Thirteen nuclear microsatellite loci for butternut (Juglans cinerea L.)

Molecular Ecology Resources

Volumn 8, Issue 3, 2008, Pages 643-646

  Hoban, Sean ^a   Anderson, Robert ^b   Mccleary, Tim ^a   Schlarbaum, Scott ^c   Romero Severson, Jeanne ^a  

^a UNIVERSITY OF NOTRE DAME   (United States)

^b University of Tennessee Knoxville ^*  (United States)

^c UNIVERSITY OF TENNESSEE   (United States)

Author keywords

Butternut canker; Conservation genetics; Forest restoration; Tree improvement; Walnut culture

Indexed keywords

JUGLANS; JUGLANS CINEREA; SIROCOCCUS CLAVIGIGNENTI-JUGLANDACEARUM;

EID: 43949146254     PISSN: 1755098X     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1471-8286.2007.02030.x     Document Type: Article

References (18)

1. Altschul SF, Madden TL, Schaffer AA et al 1997) Gapped blast and psi-blast: a new generation of protein database search programs. Nucleic Acids Research, 25, 3389 3402.
2. Aradhya MK, Potter D, Simon CJ (2004) Origin, evolution, and biogeography of Juglans: a phylogenetic perspective. In : V. International Walnut Symposium, pp. 85 94. Acta Horticulturae, Sorrento, Italy.
3. Fjellstrom R, Parfitt D (1994) Walnut (Juglans spp.) genetic diversity determined by restriction fragment length polymorphisms. Genome 37.
4. Fleguel RV (1996) A Literature Review of Butternut and the Butternut Canker - Information Report no. 20. Ontario Ministry of Natural Resources. Brockville, Ontario.
5. Jones AG, Stockwell CA, Walker D, Avise JC (1998) The molecular basis of a microsatellite null allele from the white sands pupfish. Journal of Heredity, 89, 339 342.
6. Jones KC, Levine KF, Banks JD (2002) Characterization of 11 polymorphic tetranucleotide microsatellites for forensic applications in California elk (Cervus elaphus canadensis). Molecular Ecology Resources, 2, 425 427.
7. Kalinowski S, Taper M, Marshall T (2007) Revising how the computer program cervus accommodates genotyping error increases success in paternity assignment. Molecular Ecology, 16, 1099 1106.
8. Manning WE (1978) The classification within the Juglandaceae. Annals of the Missouri Botanical Garden, 65, 1058 1087.
9. Morin R, Beaulieu J, Deslauriers M, Daoust G, Bousquet J (2000) Low genetic diversity at allozyme loci in Juglans cinerea. Canadian Journal of Botany, 78, 1238 1243.
10. Nicese FP, Hormaza JI, McGranahan GH (1998) Molecular characterization and genetic relatedness among walnut (Juglans regia L.) genotypes based on RAPD markers. Euphytica 101, 199 206.
11. Ostry ME, Ellingson B, Seekins D, Ruckheim W (2002) The need for silvicultural practices and collection of butternut germplasm for species conservation. In : Proceedings, 13th Central Hardwood Forest Conference (eds Van Sambeek JW, Dawson JO, Ponder F, Loewenstein EF, Fralish JS). US Department of Agriculture, Forest Service, North Central Research Station, Urbana, Illinois.
12. Raymond M, Rousset F (1995) genepop (version 1.2): population genetics software for exact tests and ecumenicism. Journal of Heredity, 86, 248 249.
13. Rink G (1990) Juglans cinerea L. Butternut. In : Silvics of North America, 2. Hardwoods. Agriculture Handbook 654 (eds Burns RM, Honkala BH pp. 386 390. US Department of Agriculture, Forest Service, Washington, D.C.
14. Rozen S, Skaletsky HJ (2000) primer 3 on the WWW for general users and for biologist programmers. In : Bioinformatics Methods and Protocols: Methods in Molecular Biology (Eds Krawetz S, Misener S pp. 365 386. Humana Press, Totowa, New Jersey.
15. Schlarbaum SE, Anderson RL, Ostry ME et al 2004) Butternut conservation: understanding aspects of canker resistance for the development of breeding orchards. In : Forest Genetics and Tree Breeding in the Age of Genomics: Progress and Future, IUFRO Joint Conference of Division 2. North Carolina State University, Charleston, South Carolina.
16. Sokal RR, Rohlf FJ (1969) Biometry, pp. 715 717. W H Freeman, New York.
17. Van Oosterhout C, Hutchinson WF, Wills DPM, Shipley P (2004) micro-checker: software for identifying and correcting genotyping errors in microsatellite data. Molecular Ecology Resources, 4, 535 538.
18. Victory ER, Glaubitz JC, Rhodes OE Jr., Woeste KE (2006) Genetic homogeneity in Juglans nigra (Juglandaceae) at nuclear microsatellites. American Journal of Botany, 93, 118 126.