Detection of avian influenza virus of H9 subtype in the faeces of experimentally and naturally infected chickens by reverse transcription- polymerase chain reaction

Acta Veterinaria Brno

Volumn 76, Issue 3, 2007, Pages 405-413

  Noroozian, H ^a   Vasfi Marandi, M ^a   Razazian, M ^b  

^a UNIVERSITY OF TEHRAN   (Iran)

^b Division of Poultry Dis ^*

Author keywords

AI; Cloacal swabs; H9; RT PCR

Indexed keywords

AVES; AVIAN INFLUENZA VIRUS; GALLUS GALLUS; ORTHOMYXOVIRIDAE;

EID: 42449115761     PISSN: 00017213     EISSN: None     Source Type: Journal    
DOI: 10.2754/avb200776030405     Document Type: Article

References (43)

1. ALDOUS EW, ALEXANDER DJ 2001: Detection and differentiation of Newcastle disease virus (avian paramyxovirus type 1). Avian Pathol 30: 117-128
2. ALLWINN R, PREISER W, RABENAU H, BURBAUM S, STURMER M, DOERR HW 2002: Laboratory diagnosis of influenza - virology or serology? Med Microbiol Immunol 191: 157-160
3. ATMAR RL, BAXTER BD, DOMINGUEZ EA, TABER LH 1996: Comparison of reverse transcription-PCR with tissue culture and other rapid diagnostic assays for detection of type A Influenza virus. J Clin Microbiol 34: 2604-2606
4. BOIVIN G, LARDY L, KRESS A 2001: Evaluation of a rapid optical immunoassay for influenza viruses (FLU OIA test) in comparison with cell culture and reverse transcription-PCR. J Clin Microbiol 39: 730-732
5. BOOTH S, BALERIOLA C, RAWLINSON WD 2006: Comparison of two rapid influenza A/B test kits with reference methods showing high specificity and sensitivity for influenza A infection. J Med Virol 78: 619-622
6. CATTOLI G, DRAGO A, MANIERO S, TOFFAN A, BERTOLI E, FASSINA S, TERREGINO C, ROBBI C, VICENZONI G, CAPPUA I 2004: Comparison of three rapid detection systems for type A Influenza virus on tracheal swabs of experimentally and naturally infected birds. Avian Pathol 33: 432-437
7. CLAAS ECJ, VAN MILAAN AJ, SPRENGER MJW, RUITEN-STUIVER M, ARRON GI, ROTHBRATH PH, MASUREL N 1993: Prospective application of reverse transcriptase polymerase chain reaction for diagnosis influenza reactions in respiratory samples from children's hospital. J Clin Microbiol 162: 2218-2221
8. DAVISON S, ZIEGLER AF, ECKROADE RJ 1998: Comparison of an antigen-capture enzyme immunoassay with virus isolation for avian Influenza from field samples. Avian Dis 47: 791-795
9. DOMINGUEZ EA, TABER LH, COUCH RB 1993: Comparison of rapid diagnostic techniques for respiratory syncytial and influenza A virus respiratory infections in young children. J Clin Microbiol 31: 2286-2290
10. FEDORKO DP, NELSON NA, MCAULIFFE JM, SUBBARAO K 2006: Performance of rapid tests for detection of avian influenza A virus type H5N1 and H9N2. J Clin Microbiol 44: 1596-1597
11. FOUCHIER RAM, BESTEBROER TM, HERFST S, KEMP LVD, RIMMELZWAAN GF, OSTERHAUS ADME 2000: Detection of influenza A viruses from different species by PCR amplification of conserved sequences in the matrix gene. J Clin Microbiol 38: 4096-4101
12. GAVIN PJ, THOMSON RB 2003: Review of rapid Diagnostic tests for Influenza. Clin Appl Immunol Rev 4: 151-172
13. GOHM DS, THUR B, HOFMANN MA 2000: Detection of Newcastle disease virus in organs and feces of experimentally infected chickens using RT-PCR. Avian Pathol 29: 143-152
14. HANDBERG KJ, NIELSEN OL, PEDERSEN MW, JORGENSON PH 1999: Detection and strain differentiation of infectious bronchitis virus in tracheal tissues from experimentally infected chickens by reverse transcription-polymerase chain reaction. Comparison with an immunohistochemical technique. Avian Pathol 28: 327-335
15. HERMANN B, LARSSON C, ZWEYGBERG BW 2001: Simultaneous detection and typing of Influenza A and B by a nested reverse transcription-PCR: comparison to virus isolation and antigen detection by immunofluorescence and optical immunoassay (FLU OIA). J Clin Microbiol 39: 134-138
16. HIRST G, PONS M 1973: Mechanism of influenza recombination. II. Virus aggregation and its effects on plaque formation by so-called non-infective virus. Virology 56: 620-631
17. HORIMOTO T, KAWAOKA Y 1995: Direct reverse transcription PCR to determine virulence potential of influenza A viruses in birds. J Clin Microbiol 33: 748-751
18. KOCH G 2003: Laboratory issues: Assessment of the sensitivity and specificity of PCR for NDV of cloacal and tracheal swabs compared to virus isolation. Proceedings of the joint seventh annual meetings of the national Newcastle disease and avian influenza laboratories of countries of the European union, Padova, Italy, 2002, pp.114-117
19. LIU J, OKAZAKI K, SHI W, WU Q, MWEEN AS, KIDA H 2003: Phylogenetic analysis of neuraminidase gene of H9N2 Influenza viruses prevalent in chickens in China during 1995-2002. Virus Genes 27:197-202
20. MAGNARD C, VALETTE M, AYMARD M, LINA B 1999: Comparison of two nested PCR, cell culture and antigen detection for the diagnosis of upper respiratory tract infections due to Influenza viruses. J Med Virol 59: 215-220
21. MUNCH M, NIELSEN LP, HANDBERG KJ, JORGENSEN PH 2001: Detection and subtyping (H5 and H7) of avian type A Influenza virus by reverse transcription-PCR and PCR-ELISA. Arch Virol 146: 87-97
22. MURPHY FA, GIBBS EPJ, HORZINEK MC, STUDDERT MJ 1999: Veterinary Virology (3rd ed.). California, Academic Press, USA, pp. 466-468
23. NAKAMURA S, KATAMINE S, YAMAMOTO T, FONG S, KURATA T, HIRABAYASHI Y, SHIMADA K, HINO S, MIYAMOTO T 1993: Amplification and detection of a single molecule of human immunodeficiency virus RNA. Virus Genes 4: 325-338
24. NILI H, ASASI K 2003: Avian influenza (H9N2) outbreak in Iran. Avian Dis 47: 828-31
25. OIE Standard Commission 2004: Manual of diagnostic tests and vaccines for terrestrial animals (5th ed.), OIE Publication, Chapter 2.1.14.
26. OXBURGH L, HAGSTROM A 1999: A PCR based method for the identification of equine influenza virus from clinical samples. Vet Microbiol 67: 161-174
27. PEIRIS M, YAM WC, CHAN KH, GHOSE P, SHORTRIDGE KF 1999: Influenza A H9N2: aspects of laboratory diagnosis. J Clin Microbiol 37: 3426-3427
28. RYAN-POIRIER K, KATZ JM, WEBSTER RG, KAWAOKA Y 1992: Application of Directigen FLU-A for the detection of Influenza A virus in human and nonhuman specimens. J Clin Microbiol 30: 1072-1075
29. SCHORR E, WENTWORTH D, HINSHAW VS 1994: Use of polymerase chain reaction to detect swine influenza virus in nasal swab specimens. Am J Vet Res 55: 952-956
30. SENNE DA 1998: Virus propagation in embryonating eggs. In: SWAYNE DE, GLISSON JR, JACKWOOD MW, PEARSON JE, REED WM (Eds): Isolation and Identification of Avian Pathogens (4th ed.). American Association of Avian Pathologists, University of Pennsylvania, USA, pp. 235-240
31. SPACKMAN E, SENNE DA, MYERS TJ, BULAGA LL, GARBER LP, PERDUE ML, LOHMAN K, DAUM LT, SUAREZ DL 2002: Development of a real time reverse transcription PCR assay for type A Influenza virus and the avian H5 and H7 haemaggluttinin subtypes. J Clin Microbiol 40: 3256-3260
32. STARICK E, ROMER-OBERDORFER A, WERNER O 2000: Type- and subtype- specific RT-PCR assays for avian influenza viruses (AIV). J Vet Med B-Infect Dis Vet P 47: 295-301
33. STEININGER C, KUNDI M, ABERLE SW, ABERLE JH, POPW-KRAUPP T 2002: Effectiveness of reverse transcription-PCR, virus isolation and enzyme-linked immunosorbent assay for diagnosis of Influenza A virus infection in different age groups. J Clin Microbiol 40: 2051-2056
34. th ed.). American Association of Avian Pathologists, Iowa State University Press, Iowa, USA, pp.135-160
35. TAUBENBERGER JK, LAYNE SP 2001: Diagnosis of Influenza Virus: coming to grips with the molecular era. Mol Diagn 6: 201-205
36. st meeting of the World Veterinary Association. Lyon, France
37. VASFI MARANDI M, BOZORGMEHRI FARD MH 2001: Preparation and evaluation of an inactivated H9N2 avian influenza antigen for using in haemagglutination inhibition test. Iranian J Vet Res 2: 174-181
38. th ed.). American Association of Avian Pathologists, University of Pennsylvania, USA, pp. 235-240
39. WALLACE LA, MCAULAY KA, DOUGLAS JD, ELDER AG, STOTT DJ, CARMAN WF 1999: Influenza diagnosis: form dark isolation into the molecular light, West of Scotland Respiratory Virus Study Group. J Infect 39: 221-226
40. WANER JL, TODD SJ, SHALABY H, MURPHY P, WALL LV 1991: Comparison of Directigen FLU-A with viral rapid isolation and direct immunofluorescence for the rapid detection and identification of influenza A virus. J Clin Microbiol 29: 479-482
41. WILDE J, EIDEN J, YOLKEN R 1990: Removal of inhibitory substances from human fecal specimens for detection of group A rotaviruses by reverse transcriptase and PCR. J Clin Microbiol 28: 1300-1307
42. WOOLCOCK PR, CARDONA CJ 2005: Commercial immunoassay kits for the detection of influenza virus type A: evaluations of their use with poultry. Avian Dis 49: 477-481
43. YAMADA A, IMANISHI J., NAKAJIMA K, NAKAJIMA S 1991: Detection of influenza viruses in throat swab by using polymerase chain reaction. Microbiol Immunol 35: 259-265