor, A. (2006). EcoTILLING for the identification of allelic variation in the powdery mildew resistance genes mlo and Mla of barley. Plant Breeding, 125, 461-467.
    • (2006) Plant Breeding , vol.125 , pp. 461-467
    • Mejlhede, N.1    Kyjovska, Z.2    Backes, G.3    Burhenne, K.4    Rasmussen, S.K.5    Jahoor, A.6
  • 35
    • 0036853182 scopus 로고    scopus 로고
    • Live and let live: Insights into powdery mildew disease and resistance
    • Panstruga, R., & Schulze-Lefert, P. (2002). Live and let live: Insights into powdery mildew disease and resistance. Molecular Plant Pathology, 3, 495-502.
    • (2002) Molecular Plant Pathology , vol.3 , pp. 495-502
    • Panstruga, R.1    Schulze-Lefert, P.2
  • 36
    • 0036017854 scopus 로고    scopus 로고
    • The genomics parade of defense responses: To infinity and beyond
    • Ramonell, K. M., & Somerville, S. (2002). The genomics parade of defense responses: To infinity and beyond. Current Opinion in Plant Biology, 5, 291-294.
    • (2002) Current Opinion in Plant Biology , vol.5 , pp. 291-294
    • Ramonell, K.M.1    Somerville, S.2
  • 38
    • 0034485993 scopus 로고    scopus 로고
    • Double-stranded RNA interferes with gene function at the single-cell level in cereals
    • Schweizer, P., Pokorny, J., Schulze-Lefert, P., & Dudler, R. (2000). Double-stranded RNA interferes with gene function at the single-cell level in cereals. The Plant Journal, 24, 895-903.
    • (2000) The Plant Journal , vol.24 , pp. 895-903
    • Schweizer, P.1    Pokorny, J.2    Schulze-Lefert, P.3    Dudler, R.4
  • 40
    • 33847254952 scopus 로고    scopus 로고
    • Nuclear activity of MLA immune receptors links isolate-specific and basal disease-resistance responses
    • Shen, Q. H., Saijo, Y., Mauch, S., Biskup, C., Bieri, S., Keller, B., et al. (2007). Nuclear activity of MLA immune receptors links isolate-specific and basal disease-resistance responses. Science, 315, 1098-1103.
    • (2007) Science , vol.315 , pp. 1098-1103
    • Shen, Q.H.1    Saijo, Y.2    Mauch, S.3    Biskup, C.4    Bieri, S.5    Keller, B.6
  • 41
    • 0032988757 scopus 로고    scopus 로고
    • Cell-autonomous complementation of mlo resistance using a biolistic transient expression system
    • Shirasu, K., Nielsen, K., Piffanelli, P., Oliver, R., & Schulze-Lefert, P. (1999). Cell-autonomous complementation of mlo resistance using a biolistic transient expression system. The Plant Journal, 17, 293-299.
    • (1999) The Plant Journal , vol.17 , pp. 293-299
    • Shirasu, K.1    Nielsen, K.2    Piffanelli, P.3    Oliver, R.4    Schulze-Lefert, P.5
  • 42
    • 0029960982 scopus 로고    scopus 로고
    • The no apical meristem gene of Petunia is required for pattern formation in embryos and flowers and is expressed at meristem and primordia boundaries
    • Souer, E., van Houwelingen, A., Kloos, D., Mol, J., & Koes, R. (1996). The no apical meristem gene of Petunia is required for pattern formation in embryos and flowers and is expressed at meristem and primordia boundaries. Cell, 85, 159-170.
    • (1996) Cell , vol.85 , pp. 159-170
    • Souer, E.1    Van Houwelingen, A.2    Kloos, D.3    Mol, J.4    Koes, R.5
  • 43
  • 45
    • 4544291936 scopus 로고    scopus 로고
    • Mechanistic and genetic overlap of barley host and non-host resistance to Blumeria graminis
    • Trujillo, M., Troeger, M., Niks, R. E., Kogel, K.-H., & Hückelhoven, R. (2004). Mechanistic and genetic overlap of barley host and non-host resistance to Blumeria graminis. Molecular Plant Pathology, 5, 389-396.
    • (2004) Molecular Plant Pathology , vol.5 , pp. 389-396
    • Trujillo, M.1    Troeger, M.2    Niks, R.E.3    Kogel, K.-H.4    Hückelhoven, R.5
  • 46
    • 8444247532 scopus 로고    scopus 로고
    • High-throughput screening of suppression subtractive hybridization cDNA libraries using DNA microarray analysis
    • van den Berg, N., Crampton, B. G., Hein, I., Birch, P. R. J., & Berger, D. K. (2004). High-throughput screening of suppression subtractive hybridization cDNA libraries using DNA microarray analysis. Biotechniques, 37, 818-824.
    • (2004) Biotechniques , vol.37 , pp. 818-824
    • Van Den Berg, N.1    Crampton, B.G.2    Hein, I.3    Birch, P.R.J.4    Berger, D.K.5
  • 47
    • 33748941620 scopus 로고    scopus 로고
    • Significance of inducible defense-related proteins in infected plants
    • van Loon, L. C., Rep, M., & Pieterse, C. M. J. (2006). Significance of inducible defense-related proteins in infected plants. Annual Review of Phytopathology, 44, 135-162.
    • (2006) Annual Review of Phytopathology , vol.44 , pp. 135-162
    • Van Loon, L.C.1    Rep, M.2    Pieterse, C.M.J.3
  • 48
    • 0035859046 scopus 로고    scopus 로고
    • Gene silencing as an adaptive defence against viruses
    • Waterhouse, P. M., Wang, M. B., & Lough, T. (2001). Gene silencing as an adaptive defence against viruses. Nature, 411, 834-842.
    • (2001) Nature , vol.411 , pp. 834-842
    • Waterhouse, P.M.1    Wang, M.B.2    Lough, T.3
  • 49
    • 6444238967 scopus 로고    scopus 로고
    • Large-scale analysis of the barley transcriptome based on expressed sequence tags
    • Zhang, H. N., Sreenivasulu, N., Weschke, W., Stein, N., Rudd, S., Radchuk, V., et al. (2004). Large-scale analysis of the barley transcriptome based on expressed sequence tags. Plant Journal, 40, 276-290.
    • (2004) Plant Journal , vol.40 , pp. 276-290
    • Zhang, H.N.1    Sreenivasulu, N.2    Weschke, W.3    Stein, N.4    Rudd, S.5    Radchuk, V.6
  • 50
    • 17644416113 scopus 로고    scopus 로고
    • Transcriptome analysis of mlo-mediated resistance in the epidermis of barley
    • Zierold, U., Scholz, U., & Schweizer, P. (2005). Transcriptome analysis of mlo-mediated resistance in the epidermis of barley. Molecular Plant Pathology, 6, 139-151.
    • (2005) Molecular Plant Pathology , vol.6 , pp. 139-151
    • Zierold, U.1    Scholz, U.2    Schweizer, P.3
  • 51
    • 10344260697 scopus 로고    scopus 로고
    • Host and non-host pathogens elicit different jasmonate/ethylene responses in Arabidopsis
    • Zimmerli, L., Stein, M., Lipka, V., Schulze-Lefert, P., & Somerville, S. (2004). Host and non-host pathogens elicit different jasmonate/ethylene responses in Arabidopsis. Plant Journal, 40, 633-646.
    • (2004) Plant Journal , vol.40 , pp. 633-646
    • Zimmerli, L.1    Stein, M.2    Lipka, V.3    Schulze-Lefert, P.4    Somerville, S.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.