Morphology, taxonomy, and phylogenetic analysis of a new species of Pythium isolated from France

Fungal Diversity

Volumn 28, Issue , 2008, Pages 55-63

  Paul, B ^a   Mathew, R ^a   Kanak, B ^a   Paul, A ^b   Henry, M ^b   Lefort, F ^c   Belbahri, L ^c  

^a UNIVERSITÉ DE BOURGOGNE   (France)

^b Sugarcane Research Station   (India)

^c Ecole d'Ingenieurs de Lullier   (Switzerland)

Author keywords

Antheridia; Biological control; Botrytis cinerea; ITS region; Oogonia; Pythium viniferum; rRNA

Indexed keywords

BOTRYOTINIA FUCKELIANA; BOTRYTIS; FUNGI; PYTHIUM; PYTHIUM DEBARYANUM; PYTHIUM VINIFERUM; PYTHIUM VIOLAE; VITIS;

EID: 42449147630     PISSN: 15602745     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (29)

1. Abdelghani, E.Y., Bala, K., and Paul, B. (2004). Characterization of Pythium paroecandrum and its antagonism towards Botrytis cinerea, the causative agent of grey mould disease of grape. FEMS Microbiology Letters 230: 177-183.
2. Belbahri, L., Calmin, G., Sanchez-Hernandez, E., Oszako, T. and Lefort, F. (2006a). Pythium sterilum sp. nov. isolated from Poland, Spain and France: its morphology and molecular phylogenetic position. FEMS Microbiology Letters 255: 209-214.
3. Belbahri, L., Moralejo, E., Calmin, G., Oszako, T., Garcia, J.A., Descals, E. and Lefort, F. (2006b) Phytophthora polonica, a new species isolated from declining Alnus glutinosa stands in Poland. FEMS Microbiology Letters 261: 165-174.
4. Chet, I. (1987). Trichoderma - application, mode of action, and potential as a biocontrol of soil-borne plant pathogenic fungi. In: Innovative Approaches to Plant Disease Control (ed. I. Chet), Wiley, New York: 137-160.
5. De Cock, A.W.A.M., Mendoza, L., Padhye, A.A., Ajello, L. and Kaufman, L. (1987). Pythium insidiosum sp. nov., the etiologic agent of pythiosis. Journal of Clinical Microbiology 25: 344-349.
6. Dennis, C. and Webster, J. (1971). Antagonistic properties of species-groups of Trichoderma. I. Production of non-volatile antibiotics. Transactions of the British Mycological Society 57: 363-369.
7. Dick, M.W. (2001). The Peronosporomycetes. In: The Mycota VII Part A, Systematics and Evolution (eds. D.J. McLaughlin, E.G. McLaughlin, and P.A. Lemke), Springer Verlag, Berlin: 39-72.
8. Erwin, D.C. and Ribeiro, O.K. (1996). Phytophthora Diseases Worldwide. The American Phytopathological Society, St. Paul, MN.
9. Galtier, N., Gouy, M. and Gautier, C. (1996). SEAVIEW and PHYLO_WIN, two graphic tools for sequence alignment and molecular phylogeny. Computer Applications in Bioscience 12: 543-548.
10. Guindon, S. and Gascuel, O. (2003). A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Systematic Biology 52: 696-704.
11. Hasegawa, M., Kishino, H. and Yano, T.A. (1985). Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. Journal of Molecular Evolution 22: 160-174.
12. Hendrix, F.F. and Campbell, W. (1973). Pythiums as plant pathogens. Annual Review of Phytopathology 11: 78-98.
13. Huelsenbeck, J.P. and Ronquist, F. (2001). MRBAYES: Bayesian inference of phylogeny. Bioinformatics 17: 754-755.
14. Jones, E.E. and Deacon, J.W. (1995). Comparative physiology and behaviour of the mycoparasites Pythium acanthophoron, P. oligandrum and P. mycoparasiticum. Biocontrol Science Technology 5: 27-39.
15. Kim, K.K., Fravel, D.R. and Papvizas, G.C. (1990). Glucose oxidase as the antifungal principle of talaron from Talaromyces flavus. Canadian Journal of Microbiology 36: 760-764.
16. Lanave, C., Preparata, G., Saccone, C. and Serio, G. (1984). A new method for calculating evolutionary substitution rates. Journal of Molecular Evolution 20: 86-93.
17. Lévesque, C.A. and De Cock, A.W.A.M. (2004). Molecular phylogeny and taxonomy of the genus Pythium. Mycological Research 108: 1363-1383.
18. Matsumoto, C., Kageyama, K., Suga, H. and Hyakumachi, M. (1999). Phylogenetic relationships of Pythium species based on ITS and 5.8S sequences of the ribosomal DNA. Mycoscience 40: 321-331.
19. Middleton, J.T. (1943). The taxonomy, host range and geographic distribution of the genus Pythium. Memoirs of the Torrey Botanical Club 20: 1-171.
20. Paul, B., Bala, K., Lassaad, B., Calmin, G., Sanchez-Hernandez, E. and Lefort, F. (2006). A new species of Pythium with ornamented oogonia: morphology, taxonomy, internal transcribed spacer region of its ribosomal RNA, and its comparison with related species. FEMS Microbiology Letters 254: 317-323.
21. Paul, B., Galland, D. and Masih, I. (1999). Pythium prolatum isolated from soil in the burgundy region: A new record for Europe. FEMS Microbiology Letters 173: 69-75.
22. Paul, B. (1999). Pythium periplocum, an aggressive mycoparasite of Botrytis cinerea causing the grey mould disease of grape-vine. FEMS Microbiology Letters 227: 277-280.
23. Paul, B. (2000). Pythium contiguanum nomen novum (syn. Pythium dreschleri Paul), its antagonism to Botrytis cinerea, ITS1 region of its nuclear ribosomal DNA, and its comparison with related species. FEMS Microbiology Letters 183: 105-110.
24. Paul, B. (2004). A new species isolated from burgundian vineyards and its antagonism towards Botrytis cinerea, the causative agent of the grey mould disease. FEMS Microbiology Letters 234: 269-274.
25. Plaats-Niterink, A.J. van der (1981). Monograph of the genus Pythium. Studies in Mycology 21: 1-242.
26. Rodriguez, F., Oliver, J.F., Martin, A. and Medina, J.R. (1990). The general stochastic model of nucleotide substitution. Journal of Theoretical Biology 142: 485-501.
27. Saunders, G.A., Washburn, J.O., Egerter, D.E. and Anderson, J.A. (1988). Pathogenicity of fungi isolated from field collected larvae of the western tree hole mosquito, Aedes sierrensis (Diptera: Culicidae). Journal of Invertebrate Pathology 52: 360-363.
28. Waterhouse, G.M. (1967). Key to Pythium Pringsheim. Mycological papers 109: 1-15.
29. White, T.J., Burns, T., Lee, S. and Taylor J. (1990). Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: PCR protocols: a guide to methods and applications (eds. M.A. Innis, D.H. Gelfand, J.J. Sinsky and T. J. White) Academic Press, San Diego: 315-322.