A comparative study of the genetic bases of natural variation in tomato leaf, sepal, and petal morphology

Theoretical and Applied Genetics

Volumn 109, Issue 3, 2004, Pages 523-533

  Frary, Amy ^a   Fritz, Lisa A ^a   Tanksley, Steven D ^b  

^a MOUNT HOLYOKE COLLEGE   (United States)

^b Cornell University ^*  (United States)

Author keywords

[No Author keywords available]

Indexed keywords

GENES; PLANTS (BOTANY); VEGETATION;

FLORAL MORPHOLOGY; LYCOPERSICON; QUANTITATIVE TRAIT LOCI (QTL);

GENETIC ENGINEERING;

LYCOPERSICON; LYCOPERSICON ESCULENTUM; LYCOPERSICON PENNELLII; SOLANACEAE; SOLANUM MELONGENA;

EID: 4344566456     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-004-1669-x     Document Type: Article

References (42)

1. Alpert KB, Grandillo S, Tanksley SD (1995) fw2.2: a major QTL controlling fruit weight is common to both red- and green-fruited tomato species. Theor Appl Genet 91:994-1000
2. Arber A (1950) The natural philosophy of plant form. Cambridge University Press, Cambridge
3. Avivi Y, Lev-Yadun S, Morozova N, Libs L, Williams L, Zhao J, Varghese G, Grafi G (2000) Clausa, a tomato mutant with a wide range of phenotypic perturbations, displays a cell type-dependent expression of the homeobox gene LeT6/TKn2. Plant Physiol 124:541-551
4. Ben Chaim A, Paran I, Grube RC, Jahn M, van Wijk R, Peleman J (2001) QTL mapping of fruit-related traits in pepper (Capsicum annuum). Theor Appl Genet 102:1016-1028
5. Bemacchi D, Beck-Bunn T, Eshed Y, Lopez J, Petiard V, Uhlig J, Zamir D, Tanksley S (1998) Advanced backcross QTL analysis in tomato. I. Identification of QTLs for traits of agronomic importance from Lycopersicon hirsutum. Theor Appl Genet 97:381-397
6. Bharathan G, Sinha NR (2001) The regulation of compound leaf development. Plant Physiol 127:1533-1538
7. Bradshaw HD Jr, Otto KG, Frewen BE, McKay JK, Schemske DW (1998) Quantitative trait loci affecting differences in floral morphology between two species of monkeyflower (Mimulus). Genetics 149:367-382
8. Chen J-J, Janssen B-J, Williams A, Sinha N (1997) A gene fusion at a homeobox locus: alterations in leaf shape and implications for morphological evolution. Plant Cell 9:1289-1304
9. Coen ES, Meyerowitz EM (1991) The war of the whorls: genetic interactions controlling flower development. Nature 353:31-37
10. Dengler N (1984) Comparison of leaf development in normal (+/+), entire (e/e), and lanceolate (La/+) plants of tomato, Lycopersicon esculentum 'Ailsa Craig'. Bot Gaz 145:66-77
11. deVicente MC, Tanksley SD (1993) QTL analysis of transgressive segregation in an interspecific tomato cross. Genetics 134:585-596
12. Eshed Y, Zamir D (1995) An introgression line population of Lycopersicon pennellii in the cultivated tomato enables the identification and fine mapping of yield-associated QTL. Genetics 141:1147-1162
13. Frary A, Nesbitt TC, Frary A, Grandillo S, van der Knaap E, Cong B, Liu J, Meller J, Elber R, Alpert KB, Tanksley SD (2000) fw2.2: a quantitative trait locus key to the evolution of tomato fruit size. Science 289:85-88
14. Frary A, Doganlar S, Daunay MC, Tanksley SD (2003) QTL analysis of morphological traits in eggplant and implications for conservation of gene function during evolution of solanaceous species. Theor Appl Genet 107:359-370
15. Fulton TM, Beck-Bunn T, Emmatty D, Eshed Y, Lopez J, Petiard V, Uhlig J, Zamir Z, Tanksley SD (1997) QTL analysis of an advanced backcross of Lycopersicon peruvianum to the cultivated tomato and comparisons with QTLs found in other wild species. Theor Appl Genet 95:881-894
16. Fulton TM, Grandillo S, Beck-Bunn T, Fridman E, Frampton A, Lopez J, Petiard V, Uhlig J, Zamir D, Tanksley SD (2000) Advanced backcross QTL analysis of a Lycopersicon esculentum x Lycopersicon parviflorum cross. Theor Appl Genet 100:1025-1042
17. Fulton TM, Van der Hoeven R, Eanetta NT, Tanksley SD (2002) Identification, analysis and utilization of conserved ortholog set markers for comparative genomics in higher plants. Plant Cell 14:1457-1467
18. Grandillo S, Tanksley SD (1996) QTL analysis of horticultural traits differentiating the cultivated tomato from the closely related species Lycopersicon pimpinellifolium. Theor Appl Genet 92:935-951
19. Grandillo S, Ku HM, Tanksley SD (1999) Identifying the loci responsible for natural variation in fruit size and shape in tomato. Theor Appl Genet 99:978-987
20. Hareven D, Gutfinger T, Parnis A, Eshed Y, Lifschitz E (1996) The making of a compound leaf: genetic manipulation of leaf architecture in tomato. Cell 84:735-744
21. Janssen B-J, Lund L, Sinha N (1998) Overexpression of a homeobox gene, LeT6, reveals indeterminate features of the tomato compound leaf. Plant Physiol 117:771-786
22. Jiang C, Wright RJ, Woo SS, DelMonte TA, Paterson AH (2000) QTL analysis of leaf morphology in tetraploid Gossypium (cotton). Theor Appl Genet 100:409-418
23. Juenger T, Purugganan M, Mackay TFC (2000) Quantitative trait loci for floral morphology in Arabidopsis thaliana. Genetics 156:1379-1392
24. Kessler S, Kim M, Pham T, Weber N, Sinha N (2001) Mutations altering leaf morphology in tomato. Int J Plant Sci 162:475-492
25. Lander ES, Botstein D (1989) Mapping Mendelian factors underlying quantitative traits using RFLP linkage maps. Genetics 121:185-199
26. Lander ES, Green P, Abraham J, Barlow A, Daly MJ, Lincoln SE, Newburg L (1987) MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1:174-181
27. Lippman Z, Tanksley SD (2001) Dissecting the genetic pathway to extreme fruit size in tomato using a cross between the small-fruited wild species Lycopersicon pimpinellifolium and L. esculentum var. giant heirloom. Genetics 158:413-422
28. Liu J, Van Eck J, Cong B, Tanksley SD (2002) A new class of regulatory genes underlying the cause of pear-shaped tomato fruit. Proc Natl Acad Sci USA 99:13302-13306
29. Luckwill LC (1943) The genus Lycopersicon, an historical, biological, and taxonomic survey of the wild and cultivated tomatoes. Aberdeen University Studies, Scotland, No. 120
30. MacArthur JW (1934) Fruit size effects of qualitative genes in tomato. Am Nat 58:73-74
31. Nelson JC (1997) QGENE: software for marker-based genomic analysis and breeding. Mol Breed 3:239-245
32. Pamis A, Cohen O, Gutfinger T, Hareven D, Zamir D, Lifschitz E (1997) The dominant developmental mutants of tomato, Mouse-ear and Curl, are associated with distinct modes of abnormal transcriptional regulation of a Knotted gene. Plant Cell 9:2143-2158
33. Pnueli L, Abu-Abeid M, Zamir D, Nacken W, Schwarz-Sommer Z, Lifschitz E (1991) The MADS-box gene family in tomato: temporal expression during floral development, conserved secondary structures and homology with homeotic genes from Antirrhinum and Arabidopsis. Plant J 1:255-266
34. Pnueli L, Hareven D, Rounsley SD, Yanofsky MF, Lifschitz E (1994a) Isolation of the tomato AGAMOUS gene TAG1 and analysis of its homeotic role in transgenic plants. Plant Cell 6:163-173
35. Pnueli L, Hareven D, Broday L, Hurwitz C, Lifschitz E (1994b) The TM5 MADS-box gene mediates organ differentiation in the three inner whorls of tomato flowers. Plant Cell 6:175-186
36. Rick CM, Tanksley SD (1981) Genetic variation in Solanum pennellii: comparisons with two other sympatric tomato species. Pl Syst Evol 139:11-45
37. Stevens AM, Rick CM (1986) Genetics and breeding. In: Atherton JG, Rudnick J (eds) The tomato crop. Chapman and Hall, New York, pp 35-109
38. Tanksley SD, Grandillo S, Fulton TM, Zamir D, Eshed Y, Petiard V, Lopez J, Beck-Bunn T (1996) Advanced backcross QTL analysis in a cross between an elite processing line of tomato and its wild relative L. pimpinellifolium. Theor Appl Genet 92:213-224
39. Wikstrom N, Savolainen V, Chase MW (2001) Evolution of the angiosperms: calibrating the family tree. Proc R Soc Lond B Biol Sci 268:2211-2220
40. Wu RL (2000) Quantitative genetic variation of leaf size and shape in a mixed diploid and triploid population of Populus. Genet Res Camb 75:215-222
41. Wu R, Bradshaw HD Jr, Stettler RF (1997) Molecular genetics of growth and development in Populus (Salicaceae). V. Mapping quantitative trait loci affecting leaf variation. Am J Bot 84:143-153
42. Yeager AF (1937) Studies on the inheritance and development of fruit size and shape in tomato. J Agric Res 55:141-152