Genetic admixture and diversity estimations in the Mexican Mestizo population from Mexico City using 15 STR polymorphic markers

Forensic Science International: Genetics

Volumn 2, Issue 3, 2008, Pages

  Juárez Cedillo, Teresa ^a   Zuñiga, Joaquín ^b   Acuña Alonzo, Victor ^c   Pérez Hernández, Nonanzit ^d   Rodríguez Pérez, José Manuel ^d   Barquera, Rodrigo ^c   Gallardo, Guillermo J ^d   Sánchez Arenas, Rosalinda ^a   García Peña, Maria del Carmen ^a   Granados, Julio ^e   Vargas Alarcón, Gilberto ^d  

^a INSTITUTO MEXICANO DEL SEGURO SOCIAL   (Mexico)

^b HARVARD MEDICAL SCHOOL   (United States)

^c INSTITUTO NACIONAL DE ANTROPOLOGÍA E HISTORIA   (Mexico)

^d INSTITUTO NACIONAL DE CARDIOLOGÍA IGNACIO CHÁVEZ   (Mexico)

^e INSTITUTO NACIONAL DE CIENCIAS MÉDICAS Y NUTRICIÓN SALVADOR ZUBIRÁN   (Mexico)

Author keywords

Admixture estimation; Frequency; Mexicans; Population genetics; STR

Indexed keywords

AFRICAN AMERICAN; AMERICAN INDIAN; ARTICLE; COMPARATIVE STUDY; CONTROLLED STUDY; EUROPEAN AMERICAN; FORENSIC GENETICS; FORENSIC IDENTIFICATION; GENE LOCUS; GENETIC ANALYSIS; GENETIC LINKAGE; GENETIC VARIABILITY; HUMAN; MARKER GENE; MEXICO; POPULATION GENETICS; POWER ANALYSIS; PRIORITY JOURNAL; SAMPLING; SHORT TANDEM REPEAT;

AFRICAN CONTINENTAL ANCESTRY GROUP; ALLELES; ANALYSIS OF VARIANCE; DNA FINGERPRINTING; EUROPEAN CONTINENTAL ANCESTRY GROUP; GENE FREQUENCY; GENETIC MARKERS; GENETIC VARIATION; GENETICS, POPULATION; GENOTYPE; HUMANS; INDIANS, NORTH AMERICAN; MEXICO; MICROSATELLITE REPEATS; POLYMORPHISM, GENETIC; QUALITY CONTROL; REFERENCE STANDARDS; URBAN POPULATION;

EID: 43049165673     PISSN: 18724973     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.fsigen.2007.08.017     Document Type: Article

References (20)

1. Guo S.W., and Thompson E.A. Performing the exact test of Hardy-Weinberg proportion for multiple alleles. Biometrics 48 (1992) 361-372
2. Schneider S., Roessli D., and Excoffier L. Arlequin ver 2.000: A Software for Population Genetics Data Analysis, Genetics and Biometry Laboratory (2005), University of Geneva, Switzerland
3. Tereba A. Tools for Analysis of Population Statistics Profiles in DNA (1999), Promega Corp.
4. Wang L. Maximum likelihood estimation of admixture proportions from genetic data. Genetics 164 (2003) 747-765
5. Sanz P., Prieto V., Flores I., Torres Y., Lopez-Soto M., and Farfan M.J. Population data of 13 STRS in Southern Spain (Andalusia). Forensic Sci. Int. 119 (2003) 113-115
6. ® 16 system kit. Forensic Sci. Int. 129 (2002) 78-80
7. Barrot C., Sanchez C., Ortega M., Gonzalez-Martin A., Brand-Casadevall C., Gorostiza A., Huguet E., Corbella J., and Gene M. Characterization of three Amerindian populations from Hidalgo State (Mexico) by 15 STR-PCR polymorphisms. Int. J. Legal Med. 119 (2005) 111-115
8. Hernández-Gutiérrez S., Hernández-Franco P., Martínez-Tripp S., Ramos-Kuri M., and Rangel-Villalobos H. STR data for 15 loci in a population sample from the central region of Mexico. Forensic Sci. Int. 151 (2005) 97-100
9. Cerda-Flores R.M., Villalobos-Torres M.C., Barrera-Saldaña H.A., Cortés-Prieto L.M., Barajas L.O., Rivas F., Carracedo A., Zhong Y., Barton S.A., and Chakraborty R. Genetic admixture in three Mexican Mestizo populations based on D1S80 and HLA-DQA1 loci. Am. J. Hum. Biol. 14 (2002) 257-263
10. Lisker R., Pérez-Briceño R., Granados J., Babinsky V., de Rubens J., Armendares S., and Buentello L. Gene frequencies and admixture estimates in a Mexico City population. Am. J. Phys. Anthropol. 71 (1986) 203-207
11. Lisker R., Pérez-Briceño R., Granados J., and Babinsky V. Gene frequencies and admixture estimates in the state of Puebla, Mexico. Am. J. Phys. Anthropol. 76 (1988) 331-335
12. Lisker R., Ramirez E., Pérez-Briceño R., Granados J., and Babinsky V. Gene frequencies and admixture estimates in four Mexican urban centers. Hum. Biol. 62 (1990) 791-801
13. Butler J.M., Schoske R., Vallone P.M., Redman J.W., and Kline M.C. Allele frequencies for 15 autosomal STR loci on U.S. Caucasian, African American and Hispanic populations. J. Forensic Sci. 48 (2003) 1-4
14. Zuniga J., Ilzarbe M., Acunha-Alonso V., Rosetti F., Herbert Z., Romero V., Almeciga I., Clavijo O., Stern J.N., Granados J., Fridkis-Hareli M., Morrison P., Azocar J., and Yunis E.J. Allele frequencies for 15 autosomal STR loci and admixture estimates in Puerto Rican Americans. Forensic Sci. Int. 164 (2006) 266-270
15. Budowle B., and Moretti T.R. Genotype profiles for six population groups at the 13 CODIS short tandem repeat core loci and other PCR based loci. Forensic Sci. Commun. 1 (1999). http://www.fbi.gov/hq/lab/fsc/backissu/july1999/budowle.htm
16. Rosenberg N.A., Pritchard J.K., Weber J.L., Cann H.M., Kidd K.K., Zhivotovsky L.A., and Feldman M.W. Structure of human populations. Science 298 (2002) 2381-2385
17. Edwards A., Civitello A., Hammond H.A., and Caskey C.T. DNA typing and genetic mapping with trimeric and tetrameric tandem repeats. Am. J. Hum. Genet. 49 (2001) 746-756
18. Gill P. DNA as evidence-the technology of identification. N. Eng. J. Med. 352 (2005) 2669-2671
19. Dobbins F. Disease transfer contact. Ann. Rev. Anthropol. 22 (1993) 273-291
20. Lincoln P., and Carracedo A. Publication of population data of human polymorphisms. Forensic Sci. Int. 110 (2000) 3-5