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Volumn 13, Issue 1-2, 2008, Pages 91-109

DARN! A weighted constraint solver for RNA motif localization

Author keywords

DARN; NcRNA; RNA motif localization

Indexed keywords

COMPUTER AIDED SOFTWARE ENGINEERING; DATA STRUCTURES; GENES; OPTIMIZATION; PATTERN MATCHING;

EID: 42749097747     PISSN: 13837133     EISSN: 15729354     Source Type: Journal    
DOI: 10.1007/s10601-007-9033-9     Document Type: Article
Times cited : (18)

References (19)
  • 3
    • 0029986908 scopus 로고    scopus 로고
    • Palingol: A declarative programming language to describe nucleic acids' secondary structures and to scan sequence database
    • 8
    • Billoud, B., Kontic, M., & Viari, A. (1996). Palingol: A declarative programming language to describe nucleic acids' secondary structures and to scan sequence database. Nucleic Acids Research, 24(8), 1395-1403.
    • (1996) Nucleic Acids Research , vol.24 , pp. 1395-1403
    • Billoud, B.1    Kontic, M.2    Viari, A.3
  • 4
    • 0030831182 scopus 로고    scopus 로고
    • Genetic and physical maps of Saccharomyces cerevisiae
    • 6632 Suppl
    • Cherry, J., Ball, C., Weng, S., Juvik, G., Schmidt, R., Adler, C., et al. (1997). Genetic and physical maps of Saccharomyces cerevisiae. Nature, 387(6632 Suppl), 67-73.
    • (1997) Nature , vol.387 , pp. 67-73
    • Cherry, J.1    Ball, C.2    Weng, S.3    Juvik, G.4    Schmidt, R.5    Adler, C.6
  • 7
    • 0028272315 scopus 로고
    • RNA sequence analysis using covariance models
    • 11
    • Eddy, S., & Durbin, R. (1994). RNA sequence analysis using covariance models. Nucleic Acids Research, 22(11), 2079-2088.
    • (1994) Nucleic Acids Research , vol.22 , pp. 2079-2088
    • Eddy, S.1    Durbin, R.2
  • 10
    • 4644326185 scopus 로고    scopus 로고
    • Solving weighted CSP by maintaining arc-consistency
    • 1-2
    • Larrosa, J., & Schiex, T. (2004). Solving weighted CSP by maintaining arc-consistency. Artificial Intelligence, 159(1-2), 1-26.
    • (2004) Artificial Intelligence , vol.159 , pp. 1-26
    • Larrosa, J.1    Schiex, T.2
  • 11
    • 0002437554 scopus 로고
    • Consistency techniques for numeric CSPs
    • Lhomme, O. (1993). Consistency techniques for numeric CSPs. In IJCAI-93 (pp. 232-238).
    • (1993) IJCAI-93 , pp. 232-238
    • Lhomme, O.1
  • 14
    • 0014757386 scopus 로고
    • A general method applicable to the search for similarities in the amino acid sequence of two proteins
    • 3
    • Needleman, S., & Wunsch, C. (1970). A general method applicable to the search for similarities in the amino acid sequence of two proteins. Journal of Molecular Biology, 48(3), 443-453.
    • (1970) Journal of Molecular Biology , vol.48 , pp. 443-453
    • Needleman, S.1    Wunsch, C.2
  • 15
    • 0000637803 scopus 로고
    • Recent methods for RNA modeling using stochastic context-free grammars
    • Sakakibara, Y., Brown, M., Hughey, R., Mian, I., Sjölander, K., Underwood, R., et al. (1994). Recent methods for RNA modeling using stochastic context-free grammars. In CPM'94 (pp. 289-306).
    • (1994) CPM'94 , pp. 289-306
    • Sakakibara, Y.1    Brown, M.2    Hughey, R.3    Mian, I.4    Sjölander, K.5    Underwood, R.6
  • 16
    • 33748672893 scopus 로고    scopus 로고
    • Searching RNA motifs and their intermolecular contacts with constraint networks
    • 17
    • Thébault, P., de Givry, S., Schiex, T., & Gaspin, C. (2006). Searching RNA motifs and their intermolecular contacts with constraint networks. Bioinformatics, 22(17), 2074-2080.
    • (2006) Bioinformatics , vol.22 , pp. 2074-2080
    • Thébault, P.1    De Givry, S.2    Schiex, T.3    Gaspin, C.4
  • 17
    • 0346339714 scopus 로고    scopus 로고
    • On the computational complexity of 2-interval pattern matching problems
    • 2-3
    • Vialette, S. (2004). On the computational complexity of 2-interval pattern matching problems. Theoretical Computer Science, 312(2-3), 223-249.
    • (2004) Theoretical Computer Science , vol.312 , pp. 223-249
    • Vialette, S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.