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Volumn , Issue , 2006, Pages 41-48

Seed-based genomic sequence comparison using a FPGA/FLASH accelerator

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHMS; BANDWIDTH; COMPUTATION THEORY; FIELD PROGRAMMABLE GATE ARRAYS (FPGA); FLASH MEMORY;

EID: 43749113173     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/FPT.2006.270389     Document Type: Conference Paper
Times cited : (26)

References (19)
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    • (2005) ACM Computing Surveys (CSUR) , vol.37 , Issue.2 , pp. 138-163
    • Gal, E.1    Toledo, S.2
  • 9
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
    • S.F. Altschul et al., Gapped BLAST and PSI-BLAST: a new generation of protein database search programs, Nucleic Acids Res., 25:3389-3402, 1997
    • (1997) Nucleic Acids Res , vol.25 , pp. 3389-3402
    • Altschul, S.F.1
  • 10
    • 0031457974 scopus 로고    scopus 로고
    • Hardware Accelerator for Biological Sequence Comparison
    • SAMBA
    • P. Guerdoux, D. Lavenier, SAMBA: Hardware Accelerator for Biological Sequence Comparison, CABIOS, vol 13, no 6, 1997
    • (1997) CABIOS , vol.13 , Issue.6
    • Guerdoux, P.1    Lavenier, D.2
  • 14
    • 0023989064 scopus 로고
    • Improved tools for biological sequence comparison
    • W.R. Pearson, D.J. Lipman, Improved tools for biological sequence comparison, Proc. Natl. Acad. Sci., 85:3244-3248, 1988
    • (1988) Proc. Natl. Acad. Sci , vol.85 , pp. 3244-3248
    • Pearson, W.R.1    Lipman, D.J.2
  • 15
    • 0020484488 scopus 로고
    • An Improved Algorithm for Matching Biological Sequence
    • O. Gotoh, An Improved Algorithm for Matching Biological Sequence, J. Mol. Biol., 162:705-708, 1982
    • (1982) J. Mol. Biol , vol.162 , pp. 705-708
    • Gotoh, O.1
  • 16
    • 0019887799 scopus 로고    scopus 로고
    • T.F. Smith, M.S. Waterman, Identification of common molecular subsequences, J. Mol. Biol. 147-195-197, 1981
    • T.F. Smith, M.S. Waterman, Identification of common molecular subsequences, J. Mol. Biol. 147-195-197, 1981
  • 17
    • 0015960104 scopus 로고
    • The String-to-String Correction Problem
    • R.A. Wagner and M.J. Fischer, The String-to-String Correction Problem, Journal of the ACM, 21(1):168-173, 1974
    • (1974) Journal of the ACM , vol.21 , Issue.1 , pp. 168-173
    • Wagner, R.A.1    Fischer, M.J.2
  • 19
    • 40949127605 scopus 로고    scopus 로고
    • K9W8G08U1M Samsung, 1G × 8 Bit NAND Flash Memory Datasheet
    • K9W8G08U1M Samsung, 1G × 8 Bit NAND Flash Memory Datasheet, http://www.samsung.com


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.