메뉴 건너뛰기




Volumn 38, Issue 8-9, 2008, Pages 1065-1071

Development of a new PCR protocol for the detection of species and genotypes (strains) of Echinococcus in formalin-fixed, paraffin-embedded tissues

Author keywords

Austria; Echinococcus granulosus; Formalin fixed paraffin embedded tissues; Genotypes; Human hydatid disease; PCR

Indexed keywords

DNA FRAGMENT;

EID: 44149120091     PISSN: 00207519     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ijpara.2007.11.008     Document Type: Article
Times cited : (76)

References (35)
  • 1
    • 0348156244 scopus 로고    scopus 로고
    • Copro-diagnosis of Echinococcus granulosus infection in dags by amplification of a newly identified repeated DNA sequence
    • Abbasi I., Branzburg A., Campos-Ponce M., Hafez S., Raoul F., Craig P., and Hamburger J. Copro-diagnosis of Echinococcus granulosus infection in dags by amplification of a newly identified repeated DNA sequence. Am. J. Trop. Med. Hyg. 69 3 (2003) 324-330
    • (2003) Am. J. Trop. Med. Hyg. , vol.69 , Issue.3 , pp. 324-330
    • Abbasi, I.1    Branzburg, A.2    Campos-Ponce, M.3    Hafez, S.4    Raoul, F.5    Craig, P.6    Hamburger, J.7
  • 2
    • 33344477321 scopus 로고    scopus 로고
    • Characterization of Echinococcus granulosus isolates from human, sheep and camel in Iran
    • Ahmadi N., and Dalimi A. Characterization of Echinococcus granulosus isolates from human, sheep and camel in Iran. Infect. Genet. Evol. 6 2 (2006) 85-90
    • (2006) Infect. Genet. Evol. , vol.6 , Issue.2 , pp. 85-90
    • Ahmadi, N.1    Dalimi, A.2
  • 3
    • 0346250723 scopus 로고    scopus 로고
    • Human alveolar echinococcosis and cystic echinococcosis in Austria: the recent epidemiological situation
    • Auer H., and Aspöck H. Human alveolar echinococcosis and cystic echinococcosis in Austria: the recent epidemiological situation. Helminthologia 38 (2001) 3-14
    • (2001) Helminthologia , vol.38 , pp. 3-14
    • Auer, H.1    Aspöck, H.2
  • 4
    • 44149107728 scopus 로고    scopus 로고
    • Die zystische und die alveoläre Echinokokkose - Die gefährlichsten Helminthosen Mitteleuropas
    • Auer H., and Aspöck H. Die zystische und die alveoläre Echinokokkose - Die gefährlichsten Helminthosen Mitteleuropas. Denisia 6 (2002) 333-353
    • (2002) Denisia , vol.6 , pp. 333-353
    • Auer, H.1    Aspöck, H.2
  • 5
    • 0036653406 scopus 로고    scopus 로고
    • Combined eco-epidemiological and molecular biology approaches to assess Echinococcus granulosus transmission to humans in Mauritania: occurrence of the "camel" strain and human cystic echinococcosis
    • Bardonnet K., Piarroux R., Dia L., Schneegans F., Beurdeley A., Godot V., and Vuitton D.A. Combined eco-epidemiological and molecular biology approaches to assess Echinococcus granulosus transmission to humans in Mauritania: occurrence of the "camel" strain and human cystic echinococcosis. Trans. R. Soc. Trop. Med. Hyg. 96 (2002) 383-386
    • (2002) Trans. R. Soc. Trop. Med. Hyg. , vol.96 , pp. 383-386
    • Bardonnet, K.1    Piarroux, R.2    Dia, L.3    Schneegans, F.4    Beurdeley, A.5    Godot, V.6    Vuitton, D.A.7
  • 7
    • 0026675364 scopus 로고
    • Genetic variants within the genus Echinococcus identified by mitochondrial DNA sequencing
    • Bowles J., Blair D., and McManus D.P. Genetic variants within the genus Echinococcus identified by mitochondrial DNA sequencing. Mol. Biochem. Parasitol. 54 (1992) 165-173
    • (1992) Mol. Biochem. Parasitol. , vol.54 , pp. 165-173
    • Bowles, J.1    Blair, D.2    McManus, D.P.3
  • 8
    • 0027140265 scopus 로고
    • NADH dehydrogenase 1 gene sequences compared for species and strains of the genus Echinococcus
    • Bowles J., and McManus D.P. NADH dehydrogenase 1 gene sequences compared for species and strains of the genus Echinococcus. Int. J. Parasitol. 23 (1993) 969-972
    • (1993) Int. J. Parasitol. , vol.23 , pp. 969-972
    • Bowles, J.1    McManus, D.P.2
  • 9
    • 1842558644 scopus 로고    scopus 로고
    • A PCR system for detection of species and genotypes of the Echinococcus granulosus-complex, with reference to the epidemiological situation in eastern Africa
    • Dinkel A., Njoroge E.M., Zimmermann A., Wälz M., Zeyhle E., Elmahdi I.E., Mackenstedt U., and Romig T. A PCR system for detection of species and genotypes of the Echinococcus granulosus-complex, with reference to the epidemiological situation in eastern Africa. Int. J. Parasitol. 34 (2004) 645-653
    • (2004) Int. J. Parasitol. , vol.34 , pp. 645-653
    • Dinkel, A.1    Njoroge, E.M.2    Zimmermann, A.3    Wälz, M.4    Zeyhle, E.5    Elmahdi, I.E.6    Mackenstedt, U.7    Romig, T.8
  • 11
    • 0030939202 scopus 로고    scopus 로고
    • Intraspecific variation of Echinococcus granulosus and related species with emphasis on their infectivity to humans
    • Eckert J., and Thompson R.C. Intraspecific variation of Echinococcus granulosus and related species with emphasis on their infectivity to humans. Acta Trop. 64 (1997) 19-34
    • (1997) Acta Trop. , vol.64 , pp. 19-34
    • Eckert, J.1    Thompson, R.C.2
  • 12
    • 0031305882 scopus 로고    scopus 로고
    • Epidemiology of Echinococcus multilocularis and E. granulosus in central Europe
    • Eckert J. Epidemiology of Echinococcus multilocularis and E. granulosus in central Europe. Parassitologia 39 (1997) 337-344
    • (1997) Parassitologia , vol.39 , pp. 337-344
    • Eckert, J.1
  • 13
    • 10844294884 scopus 로고    scopus 로고
    • Usefulness of PCR analysis for diagnosis of alveolar echinococcosis with unusual localizations: two cases studies
    • Georges S., Villard O., Filisetti D., Mathis A., Marcellin L., Hansmann Y., and Candolfi E. Usefulness of PCR analysis for diagnosis of alveolar echinococcosis with unusual localizations: two cases studies. J. Clin. Microbiol. 42 (2004) 5954-5956
    • (2004) J. Clin. Microbiol. , vol.42 , pp. 5954-5956
    • Georges, S.1    Villard, O.2    Filisetti, D.3    Mathis, A.4    Marcellin, L.5    Hansmann, Y.6    Candolfi, E.7
  • 14
    • 0026207445 scopus 로고
    • PCR amplification from paraffin-embedded tissues: recommendations on fixatives for long-term storage and prospective studies
    • Greer C.E., Lund J.K., and Manos M.M. PCR amplification from paraffin-embedded tissues: recommendations on fixatives for long-term storage and prospective studies. PCR Methods Appl. 1 (1991) 46-50
    • (1991) PCR Methods Appl. , vol.1 , pp. 46-50
    • Greer, C.E.1    Lund, J.K.2    Manos, M.M.3
  • 15
    • 0036792829 scopus 로고    scopus 로고
    • Molecular and morphological characterization of Echinococcus granulosus of human and animal origin in Iran
    • Harandi M.F., Hobbs R.P., Adams P.J., Mobedi I., Morgan-Ryan U.M., and Thompson R.C. Molecular and morphological characterization of Echinococcus granulosus of human and animal origin in Iran. Parasitology 125 (2002) 367-373
    • (2002) Parasitology , vol.125 , pp. 367-373
    • Harandi, M.F.1    Hobbs, R.P.2    Adams, P.J.3    Mobedi, I.4    Morgan-Ryan, U.M.5    Thompson, R.C.6
  • 16
    • 0027216159 scopus 로고
    • Effects of fixation and varying target length on the sensitivity of polymerase chain reaction for detection of human T-cell leukemia virus type I proviral DNA in formalin-fixed tissue sections
    • Honma M., Ohara Y., Murayama H., Sako K., and Iwasaki Y. Effects of fixation and varying target length on the sensitivity of polymerase chain reaction for detection of human T-cell leukemia virus type I proviral DNA in formalin-fixed tissue sections. J. Clin. Microbiol. 31 (1993) 1799-1803
    • (1993) J. Clin. Microbiol. , vol.31 , pp. 1799-1803
    • Honma, M.1    Ohara, Y.2    Murayama, H.3    Sako, K.4    Iwasaki, Y.5
  • 17
    • 0030794294 scopus 로고    scopus 로고
    • DNA extraction from paraffin-embedded tissues using a salting-out procedure: a reliable method for PCR amplification of archival material
    • Howe J.R., Klimstra D.S., and Cordon-Cardo C. DNA extraction from paraffin-embedded tissues using a salting-out procedure: a reliable method for PCR amplification of archival material. Histol. Histopathol. 12 (1997) 595-601
    • (1997) Histol. Histopathol. , vol.12 , pp. 595-601
    • Howe, J.R.1    Klimstra, D.S.2    Cordon-Cardo, C.3
  • 18
    • 33746216114 scopus 로고    scopus 로고
    • Identification of bacteria in formalin-fixed, paraffin-embedded heart valve tissue via 16S rRNA gene nucleotide sequencing
    • Imrit K., Goldfischer M., Wang J., Green J., Levine J., Lombardo J., and Hong T. Identification of bacteria in formalin-fixed, paraffin-embedded heart valve tissue via 16S rRNA gene nucleotide sequencing. J. Clin. Microbiol. 44 (2006) 2609-2611
    • (2006) J. Clin. Microbiol. , vol.44 , pp. 2609-2611
    • Imrit, K.1    Goldfischer, M.2    Wang, J.3    Green, J.4    Levine, J.5    Lombardo, J.6    Hong, T.7
  • 19
    • 0035054305 scopus 로고    scopus 로고
    • Small bones from dried mammal museum specimens as a reliable source of DNA
    • 736
    • Iudica C.A., Whitten W.M., and Williams N.H. Small bones from dried mammal museum specimens as a reliable source of DNA. Biotechniques 30 (2001) 732-734 736
    • (2001) Biotechniques , vol.30 , pp. 732-734
    • Iudica, C.A.1    Whitten, W.M.2    Williams, N.H.3
  • 20
    • 25844525789 scopus 로고    scopus 로고
    • Emergence/re-emergence of Echinococcus spp. - a global update
    • Jenkins D.J., Romig T., and Thompson R.C. Emergence/re-emergence of Echinococcus spp. - a global update. Int. J. Parasitol. 35 (2005) 1205-1219
    • (2005) Int. J. Parasitol. , vol.35 , pp. 1205-1219
    • Jenkins, D.J.1    Romig, T.2    Thompson, R.C.3
  • 21
    • 0033868739 scopus 로고    scopus 로고
    • Echinococcus granulosus: DNA extraction from germinal layers allows strain determination in fertile and nonfertile hydatid cysts
    • Kamenetzky L., Canova S.G., Guarnera E.A., and Rosenzvit M.C. Echinococcus granulosus: DNA extraction from germinal layers allows strain determination in fertile and nonfertile hydatid cysts. Exp. Parasitol. 95 (2000) 122-127
    • (2000) Exp. Parasitol. , vol.95 , pp. 122-127
    • Kamenetzky, L.1    Canova, S.G.2    Guarnera, E.A.3    Rosenzvit, M.C.4
  • 22
    • 33845791450 scopus 로고    scopus 로고
    • Taxonomic position and geographical distribution of the common sheep G1 and camel G6 strains of Echinococcus granulosus in three African countries
    • Maillard S., Benchikh-Elfegoun M.C., Knapp J., Bart J.M., Koskei P., Gottstein B., and Piarroux R. Taxonomic position and geographical distribution of the common sheep G1 and camel G6 strains of Echinococcus granulosus in three African countries. Parasitol. Res. 100 (2007) 495-503
    • (2007) Parasitol. Res. , vol.100 , pp. 495-503
    • Maillard, S.1    Benchikh-Elfegoun, M.C.2    Knapp, J.3    Bart, J.M.4    Koskei, P.5    Gottstein, B.6    Piarroux, R.7
  • 23
    • 31944447180 scopus 로고    scopus 로고
    • Molecular discrimination of taeniid cestodes
    • McManus D.P. Molecular discrimination of taeniid cestodes. Parasitol. Int. 55 (2006) 31-37
    • (2006) Parasitol. Int. , vol.55 , pp. 31-37
    • McManus, D.P.1
  • 24
    • 0024284028 scopus 로고
    • A simple salting out procedure for extracting DNA from human nucleated cells
    • Miller S.A., Dykes D.D., and Polesky H.F. A simple salting out procedure for extracting DNA from human nucleated cells. Nucleic Acids Res. 16 (1988) 1215
    • (1988) Nucleic Acids Res. , vol.16 , pp. 1215
    • Miller, S.A.1    Dykes, D.D.2    Polesky, H.F.3
  • 27
    • 2542429516 scopus 로고    scopus 로고
    • Echinococcus granulosus strain differentiation based on sequence heterogeneity in mitochondrial genes of cytochrome c oxidase-1 and NADH dehydrogenase-1
    • Obwaller A., Schneider R., Walochnik J., Gollackner B., Deutz A., Janitschke K., Aspock H., and Auer H. Echinococcus granulosus strain differentiation based on sequence heterogeneity in mitochondrial genes of cytochrome c oxidase-1 and NADH dehydrogenase-1. Parasitology 128 (2004) 569-575
    • (2004) Parasitology , vol.128 , pp. 569-575
    • Obwaller, A.1    Schneider, R.2    Walochnik, J.3    Gollackner, B.4    Deutz, A.5    Janitschke, K.6    Aspock, H.7    Auer, H.8
  • 28
    • 1642336538 scopus 로고    scopus 로고
    • The pig strain of Echinococcus granulosus in humans: a neglected issue?
    • Pawlowski Z., and Stefaniak J. The pig strain of Echinococcus granulosus in humans: a neglected issue?. Trends Parasitol. 19 (2003) 439
    • (2003) Trends Parasitol. , vol.19 , pp. 439
    • Pawlowski, Z.1    Stefaniak, J.2
  • 29
    • 31944431916 scopus 로고    scopus 로고
    • The present situation of echinococcosis in Europe
    • Romig T., Dinkel A., and Mackenstedt U. The present situation of echinococcosis in Europe. Parasitol. Int. 55 (2006) 187-191
    • (2006) Parasitol. Int. , vol.55 , pp. 187-191
    • Romig, T.1    Dinkel, A.2    Mackenstedt, U.3
  • 30
    • 39049194725 scopus 로고    scopus 로고
    • Detection of genetic polymorphism among and within Echinococcus granulosus strains by heteroduplex analysis of a microsatellite from the U1 snRNA genes
    • Roratto P.A., Bartholomei-Santos M.L., Gutierrez A.M., Kamenetzky L., Rosenzvit M.C., and Zaha A. Detection of genetic polymorphism among and within Echinococcus granulosus strains by heteroduplex analysis of a microsatellite from the U1 snRNA genes. Genet. Mol. Res. 5 (2006) 542-552
    • (2006) Genet. Mol. Res. , vol.5 , pp. 542-552
    • Roratto, P.A.1    Bartholomei-Santos, M.L.2    Gutierrez, A.M.3    Kamenetzky, L.4    Rosenzvit, M.C.5    Zaha, A.6
  • 31
    • 0031025490 scopus 로고    scopus 로고
    • Molecular genetic analysis of human cystic hydatid cases from Poland: identification of a new genotypic group (G9) of Echinococcus granulosus
    • Scott J.C., Stefaniak J., Pawlowski Z.S., and McManus D.P. Molecular genetic analysis of human cystic hydatid cases from Poland: identification of a new genotypic group (G9) of Echinococcus granulosus. Parasitology 114 (1997) 37-43
    • (1997) Parasitology , vol.114 , pp. 37-43
    • Scott, J.C.1    Stefaniak, J.2    Pawlowski, Z.S.3    McManus, D.P.4
  • 32
    • 0343962562 scopus 로고    scopus 로고
    • Molecular evidence for the presence of a G7 genotype of Echinococcus granulosus in Slovakia
    • Šnabel V., D'Amelio S., Mathiopoulos K., Turcekova L., and Dubinsky P. Molecular evidence for the presence of a G7 genotype of Echinococcus granulosus in Slovakia. J. Helminthol. 74 (2000) 177-181
    • (2000) J. Helminthol. , vol.74 , pp. 177-181
    • Šnabel, V.1    D'Amelio, S.2    Mathiopoulos, K.3    Turcekova, L.4    Dubinsky, P.5
  • 33
    • 1542509877 scopus 로고    scopus 로고
    • Polymerase chain reaction for the detection of patent infections of Echinococcus granulosus ("sheep strain") in naturally infected dogs
    • Štefanič S., Shaikenov B.S., Deplazes P., Dinkel A., Torgerson P.R., and Mathis A. Polymerase chain reaction for the detection of patent infections of Echinococcus granulosus ("sheep strain") in naturally infected dogs. Parasitol. Res. 92 (2004) 347-351
    • (2004) Parasitol. Res. , vol.92 , pp. 347-351
    • Štefanič, S.1    Shaikenov, B.S.2    Deplazes, P.3    Dinkel, A.4    Torgerson, P.R.5    Mathis, A.6
  • 34
    • 0345073731 scopus 로고    scopus 로고
    • Morphological and genetic characterization of Echinococcus granulosus in the Slovak Republic
    • Turcekova L., Šnabel V., D'Amelio S., Busi M., and Dubinsky P. Morphological and genetic characterization of Echinococcus granulosus in the Slovak Republic. Acta Trop. 85 (2003) 223-229
    • (2003) Acta Trop. , vol.85 , pp. 223-229
    • Turcekova, L.1    Šnabel, V.2    D'Amelio, S.3    Busi, M.4    Dubinsky, P.5
  • 35
    • 0027215998 scopus 로고
    • Molecular examination of the sympatry and distribution of sheep and camel strains of Echinococcus granulosus in Kenya
    • Wachira T.M., Bowles J., Zeyhle E., and McManus D.P. Molecular examination of the sympatry and distribution of sheep and camel strains of Echinococcus granulosus in Kenya. Am. J. Trop. Med. Hyg. 48 (1993) 473-479
    • (1993) Am. J. Trop. Med. Hyg. , vol.48 , pp. 473-479
    • Wachira, T.M.1    Bowles, J.2    Zeyhle, E.3    McManus, D.P.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.