Quantitative disease resistance assessment by real-time PCR using the Stagonospora nodorum-wheat pathosystem as a model

Plant Pathology

Volumn 57, Issue 3, 2008, Pages 527-532

  Oliver, R P ^a   Rybak, K ^a   Shankar, M ^b   Loughman, R ^b   Harry, N ^b   Solomon, P S ^a  

^a MURDOCH UNIVERSITY   (Australia)

^b DEPARTMENT OF AGRICULTURE AND FOOD WESTERN AUSTRALIA   (Australia)

Author keywords

Breeding for disease resistance; Glume blotch of wheat; Stagonospora leaf blotch; Triticum aestivum

Indexed keywords

ASSESSMENT METHOD; BIOMASS; CULTIVAR; DISEASE RESISTANCE; FUNGAL DISEASE; FUNGUS; PATHOGEN; POLYMERASE CHAIN REACTION; WHEAT;

PHAEOSPHAERIA NODORUM; STAGONOSPORA; TRITICUM AESTIVUM;

EID: 43749096101     PISSN: 00320862     EISSN: 13653059     Source Type: Journal    
DOI: 10.1111/j.1365-3059.2007.01787.x     Document Type: Article

References (54)

1. Badawy H, Hoppe H, Koch E, 1991. Differential reactions between the genus Brassica and aggressive single spore isolates of Leptosphaeria maculans. Journal of Phytopathology 131, 109 19.
2. Ballinger D, Salisbury P, 1996. Seedling and adult plant evaluation of race variability in Leptosphaeria maculans on Brassica species in Australia. Australian Journal of Experimental Agriculture 36, 485 8.
3. Bearchell SJ, Fraaije BA, Shaw MW, Fitt BDL, 2005. Wheat archive links long-term fungal pathogen population dynamics to air pollution. Proceedings of the National Academy of Sciences, USA 102, 5438 42.
4. Bhathal J, Loughman R, Speijers J, 2003. Yield reduction in wheat in relation to leaf disease from yellow (tan) spot and septoria nodorum blotch. European Journal of Plant Pathology 109, 435 43.
5. Cooke BM, Fitzgerald W, 1982. Use of detached leaves for screening barley cultivars to Septoria nodorum. Annals of Applied Biology 100, 98 9.
6. Czembor PC, Arseniuk E, Czaplicki A, Song Q, Cregan PB, Ueng PP, 2003. QTL mapping of partial resistance in winter wheat to Stagonospora nodorum blotch. Genome 46, 546 54.
7. Doohan FM, Parry DW, Nicholson P, 1999. Fusarium ear blight of wheat: the use of quantitative PCR and visual disease assessment in studies of disease control. Plant Pathology 48, 209 17.
8. Fitt BDL, Brun H, Barbetti MJ, Rimmer SR, 2006. World-wide importance of phoma stem canker (Leptosphaeria maculans and L. biglobosa) on oilseed rape (Brassica napus). European Journal of Plant Pathology 114, 3 15.
9. Fraaije BA, Lovell DJ, Coelho JM, Baldwin S, Hollomon DW, 2001. PCR-based assays to assess wheat varietal resistance to blotch (Septoria tritici and Stagonospora nodorum) and rust (Puccinia striiformis and Puccinia recondita) diseases. European Journal of Plant Pathology 107, 905 17.
10. Fried PM, 1989. Improved method to produce large quantities of Septoria nodorum inoculum. In : Fried P, ed. Proceedings of the Third International Workshop on Septoria Diseases of Cereals, 1989. Zurich-Reckenholz, Switzerland : Swiss Federal Research Station for Agronomy.
11. Friesen TL, Stukenbrock EH, Liu ZH et al., 2006. Emergence of a new disease as a result of interspecific virulence gene transfer. Nature Genetics 38, 953 6.
12. Griffiths HM, Jones DG, Akers A, 1985. A bioassay for predicting the resistance of wheat leaves to Septoria nodorum. Annals of Applied Biology 107, 293 300.
13. Guo JR, Schnieder F, Verreet JA, 2006. Presymptomatic and quantitative detection of Mycosphaerella graminicola development in wheat using a real-time PCR assay. FEMS Microbiology Letters 262, 223 9.
14. Hammond KE, Lewis BG, Musa TM, 1985. A systemic pathway in the infection of oilseed rape plants by Leptosphaeria maculans. Plant Pathology 34, 557 65.
15. Hewett PD, 1975. Septoria nodorum on seedlings and stubble of winter wheat. Transactions of the British Mycological Society 65, 7 18.
16. Hoffland E, van Beusichem ML, Jeger MJ, 1999. Nitrogen availability and susceptibility of tomato leaves to Botrytis cinerea. Plant and Soil 210, 263 72.
17. Hoffland E, Jeger MJ, van Beusichem ML, 2000. Effect of nitrogen supply rate on disease resistance in tomato depends on the pathogen. Plant and Soil 218, 239 47.
18. Howlett BJ, Idnurm A, Pedras MSC, 2001. Leptosphaeria maculans, the causal agent of blackleg disease of Brassicas. Fungal Genetics & Biology 33, 1 14.
19. James WC, 1971. An illustrated series of assessment keys for plant diseases, their preparation and usage. Canadian Plant Disease Survey 51, 39 65.
20. Jensen B, Munk L, 1997. Nitrogen-induced changes in colony density and spore production of Erysiphe graminis f.sp. hordei on seedlings of six spring barley cultivars. Plant Pathology 46, 191 202.
21. Jiang G, Dong Y, Lewis J, Siler L, Ward R, 2006. Characterization of resistance to Fusarium graminearum in a recombinant inbred line population of wheat; resistance to fungal spread, mycotoxin accumulation, and grain yield loss, and trait relationships. Crop Science 46, 2590 7.
22. Karjalainen R, Laitinen A, 1982. Screening for resistance of spring wheat to Septoria nodorum. Nordisk Jordbrugsforskning 64, 232 3.
23. Kianianmomeni A, Schwarz G, Felsenstein FG, Wenzel G, 2007. Validation of a real-time PCR for the quantitative estimation of a G143A mutation in the cytochrome bc1 gene of Pyrenophora teres. Pest Management Science 63, 219 24.
24. Knott D, Talukdar B, 1971. Increasing seed weight in wheat and its effect on yield, yield components, and quality. Crop Science 11, 280 3.
25. Liu Z, Friesen T, Ling H et al., 2006. The Tsn1-ToxA interaction in the wheat-Stagonospora nodorum pathosystem parallels that of the wheat-tan spot system. Genome 49, 1265 73.
26. Liu ZH, Faris JD, Meinhardt SW, Ali S, Rasmussen JB, Friesen TL, 2004a. Genetic and physical mapping of a gene conditioning sensitivity in wheat to a partially purified host-selective toxin produced by Stagonospora nodorum. Phytopathology 94, 1056 60.
27. Liu ZH, Friesen TL, Rasmussen JB, Ali S, Meinhardt SW, Faris JD, 2004b. Quantitative trait loci analysis and mapping of seedling resistance to Stagonospora nodorum leaf blotch in wheat. Phytopathology 94, 1061 7.
28. Loughman R, Wilson RE, Thomas GJ, 1993. The influence of disease complexes involving Leptosphaeria (Septoria) nodorum on detection of resistance to 3 leaf-spot diseases in wheat. Euphytica 72, 31 42.
29. Loughman R, Wilson RE, Thomas GJ, 1996. Components of resistance to Mycosphaerella graminicola and Phaeosphaeria nodorum in spring wheats. Euphytica 89, 377 85.
30. Martin R, James D, Levesque CA, 2000. Impacts of molecular diagnostic techniques on plant disease management. Annual Review of Phytopathology 38, 207 39.
31. McCartney HA, Foster SJ, Fraaije BA, Ward E, 2003. Molecular diagnostics for fungal plant pathogens. Pest Management Science 59, 129 42.
32. McIntosh R, Wellings C, Park R, 1995. Wheat Rusts: An Atlas of Resistance Genes. Dordrecht, the Netherlands & CSIRO Australia : Kluwer Academic Publishers.
33. Mebrate SA, Cooke BM, 2001. Response of wheat cultivars to infection by Stagonospora nodorum isolates mixture on detached and intact seedling leaves. Euphytica 122, 263 8.
34. Milus E, Line R, 1986. Number of genes controlling high temperature, adult-plant resistance to stripe rust in wheat. Phytopathology 76, 93 6.
35. Morzfeld J, Koopmann B, Hoppe HH, 2004. Development of fungicide resistance of wheat and barley pathogens against strobilurins: a methodological approach. Journal of Plant Diseases and Protection 111, 105 14.
36. Mumford R, Boonham N, Tomlinson J, Barker I, 2006. Advances in molecular phytodiagnostics - new solutions for old problems. European Journal of Plant Pathology 116, 1 19.
37. Nass HG, Johnston HW, 1985. Evaluation of methods and criteria for identifying resistance to Septoria nodorum in spring wheat. Canadian Journal of Plant Pathology 7, 91 7.
38. Nelson LR, Marshall D, 1990. Breeding wheat for resistance to Septoria nodorum and Septoria tritici. Advances in Agronomy 44, 257 77.
39. Nicholson P, Turner AS, Edwards SG et al., 2002. Development of stem-base pathogens on different cultivars of winter wheat determined by quantitative PCR. European Journal of Plant Pathology 108, 163 77.
40. Nicholson P, Chandler E, Draeger RC et al., 2003. Molecular tools to study epidemiology and toxicology of fusarium head blight of cereals. European Journal of Plant Pathology 109, 691 703.
41. O'Reilly P, Bannon E, Doyle A, 1988. Timing of fungicide applications in relation to the development of Septoria nodorum in winter wheat. Proceedings of the British Crop Protection Conference-Pests and Diseases. Farnham, UK : BCPC, 929 34.
42. Oliver RP, Farman ML, Jones JDG, Hammond-Kosack KE, 1993. Use of fungal transformants expressing beta-glucuronidase activity to detect infection and measure hyphal biomass in infected plant tissues. Molecular Plant-Microbe Interactions 6, 521 5.
43. Palmer CL, Skinner W, 2002. Mycosphaerella graminicola: latent infection, crop devastation and genomics. Molecular Plant Pathology 3, 63 70.
44. Rufty RC, Hebert TT, Murphy CF, 1981. Evaluation of resistance to Septoria nodorum in wheat. Plant Disease 65, 406 9.
45. Schots A, Dewey FM, Oliver RP, 1994. Modern Assays for Plant Pathogenic Fungi: Identification, Detection and Quantification. Wallingford, UK : CAB International.
46. Scott PR, Benedikz PW, 1977. Field techniques for assessing the reaction of winter wheat cultivars to Septoria nodorum. Annals of Applied Biology. 85, 345 58.
47. Shah DA, Bergstrom GC, Sorrells ME, 2000. Differential seed infection of wheat cultivars by Stagonospora nodorum. Plant Disease 84, 749 52.
48. Sierotzki H, Frey R, Wullschleger J et al., 2007. Cytochrome b gene sequence and structure of Pyrenophora teres and P. tritici-repentis and implications for QoI resistance. Pest Management Science 63, 225 33.
49. Solomon PS, Tan K-C, Oliver RP, 2003. The nutrient supply of pathogenic fungi; a fertile field for study. Molecular Plant Pathology 4, 203 10.
50. Solomon PS, Lowe RGT, Tan K-C, Waters ODC, Oliver RP, 2006a. Stagonospora nodorum: cause of stagonospora nodorum blotch of wheat. Molecular Plant Pathology 7, 147 56.
51. Solomon PS, Wilson TJG, Rybak K, Parker K, Lowe RGT, Oliver RP, 2006b. Structural characterisation of the interaction between Triticum aestivum and the dothideomycete pathogen Stagonospora nodorum. European Journal of Plant Pathology 114, 275 82.
52. Walther H, 1990. An improved assessment procedure for breeding for resistance to Septoria. Plant Breeding 105, 53 61.
53. Wicki W, Messmer M, Winzeler M, Stamp P, Schmid JE, 1999a. In vitro screening for resistance against Septoria nodorum blotch in wheat. Theoretical and Applied Genetics 99, 1273 80.
54. Wicki W, Winzeler M, Schmid JE, Stamp P, Messmer M, 1999b. Inheritance of resistance to leaf and glume blotch caused by Septoria nodorum Berk. in winter wheat. Theoretical and Applied Genetics 99, 1265 72.