-
1
-
-
0018624914
-
The -C-C-A end of tRNA and its role in protein biosynthesis
-
Sprinzl M., and Cramer F. The -C-C-A end of tRNA and its role in protein biosynthesis. Prog. Nucleic Acid Res. Mol. Biol. 22 (1979) 1-69
-
(1979)
Prog. Nucleic Acid Res. Mol. Biol.
, vol.22
, pp. 1-69
-
-
Sprinzl, M.1
Cramer, F.2
-
2
-
-
0034832844
-
This is the end: processing, editing and repair at the tRNA 3′-terminus
-
Schürer H., Schiffer S., Marchfelder A., and Mörl M. This is the end: processing, editing and repair at the tRNA 3′-terminus. Biol. Chem. 382 (2001) 1147-1156
-
(2001)
Biol. Chem.
, vol.382
, pp. 1147-1156
-
-
Schürer, H.1
Schiffer, S.2
Marchfelder, A.3
Mörl, M.4
-
3
-
-
6944236106
-
tRNA maturation: RNA polymerization without a nucleic acid template
-
Weiner A.M. tRNA maturation: RNA polymerization without a nucleic acid template. Curr. Biol. 14 (2004) R883-R885
-
(2004)
Curr. Biol.
, vol.14
-
-
Weiner, A.M.1
-
4
-
-
32344447144
-
A story with a good ending: tRNA 3′-end maturation by CCA-adding enzymes
-
Xiong Y., and Steitz T.A. A story with a good ending: tRNA 3′-end maturation by CCA-adding enzymes. Curr. Opin. Struct. Biol. 16 (2006) 12-17
-
(2006)
Curr. Opin. Struct. Biol.
, vol.16
, pp. 12-17
-
-
Xiong, Y.1
Steitz, T.A.2
-
5
-
-
0029903451
-
CCA-adding enzymes and poly(A) polymerases are all members of the same nucleotidyltransferase superfamily: characterization of the CCA-adding enzyme from the archaeal hyperthermophile
-
Yue D., Maizels N., and Weiner A.M. CCA-adding enzymes and poly(A) polymerases are all members of the same nucleotidyltransferase superfamily: characterization of the CCA-adding enzyme from the archaeal hyperthermophile. Sulfolobus shibatae, RNA 2 (1996) 895-908
-
(1996)
Sulfolobus shibatae, RNA
, vol.2
, pp. 895-908
-
-
Yue, D.1
Maizels, N.2
Weiner, A.M.3
-
6
-
-
0023394389
-
tRNA nucleotidyltransferase is not essential for Escherichia coli viability
-
Zhu L., and Deutscher M.P. tRNA nucleotidyltransferase is not essential for Escherichia coli viability. EMBO J. 6 (1987) 2473-2477
-
(1987)
EMBO J.
, vol.6
, pp. 2473-2477
-
-
Zhu, L.1
Deutscher, M.P.2
-
7
-
-
0035160133
-
A eubacterial origin for the human tRNA nucleotidyltransferase?
-
Reichert A.S., Thurlow D.L., and Mörl M. A eubacterial origin for the human tRNA nucleotidyltransferase?. Biol. Chem. 382 (2001) 1431-1438
-
(2001)
Biol. Chem.
, vol.382
, pp. 1431-1438
-
-
Reichert, A.S.1
Thurlow, D.L.2
Mörl, M.3
-
8
-
-
0033735040
-
-
Helm M., Brulé H., Friede D., Giegé R., Pütz J., and Florentz C. Search for characteristic structural features of mammalian mitochondrial tRNAs, RNA 6 (2000) 1356-1379
-
(2000)
Search for characteristic structural features of mammalian mitochondrial tRNAs, RNA
, vol.6
, pp. 1356-1379
-
-
Helm, M.1
Brulé, H.2
Friede, D.3
Giegé, R.4
Pütz, J.5
Florentz, C.6
-
9
-
-
0035955658
-
Identification and characterization of mammalian mitochondrial tRNA nucleotidyltransferases
-
Nagaike T., Suzuki T., Tomari Y., Takemoto-Hori C., Negayama F., Watanabe K., and Ueda T. Identification and characterization of mammalian mitochondrial tRNA nucleotidyltransferases. J. Biol. Chem. 276 (2001) 40041-40049
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 40041-40049
-
-
Nagaike, T.1
Suzuki, T.2
Tomari, Y.3
Takemoto-Hori, C.4
Negayama, F.5
Watanabe, K.6
Ueda, T.7
-
10
-
-
4344646051
-
The HD domain of the Escherichia coli tRNA nucleotidyltransferase das 2′,3′-cyclic phosphodiesterase, 2′-nucleotidase, and phosphatase activities
-
Yakunin A.F., Proudfoot M., Kuznetsova E., Savchenko A., Brown G., Arrowsmith C.H., and Edwards A.M. The HD domain of the Escherichia coli tRNA nucleotidyltransferase das 2′,3′-cyclic phosphodiesterase, 2′-nucleotidase, and phosphatase activities. J. Biol. Chem. 279 (2004) 36819-36827
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 36819-36827
-
-
Yakunin, A.F.1
Proudfoot, M.2
Kuznetsova, E.3
Savchenko, A.4
Brown, G.5
Arrowsmith, C.H.6
Edwards, A.M.7
-
11
-
-
33846573777
-
A splice variant of the human CCA-adding enzyme with modified activity
-
Lizano E., Schuster J., Müller M., Kelso J., and Mörl M. A splice variant of the human CCA-adding enzyme with modified activity. J. Mol. Biol. 366 (2007) 1258-1265
-
(2007)
J. Mol. Biol.
, vol.366
, pp. 1258-1265
-
-
Lizano, E.1
Schuster, J.2
Müller, M.3
Kelso, J.4
Mörl, M.5
-
12
-
-
0023019586
-
High-level overexpression, rapid purification, and properties of Escherichia coli tRNA nucleotidyltransferase
-
Cudny H., and Deutscher M.P. High-level overexpression, rapid purification, and properties of Escherichia coli tRNA nucleotidyltransferase. J. Biol. Chem. 261 (1986) 6450-6453
-
(1986)
J. Biol. Chem.
, vol.261
, pp. 6450-6453
-
-
Cudny, H.1
Deutscher, M.P.2
-
13
-
-
4143073655
-
Exchange of regions between bacterial poly(A) polymerase and CCA adding enzyme generates altered specificities
-
Betat H., Rammelt C., Martin G., and Mörl M. Exchange of regions between bacterial poly(A) polymerase and CCA adding enzyme generates altered specificities. Mol. Cell 15 (2004) 389-398
-
(2004)
Mol. Cell
, vol.15
, pp. 389-398
-
-
Betat, H.1
Rammelt, C.2
Martin, G.3
Mörl, M.4
-
14
-
-
0028113460
-
In vitro and in vivo comparison of hammerhead, hairpin, and hepatitis delta virus self-processing ribozyme cassettes
-
Chowrira B.M., Pavco P.A., and McSwiggen J.A. In vitro and in vivo comparison of hammerhead, hairpin, and hepatitis delta virus self-processing ribozyme cassettes. J. Biol. Chem. 269 (1994) 25856-25864
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 25856-25864
-
-
Chowrira, B.M.1
Pavco, P.A.2
McSwiggen, J.A.3
-
15
-
-
0028332817
-
Cis- and trans-acting ribozymes from a human pathogen, hepatitis delta virus
-
Been M.D. Cis- and trans-acting ribozymes from a human pathogen, hepatitis delta virus. Trends Biochem. Sci. 19 (1994) 251-256
-
(1994)
Trends Biochem. Sci.
, vol.19
, pp. 251-256
-
-
Been, M.D.1
-
16
-
-
33947356675
-
Mechanistic characterization of the HDV genomic ribozyme: a mutant of the C41 motif provides insight into the positioning and thermodynamic linkage of metal ions and protons
-
Nakano S., and Bevilacqua P.C. Mechanistic characterization of the HDV genomic ribozyme: a mutant of the C41 motif provides insight into the positioning and thermodynamic linkage of metal ions and protons. Biochemistry 46 (2007) 3001-3012
-
(2007)
Biochemistry
, vol.46
, pp. 3001-3012
-
-
Nakano, S.1
Bevilacqua, P.C.2
-
17
-
-
84889268370
-
Production of RNAs with homogeneous 5′ and 3′ ends
-
Hartmann R.K., Bindereif A., Schön A., and Westhof E. (Eds), Wiley-VCH, Weinheim
-
Mörl M., Lizano E., Willkomm D.K., and Hartmann R.K. Production of RNAs with homogeneous 5′ and 3′ ends. In: Hartmann R.K., Bindereif A., Schön A., and Westhof E. (Eds). Handbook of RNA Biochemistry (2005), Wiley-VCH, Weinheim 22-35
-
(2005)
Handbook of RNA Biochemistry
, pp. 22-35
-
-
Mörl, M.1
Lizano, E.2
Willkomm, D.K.3
Hartmann, R.K.4
-
18
-
-
1542365201
-
A universal method to produce in vitro transcripts with homogeneous 3′ ends
-
Schürer H., Lang K., Schuster J., and Mörl M. A universal method to produce in vitro transcripts with homogeneous 3′ ends. Nucleic Acids Res. 30 (2002) e56
-
(2002)
Nucleic Acids Res.
, vol.30
-
-
Schürer, H.1
Lang, K.2
Schuster, J.3
Mörl, M.4
-
20
-
-
3943067796
-
Structural basis for template-independent RNA polymerization
-
Tomita K., Fukai S., Ishitani R., Ueda T., Takeuchi N., Vassylyev D.G., and Nureki O. Structural basis for template-independent RNA polymerization. Nature 430 (2004) 700-704
-
(2004)
Nature
, vol.430
, pp. 700-704
-
-
Tomita, K.1
Fukai, S.2
Ishitani, R.3
Ueda, T.4
Takeuchi, N.5
Vassylyev, D.G.6
Nureki, O.7
-
21
-
-
0030063762
-
Effects of nucleotide substitutions within the T-loop of precursor tRNAs on interaction with ATP/CTP:tRNA nucleotidyltransferases from Escherichia coli and yeast
-
Li Z., Gillis K.A., Hegg L.S., Zhang J., and Thurlow D.L. Effects of nucleotide substitutions within the T-loop of precursor tRNAs on interaction with ATP/CTP:tRNA nucleotidyltransferases from Escherichia coli and yeast. Biochem. J. 314 (1996) 49-53
-
(1996)
Biochem. J.
, vol.314
, pp. 49-53
-
-
Li, Z.1
Gillis, K.A.2
Hegg, L.S.3
Zhang, J.4
Thurlow, D.L.5
-
22
-
-
0030700270
-
RNA minihelices as model substrates for ATP/CTP:tRNA nucleotidyltransferase
-
Li Z., Sun Y., and Thurlow D.L. RNA minihelices as model substrates for ATP/CTP:tRNA nucleotidyltransferase. Biochem. J. 327 (1997) 847-851
-
(1997)
Biochem. J.
, vol.327
, pp. 847-851
-
-
Li, Z.1
Sun, Y.2
Thurlow, D.L.3
-
23
-
-
0031883924
-
A top-half tDNA minihelix is a good substrate for the eubacterial CCA- adding enzyme
-
Shi P.Y., Weiner A.M., and Maizels N. A top-half tDNA minihelix is a good substrate for the eubacterial CCA- adding enzyme. RNA 4 (1998) 276-284
-
(1998)
RNA
, vol.4
, pp. 276-284
-
-
Shi, P.Y.1
Weiner, A.M.2
Maizels, N.3
-
24
-
-
0017368402
-
The dinucleoside monophosphate, CpC, is a model acceptor substrate for rabbit-liver tRNA nucleotidyltransferase
-
Masiakowski P., and Deutscher M.P. The dinucleoside monophosphate, CpC, is a model acceptor substrate for rabbit-liver tRNA nucleotidyltransferase. FEBS Lett. 77 (1977) 261-264
-
(1977)
FEBS Lett.
, vol.77
, pp. 261-264
-
-
Masiakowski, P.1
Deutscher, M.P.2
-
25
-
-
0037074014
-
Crystal structures of the Bacillus stearothermophilus CCA-adding enzyme and its complexes with ATP or CTP
-
Li F., Xiong Y., Wang J., Cho H.D., Tomita K., Weiner A.M., and Steitz T.A. Crystal structures of the Bacillus stearothermophilus CCA-adding enzyme and its complexes with ATP or CTP. Cell 111 (2002) 815-824
-
(2002)
Cell
, vol.111
, pp. 815-824
-
-
Li, F.1
Xiong, Y.2
Wang, J.3
Cho, H.D.4
Tomita, K.5
Weiner, A.M.6
Steitz, T.A.7
-
26
-
-
33846062140
-
Reengineering CCA-adding enzymes to function as (U,G)- or dCdCdA-adding enzymes or poly(C,A) and poly(U,G) polymerases
-
Cho H.D., Verlinde C.L., and Weiner A.M. Reengineering CCA-adding enzymes to function as (U,G)- or dCdCdA-adding enzymes or poly(C,A) and poly(U,G) polymerases. Proc. Natl. Acad. Sci. USA 104 (2007) 54-59
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 54-59
-
-
Cho, H.D.1
Verlinde, C.L.2
Weiner, A.M.3
-
27
-
-
0022366980
-
RNase T is responsible for the end-turnover of tRNA in Escherichia coli
-
Deutscher M.P., Marlor C.W., and Zaniewski R. RNase T is responsible for the end-turnover of tRNA in Escherichia coli. Proc. Natl. Acad. Sci. USA 82 (1985) 6427-6430
-
(1985)
Proc. Natl. Acad. Sci. USA
, vol.82
, pp. 6427-6430
-
-
Deutscher, M.P.1
Marlor, C.W.2
Zaniewski, R.3
-
28
-
-
0026012161
-
RNase T affects Escherichia coli growth and recovery from metabolic stress
-
Padmanabha K.P., and Deutscher M.P. RNase T affects Escherichia coli growth and recovery from metabolic stress. J. Bacteriol. 173 (1991) 1376-1381
-
(1991)
J. Bacteriol.
, vol.173
, pp. 1376-1381
-
-
Padmanabha, K.P.1
Deutscher, M.P.2
-
29
-
-
0037119408
-
The physiological role of RNase T can be explained by its unusual substrate specificity
-
Zuo Y., and Deutscher M.P. The physiological role of RNase T can be explained by its unusual substrate specificity. J. Biol. Chem. 277 (2002) 29654-29661
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 29654-29661
-
-
Zuo, Y.1
Deutscher, M.P.2
-
30
-
-
0034669531
-
Addition of non-genomically encoded nucleotides to the 3′-terminus of maize mitochondrial mRNAs: truncated rps12 mRNAs frequently terminate with CCA
-
Williams M.A., Johzuka Y., and Mulligan R.M. Addition of non-genomically encoded nucleotides to the 3′-terminus of maize mitochondrial mRNAs: truncated rps12 mRNAs frequently terminate with CCA. Nucleic Acids Res. 28 (2000) 4444-4451
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 4444-4451
-
-
Williams, M.A.1
Johzuka, Y.2
Mulligan, R.M.3
-
31
-
-
0025109847
-
Recognition of the tRNA-like structure in tobacco mosaic viral RNA by ATP/CTP:tRNA nucleotidyltransferases from Escherichia coli and Saccharomyces cerevisiae
-
Hegg L.A., Kou M., and Thurlow D.L. Recognition of the tRNA-like structure in tobacco mosaic viral RNA by ATP/CTP:tRNA nucleotidyltransferases from Escherichia coli and Saccharomyces cerevisiae. J. Biol. Chem. 265 (1990) 17441-17445
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 17441-17445
-
-
Hegg, L.A.1
Kou, M.2
Thurlow, D.L.3
-
32
-
-
0036479118
-
U2 small nuclear RNA is a substrate for the CCA-adding enzyme (tRNA nucleotidyltransferase)
-
Cho H.D., Tomita K., Suzuki T., and Weiner A.M. U2 small nuclear RNA is a substrate for the CCA-adding enzyme (tRNA nucleotidyltransferase). J. Biol. Chem. 277 (2002) 3447-3455
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 3447-3455
-
-
Cho, H.D.1
Tomita, K.2
Suzuki, T.3
Weiner, A.M.4
-
33
-
-
0033575087
-
Kinetics of RNA degradation by specific base catalysis of transesterification involving the 2′ hydroxyl group
-
Li Y., and Breaker R.R. Kinetics of RNA degradation by specific base catalysis of transesterification involving the 2′ hydroxyl group. J. Am. Chem. Soc. 121 (1999) 5364-5372
-
(1999)
J. Am. Chem. Soc.
, vol.121
, pp. 5364-5372
-
-
Li, Y.1
Breaker, R.R.2
-
34
-
-
0032831634
-
Relationship between internucleotide linkage geometry and the stability of RNA
-
Soukup G.A., and Breaker R.R. Relationship between internucleotide linkage geometry and the stability of RNA. RNA 5 (1999) 1308-1325
-
(1999)
RNA
, vol.5
, pp. 1308-1325
-
-
Soukup, G.A.1
Breaker, R.R.2
-
35
-
-
0028364742
-
Energetics of catalysis by ribonucleases: fate of the 2′,3′-cyclic phosphodiester intermediate
-
Thompson J.E., Venegas F.D., and Raines R.T. Energetics of catalysis by ribonucleases: fate of the 2′,3′-cyclic phosphodiester intermediate. Biochemistry 33 (1994) 7408-7414
-
(1994)
Biochemistry
, vol.33
, pp. 7408-7414
-
-
Thompson, J.E.1
Venegas, F.D.2
Raines, R.T.3
-
36
-
-
0032408864
-
The HD domain defines a new superfamily of metal-dependent phosphohydrolases
-
Aravind L., and Koonin E.V. The HD domain defines a new superfamily of metal-dependent phosphohydrolases. Trends Biochem. Sci. 23 (1998) 469-472
-
(1998)
Trends Biochem. Sci.
, vol.23
, pp. 469-472
-
-
Aravind, L.1
Koonin, E.V.2
-
37
-
-
0242389785
-
Divergent evolutions of trinucleotide polymerization revealed by an archaeal CCA-adding enzyme structure
-
Okabe M., Tomita K., Ishitani R., Ishii R., Takeuchi N., Arisaka F., Nureki O., and Yokoyama S. Divergent evolutions of trinucleotide polymerization revealed by an archaeal CCA-adding enzyme structure. EMBO J. 22 (2003) 5918-5927
-
(2003)
EMBO J.
, vol.22
, pp. 5918-5927
-
-
Okabe, M.1
Tomita, K.2
Ishitani, R.3
Ishii, R.4
Takeuchi, N.5
Arisaka, F.6
Nureki, O.7
Yokoyama, S.8
-
38
-
-
0345171487
-
Crystal structures of an archaeal class I CCA-adding enzyme and its nucleotide complexes
-
Xiong Y., Li F., Wang J., Weiner A.M., and Steitz T.A. Crystal structures of an archaeal class I CCA-adding enzyme and its nucleotide complexes. Mol. Cell. Biochem. 12 (2003) 1165-1172
-
(2003)
Mol. Cell. Biochem.
, vol.12
, pp. 1165-1172
-
-
Xiong, Y.1
Li, F.2
Wang, J.3
Weiner, A.M.4
Steitz, T.A.5
-
39
-
-
3943089138
-
Mechanism of transfer RNA maturation by CCA-adding enzyme without using an oligonucleotide template
-
Xiong Y., and Steitz T.A. Mechanism of transfer RNA maturation by CCA-adding enzyme without using an oligonucleotide template. Nature 430 (2004) 640-645
-
(2004)
Nature
, vol.430
, pp. 640-645
-
-
Xiong, Y.1
Steitz, T.A.2
-
40
-
-
33750430666
-
Complete crystallographic analysis of the dynamics of CCA sequence addition
-
Tomita K., Ishitani R., Fukai S., and Nureki O. Complete crystallographic analysis of the dynamics of CCA sequence addition. Nature 443 (2006) 956-960
-
(2006)
Nature
, vol.443
, pp. 956-960
-
-
Tomita, K.1
Ishitani, R.2
Fukai, S.3
Nureki, O.4
-
41
-
-
0032101196
-
CCA addition by tRNA nucleotidyltransferase: polymerization without translocation?
-
Shi P.Y., Maizels N., and Weiner A.M. CCA addition by tRNA nucleotidyltransferase: polymerization without translocation?. EMBO J. 17 (1998) 3197-3206
-
(1998)
EMBO J.
, vol.17
, pp. 3197-3206
-
-
Shi, P.Y.1
Maizels, N.2
Weiner, A.M.3
-
42
-
-
0032491395
-
The CCA-adding enzyme has a single active site
-
Yue D., Weiner A.M., and Maizels N. The CCA-adding enzyme has a single active site. J. Biol. Chem. 273 (1998) 29693-29700
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 29693-29700
-
-
Yue, D.1
Weiner, A.M.2
Maizels, N.3
-
43
-
-
0033119535
-
DNA polymerase beta-like nucleotidyltransferase superfamily: identification of three new families, classification and evolutionary history
-
Aravind L., and Koonin E.V. DNA polymerase beta-like nucleotidyltransferase superfamily: identification of three new families, classification and evolutionary history. Nucleic Acids Res. 27 (1999) 1609-1618
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 1609-1618
-
-
Aravind, L.1
Koonin, E.V.2
|