The use of gas-phase substrates to study enzyme catalysis at low hydration

Philosophical Transactions of the Royal Society B: Biological Sciences

Volumn 359, Issue 1448, 2004, Pages 1309-1320

  Dunn, Rachel V ^a   Daniel, Roy M ^a   Ho, M W ^b   Halling, P J ^c   Chaplin, M F ^d   Zaccai, G ^e   Finney, J L ^f  

^a UNIVERSITY OF WAIKATO   (New Zealand)

^b Institute of Science in Society   (United Kingdom)

^c UNIVERSITY OF STRATHCLYDE   (United Kingdom)

^d LONDON SOUTH BANK UNIVERSITY   (United Kingdom)

^e INSTITUT DE BIOLOGIE STRUCTURALE   (France)

^f UNIVERSITY COLLEGE LONDON   (United Kingdom)

Author keywords

Gas phase catalysis; Protein hydration; Water

Indexed keywords

ENZYME;

CANDIDA;

EID: 4344588356     PISSN: 09628436     EISSN: None     Source Type: Journal    
DOI: 10.1098/rstb.2004.1494     Document Type: Conference Paper

References (47)

1. Acker, L. 1962 Enzymic reactions in foods of low moisture content. Adv. Food Res. 11, 263-330.
2. Babor, M., Sobolev, V. & Edelman, M. 2002 Conserved positions for ribose recognition: importance of water bridging interactions among ATP, ADP and FAD-protein complexes. J. Mol. Biol. 323, 523-532.
3. Baker, E. & Hubbard, R. 1984 Hydrogen bonding in globular proteins. Prog. Biophys. Mol. Biol. 44, 97-179.
4. Barzana, E., Klibanov, A. & Karel, M. 1987 Enzyme-catalyzed, gas-phase reactions. Appl. Biochem. Biotechnol. 15, 25-34.
5. Barzana, E., Karel, M. & Klibanov, A. 1989 Enzymatic oxidation of ethanol in the gaseous phase. Biotechnol. Bioengng 34, 1178-1185.
6. Bone, S. 1996 Dielectric and gravimetric studies of water binding to lysozyme. Phys. Med. Biol. 41, 1265-1275.
7. Bousquet-Dubouch, M.-P., Graber, M., Sousa, N., Lamare, S. & Legoy, M.-D. 2001 Alcoholysis catalyzed by Candida antarctica lipase B in a gas/solid system obeys a Ping Pong Bi Bi mechanism with competitive inhibition by the alcohol substrate and water. Biochim. Biophys. Acta 1550, 90-99.
8. Cameron, P., Davison, B., Frymier, P. & Barton, J. 2002 Direct transesterification of gases by 'dry' immobilized lipase. Biotechnol. Bioengng 78, 251-256.
9. Careri, G. 1999 Collective effects in hydrated proteins. In Hydration processes in biology: theoretical and experimental approaches (ed. M.-C. Bellissent-Funel), pp. 143-155. The Netherlands: IOS Press.
10. Careri, G., Giansanti, A. & Gratton, E. 1979 Lysozyme film hydration events: an IR and gravimetric study. Biopolymers 18, 1187-1203.
11. Careri, G., Gratton, E., Yang, P.-H. & Rupley, J. 1980 Correlation of IR spectroscopic, heat capacity, diamagnetic susceptibility and enzymatic measurements on lysozyme powder. Nature 284, 572-573.
12. Chen, L. 2000 Thermophilic enzymes and their impact on milk powders during storage. PhD thesis, University of Waikato, Hamilton.
13. Creighton, T. 1993 Proteins - structures and molecular properties. New York: Freeman.
14. Drapron, R. 1985 Enzyme activity as a function of water activity. In Properties of water in foods (ed. D. Simatos & J. Multon), pp. 171-190. Dordrecht, The Netherlands: Martinus Nijhoff Publishers.
15. Dravis, B., LeJeune, K., Metro, A. & Russell, A. 2000 Enzymatic dehalogenation of gas phase substrates with haloalkane dehalogenase. Biotechnol. Bioengng 69, 235-241.
16. Finney, J. 1996 Hydration processes in biological and macromolecular systems. Faraday Discuss. 103, 1-18.
17. Finney, J. & Poole, P. 1984 Protein hydration and enzyme activity: the role of hydration-induced conformation and dynamic changes in the activity of lysozyme. Comments Mol. Cell. Biophys. 2, 129-151.
18. Franks, F. 1993 Protein hydration. In Protein biotechnology (ed. F. Franks), pp. 437-465. Totawa, NJ: The Humana Press Inc.
19. Golton, I. 1980 An experimental and theoretical study of the interaction between water and a globular protein. University of London.
20. Graber, M., Bousquet-Dubouch, M.-P., Sousa, N., Lamare, S. & Legoy, M.-D. 2003 Water plays a different role on activation thermodynamic parameters of alcoholysis reaction catalyzed by lipase in gaseous and organic media. Biochim. Biophys. Acta 1645, 56-62.
21. Gronenborn, A. & Clore, M. 1997 Water in and around proteins. Biochemist 19, 18-21.
22. Hwang, S., Trantolo, D. & Wise, D. 1993 Gas phase acetaldehyde production in a continuous bioreactor. Biotechnol. Bioengng 42, 667-673.
23. Khurgin, Y., Medvedeva, N. & Roslyakov, V. 1977 Solid-state enzymatic reactions. II. Chymotrypsin hydrolysis of N-succinyl-L-phenylalanine n-nitroanilide. Biofizika 22, 1010-1014.
24. Kornblatt, J. & Kornblatt, J. 1997 The role of water recognition and catalysis by enzymes. Biochemist 19, 14-17.
25. Lamare, S. & Legoy, M.-D. 1993 Biocatalysis in the gas phase. Trends Biotechnol. 11, 413-418.
26. Lamare, S. & Legoy, M. 1995 Working at controlled water activity in a continuous process: the gas/solid system as a solution. Biotechnol. Bioengng 45, 387-397.
27. Lüscher-Mattli, M. 1986 Thermodynamic parameters of biopolymer-water systems. In Thermodynamic data for biochemistry and biotechnology (ed. H.-J. Hinz), pp. 276-296. Berlin: Springer.
28. Lüscher-Mattli, M. & Rüegg, M. 1982 Thermodynamic function of biopolymer hydration. I. Their determination by vapor pressure studies, discussed in an analysis of the primary hydration process. Biopolymers 21, 403-418.
29. Meyer, E. 1992 Internal water molecules and H-bonding in biological macromolecules: a review of structural features with functional implications. Protein Sci. 1, 1543-1562.
30. Nakasako, M., Odaka, M., Yohda, M., Dohmae, N., Takio, K. N. & Endo, I. 1999 Tertiary and quarternary structures of photoreactive Fe-type nitrile hydratase from Rhodococcus sp. N-177: roles of hydration water molecules in stabilizing the structures and the structural origin of the substrate specificity of the enzyme. Biochemistry 38, 9887-9898.
31. Parvaresh, F., Robert, H., Thomas, D. & Legoy, M.-D. 1992 Gas phase transesterification reactions catalyzed by lipolytic enzymes. Biotechnol. Bioengng 39, 467-473.
32. Pocker, Y. 2000 Water in enzyme reactions: biophysical aspects of hydration-dehydration processes. Cell. Mol. Life Sci. 57, 1008-1017.
33. Rupley, J. & Careri, G. 1991 Protein hydration and function. Adv. Protein Chem. 41, 37-172.
34. Rupley, J., Yang, P.-H. & Tollin, G. 1980 Thermodynamic and related studies of water interacting with proteins. In Water in polymers - ACS Symp. Ser. 127 (ed. S. Rowland), pp. 111-132. Washington, DC: American Chemical Society.
35. Rupley, J., Gratton, E. & Careri, G. 1983 Water and globular proteins. Trends Biochem. Sci. 8, 18-22.
36. Russell, A. & Yang, F. 1996 Catalyse gas-phase reactions with enzymes. CHEMTECH 26, 24-27.
37. Schinkel, J., Downer, N. & Rupley, J. 1985 Hydrogen exchange of lysozyme powders. Hydration dependence of internal motions. Biochemistry 24, 352-366.
38. Shamblin, S., Hancock, B. & Zografi, G. 1998 Water vapor sorption by peptides, proteins and their formulations. Eur. J. Pharm. Biopharm. 45, 239-247.
39. Skujins, J. & McLaren, A. 1967 Enzyme reaction rates at limited water activities. Science 158, 1569-1570.
40. Smith, A., Shirazi, H. & Mulligan, S. 2002 Water sorption isotherms and enthalpies of water sorption by lysozyme using the quartz crystal microbalance/heat conduction calorimeter. Biochim. Biophys. Acta 1594, 150-159.
41. Stevens, E. & Stevens, L. 1979 The effect of restricted hydration on the rate of reaction of glucose 6-phosphate dehydrogenase, phosphoglucose isomerase, hexokinase and fumarase. Biochem. J. 179, 161-167.
42. Valivety, R., Halling, P. & Macrae, A. 1992 Rhizomucor miehei lipase remains highly active at water activity below 0.0001. FEBS Lett. 301, 258-260.
43. Williams, M., Goodfellow, J. & Thornton, J. 1994 Buried waters and internal cavities in monomeric proteins. Protein Sci. 3, 1224-1235.
44. Yagi, T., Tsuda, M., Mori, Y. & Inokuchi, H. 1969 Hydrogenase activity in the dry state. J. Am. Chem. Soc. 91, 2801.
45. Yang, F. & Russell, A. 1995 The role of hydration in enzyme activity: 1. Water adsorption by alcohol dehydrogenase in a continuous gas phase reactor. Biotechnol. Bioengng 49, 700-708.
46. Yang, F. & Russell, A. 1996 The role of hydration in enzyme activity and stability: 2. Alcohol dehydrogenase activity and stability in a continuous gas phase reactor. Biotechnol. Bioengng 49, 709-716.
47. Zaks, A. & Klibanov, A. 1988 Enzymatic caalysis in nonaqueous solvents. J. Biol. Chem. 263, 3194-3201.