Partitioning total spectral absorption in phytoplankton and colored detrital material contributions

Limnology and Oceanography: Methods

Volumn 5, Issue 11, 2007, Pages 384-395

  Oubelkheir, Kadija ^a,b   Claustre, Hervé ^a   Bricaud, Annick ^a   Babin, Marcel ^a  

^a SORBONNE UNIVERSITÉ   (France)

^b PLYMOUTH MARINE LABORATORY   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ALGAE;

EID: 43649085602     PISSN: None     EISSN: 15415856     Source Type: Journal    
DOI: 10.4319/lom.2007.5.384     Document Type: Article

References (28)

1. Babin, M., D. Stramski, G.M. Ferrari, H. Claustre, A. Bricaud, G. Obolensky, and N. Hoepffner. 2003. Variations in the light absorption coefficients of phytoplankton, nonalgal particles, and dissolved organic matter in coastal waters around Europe. J. Geophys. Res. 108:10.1029/2001JC000882.
2. Boss, E., and others. 2001a. Spectral particulate attenuation and particle size distribution in the bottom boundary layer of a continental shelf. J. Geophys. Res. 106:9509-9516.
3. Boss, E., M. S. Twardowski, and S. Herring. 2001b. Shape of the particulate beam attenuation spectrum and its inversion to obtain the shape of the particulate size distribution. Appl. Opt. 40:4885-4893.
4. Bricaud, A., H. Claustre, J. Ras, and K. Oubelkheir. 2004. Natural variability of phytoplanktonic absorption in oceanic waters: influence of the size structure of algal populations. J. Geophys. Res. 109:C11010, doi:10.1029/2004JC002419.
5. Bricaud, A., A. Morel, M. Babin, K. Allali, and H. Claustre. 1998. Variations of light absorption by suspended particles with chlorophyll a concentration in oceanic (case 1) waters: Analysis and implications for bio-optical models. J. Geophys. Res. 103:31033-31044.
6. Bricaud, A., A. Morel, and L. Prieur. 1981. Absorption by dissolved organic matter of the sea (yellow substance) in the UV and visible domains. Limnol. Oceanogr. 26:43-53.
7. Bricaud, A., and D. Stramski. 1990. Spectral absorption coefficients of living phytoplankton and nonalgal biogenous matter: A comparison between the Peru upwelling area and the Sargasso Sea. Limnol. Oceanogr. 35:562-582.
8. Chang, G.C., and T.D. Dickey. 1999. Partitioning in situ total spectral absorption by use of moored spectral absorptionattenuation meters. Appl. Opt. 38:3876-3887.
9. Ciotti, A.M., M.R. Lewis, and J.J. Cullen. 2002. Assessment of the relationships between dominant cell size in natural phytoplankton communities and the spectral shape of the absorption coefficient. Limnol. Oceanogr. 47:404-417.
10. Ciotti, A.M., and A. Bricaud. 2006. Retrievals of a size parameter for phytoplankton and spectral light absorption by Colored Detrital Matter from water-leaving radiances at SeaWiFS channels in a continental shelf region off Brazil. Limnol. Oceanogr. Meth. 4:237-253.
11. Claustre, H., F. Fell, K. Oubelkheir, L. Prieur, A. Sciandra, B. Gentili, and M. Babin. 2000. Continuous monitoring of surface optical properties across a geostrophic front: Biogeochemical inferences. Limnol. Oceanogr. 45:309-321.
12. Davies-Colley, R.J. 1992. Yellow substance in coastal and marine waters round the South Island, New Zealand. New Zeal. J. Mar. Freshwater Res. 26:311-322.
13. Dickey, T. 2003. Emerging ocean observations for interdisciplinary data assimilation systems. J. Mar. Sys. 40-41:5-48.
14. Ferrari, G.M., and S. Tassan. 1999. A method using chemical oxidation to remove light absorption by phytoplankton pigments. J. Phycol. 35:1090-1098.
15. Gallegos, C.L., and P.J. Neale. 2002. Partitioning spectral absorption in case 2 waters: discrimination of dissolved and particulate components. Appl. Opt. 41:42204232.
16. Kishino, M., M. Takahashi, N. Okami, and S. Ichimura. 1985. Estimation of the spectral absorption coefficients of phytoplankton in the sea. Bulletin of Marine Science. 37:634-642.
17. Lee, Z.P., and K.L. Carder. 2003. Absorption spectrum of phytoplankton pigments derived from hyperspectral remotesensing reflectance. Remote Sens. Environ. 89:361-368.
18. Loisel, H., and D. Stramski. 2000. Estimation of inherent optical properties of natural waters from irradiance attenuation coefficient and reflectance in the presence of Raman scattering. Appl. Opt. 39:3001-3011.
19. Moore, C. 1994. In-situ, biochemical, oceanic, optical meters. Sea Technology 35:10-16.
20. Morrow, J.H., W.S. Chamberlin, and D.A. Kiefer. 1989. A twocomponent description of spectral absorption by marine particles. Limnol. Oceanogr. 34:1500-1509.
21. Oubelkheir, K., A. Sciandra, and M. Babin. 2005. Bio-optical and biogeochemical properties of different trophic regimes in oceanic waters. Limnol. Oceanogr. 50:1795-1809.
22. Prieur, L. and S. Sathyendranath. 1981. An optical classification of coastal and oceanic waters based on the specific spectral absorption curves of phytoplankton pigments, dissolved organic matter, and other particulate materials. Limnol. Oceanogr. 26:671-689.
23. Roesler, C.S., M.J. Perry, and K.L. Carder. 1989. Modeling in situ phytoplankton absorption from total absorption spectra in productive inland marine waters. Limnol. Oceanogr. 34:1510-1523.
24. Schofield, O., T. Bergmann, M.J. Oliver, A. Irwin, G.J. Kirkpatrick, W.P. Bissett, M. Moline, and C. Orrico. 2004. Inversion of spectral absorption in the optically complex coastal waters of the Mid-Atlantic bight. J. Geophys. Res. 109:IC12S04, doi: 10.1029/2003JC002071.
25. Siegel, D.A., S. Maritorena, N.B. Nelson, D.A. Hansell, and M. Lorenzi-Kayser. 2002. Global distribution and dynamics of colored dissolved and detrital organic materials. J. Geophys. Res. 107:21.
26. Siegel, D.A., and A.F. Michaels. 1996. Quantification of non-algal attenuation in the Sargasso Sea: Implications for biogeochemistry and remote sensing. Deep-Sea Res. II 43: 321-345.
27. Twardowski, M.S., and P.L. Donaghay. 2001. Separating in situ and terrigenous sources of absorption by dissolved materials in coastal waters. J. Geophys. Res. 106:2545-2560.
28. Zaneveld, J.R.V., C. Moore, A.H. Barnard, M. Twardowski, and G. Chang. 2004. Correction and analysis of spectral absorption data taken with the WETLabs AC-S. Ocean Optics XVII. Proceedings of the SPIE.