Molecular cloning and structural organization of the gene encoding the mouse lysosomal di-N-acetylchitobiase (ctbs)

Gene

Volumn 416, Issue 1-2, 2008, Pages 85-91

  Balducci, Chiara ^a   Bibi, Lucia ^a   Berg, Thomas ^b   Persichetti, Emanuele ^a   Tiribuzi, Roberto ^a   Martino, Sabata ^a   Paciotti, Silvia ^a   Roberti, Rita ^a   Orlacchio, Aldo ^a   Beccari, Tommaso ^a  

^a UNIVERSITY OF PERUGIA   (Italy)

^b UNIVERSITY OF TROMSØ   (Norway)

Author keywords

Chitobiase; Glycosidase; Lysosome; Promoter

Indexed keywords

N ACETYL BETA GLUCOSAMINIDASE; N ACETYLGLUCOSAMINE; OLIGOSACCHARIDE;

ANIMAL CELL; ARTICLE; CONTROLLED STUDY; GENE EXPRESSION; GENE ISOLATION; GENE SEQUENCE; GENE STRUCTURE; GENETIC CODE; GENETIC TRANSCRIPTION; LYSOSOME; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN EXPRESSION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION;

ACETYLGLUCOSAMINIDASE; ANIMALS; BASE SEQUENCE; CATTLE; CERCOPITHECUS AETHIOPS; CLONING, MOLECULAR; COS CELLS; LYSOSOMES; MICE; MOLECULAR SEQUENCE DATA; PROMOTER REGIONS (GENETICS); TRANSFECTION;

BOS; BOVINAE; CAPRA HIRCUS;

EID: 43049157942     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.gene.2008.03.009     Document Type: Article

References (25)

1. Aronson Jr. N.N., and Kuranda M. Lysosomal degradation of Asn-linked glycoproteins. FASEB J. 3 (1989) 2615-2622
2. Aronson N.N., Backes M., and Kuranda M.J. Rat liver chitobiase: purification, properties, and role in the lysosomal degradation of Asn-linked glycoproteins. Arch. Biochem. Biophys. 272 (1989) 290-300
3. Boot R.G., Bussink A.P., Verhoek M., de Boer P.A.J., and Moorman A.F.M. Marked differences in tissue-specific expression of chitinases in mouse and man. J. Histochem. Cytochem. 53 10 (2005) 1283-1292
4. Bradford M.M. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principles of protein dye-ligand. Anal. Biochem. 12 (1976) 248-254
5. Daniel P.F., Winchetser B., and Warren C.D. Mammalian alpha-mannosidases-multiple forms but a common purpose. Glycobiology 4 (1994) 551-566
6. Della Fazia M.A., Beccari T., Servillo G., Viola-Magni M.P., and Orlacchio A. Different expression of beta-N-acetylhexosaminidase in mouse tissues. Biochem. Biophys. Res. Commun. 199 (1994) 1341-1346
7. Fisher K.J., and Aronson Jr. N.N. Cloning and expression of the cDNA sequence encoding the lysosomal glycosidase Di-N-acetylchitobiase. J. Biol. Chem. 267 (1992) 19607-19616
8. Henrissat B., and Bairoch A. Updating the sequence-based classification of glycosyl hydrolases. Biochem. J. 316 (1996) 695-696
9. Kozak M. The scanning model for translation: an update. J. Cell Biol. 108 (1989) 229-241
10. Lassar A.B., et al. MyoD is a sequence-specific DNA binding protein requiring a region of myc homology to bind to the muscle creatine kinase enhancer. Cell 58 (1989) 823-831
11. Liu B., Ahmad W., and Aronson Jr. N.N. Structure of the human gene for lysosomal di-N-acetylchitobiase. Glycobiology 9 (1999) 589-593
12. Monzingo A.F., Marcotte E.M., Hart P.J., and Robertus J.D. Chitinases, chitosanases, and lysozymes can be divided into prokaryotic and eukaryotic families sharing a conserved core. Nat. Struct. Biol. 3 2 (1996) 133-140
13. Nicholson R.C., Mader S., Nagpal S., Leid M., Rochette E.C., and Chambon P. Negative regulation of the rat stromelysin gene promoter by retinoic acid is mediated by an API binding site. EMBO J. 9 (1990) 4443-4454
14. Nielsen H., Engelbrecht J., Brunak S., and von Heijne G. Identification of prokaryotic signal peptides and prediction of their cleavage sites. Protein Eng. 10 (1997) 1-6
15. Padgett R.A., Grabowski P.J., Konarska M.M., Seiler S., and Sharp P.A. Splicing of messenger RNA precursor. Ann. Rev. Biochem. 55 (1986) 1119-1150
16. Park C., et al. Characterization of a human core-specific lysosomal α1-6mannosidase involved in N-glycan catabolism. J. Biol. Chem. 280 (2005) 37204-37216
17. Peirson S.N., Butler J.N., and Foster R.G. Experimental validation of novel and conventional approaches to quantitative real-time PCR data analysis. Nucleic Acids Res. 31 14 (2003) e73
18. Quandt K., Frech K., Karas H., Wingender E., and Werner T. MatInd and MatInspector - new fast and versatile tools for detection of consensus matches in nucleotide sequence data. Nucleic Acids Res. 23 (1995) 4878-4884
19. Ramakers C., Ruijter J.M., Lekanne Deprez R.H., and Moorman A.F.M. Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data. Neurosci. Lett. 339 (2003) 62-66
20. Rudnicki M.A., and Jaenisch R. The MyoD family of transcription factors and skeletal myogenesis. BioEssays 17 (1995) 203-209
21. Schefe J.H., Lehmann K.E., Buschmann I.R., Unger T., and Funke-Kaiser H. Quantitative real-time RT-PCR data analysis: current concepts and the novel "gene expression's CT difference" formula. J. Mol. Med. 84 11 (2006) 901-910
22. Stirling J.L. Human N-acetyl-beta-hexosaminidase: hydrolysis of N,N′ diacetylchitobiose by a low molecular weight enzyme. FEBS Lett. 39 (1974) 171-175
23. Thomas, G.H., 2001. Disorders of glycoprotein degradation: alpha-mannosidosis, beta-mannosidosis, fucosidosis, and sialidosis. In The Metabolic and Molecular Basis of Inherited Disease, 8edn (Scriver CR, Beaudet AL, Valle D, Sly WS, eds; Childs B, Kinzler KW, Vogelstein B, assoc eds), pp 2529-2561. McGraw-Hill, NY.
24. White N.L., Higgins C.F., and Trezise A.E.O. Tissue-specific in vivo transcription start site of the human and murine cystic fibrosis genes. Hum. Mol. Genet. 7 (1998) 363-369
25. Wingender E., et al. TRANSFAC: an integrated system for gene expression regulation. Nucleic Acids Res. 28 (2000) 316-319