Single nucleotide polymorphisms in the ovine casein genes detected by polymerase chain reaction-single strand conformation polymorphism

Journal of Dairy Science

Volumn 87, Issue 8, 2004, Pages 2606-2613

  Ceriotti, G ^a   Chessa, S ^a   Bolla, P ^a   Budelli, E ^b   Blanchi, L ^c   Duranti, E ^c   Caroli, A ^d  

^a UNIVERSITY OF MILAN   (Italy)

^b PARCO TECNOLOGICO PADANO   (Italy)

^c UNIVERSITY OF PERUGIA   (Italy)

^d UNIVERSITY OF BARI   (Italy)

Author keywords

Casein; Genetic polymorphism; Sheep; SSCP

Indexed keywords

ANIMALIA; MAMMALIA; OVIS; OVIS ARIES; SARDA;

EID: 4243172433     PISSN: 00220302     EISSN: None     Source Type: Journal    
DOI: 10.3168/jds.S0022-0302(04)73386-X     Document Type: Article

References (42)

1. Alais, C., and P. Jollès. 1966. Isolation, purification, and analysis of two κ-casein like fractions from sheep caseins. J. Dairy Sci. 50:1555-1561.
2. 3, B, and C. Anim. Genet. 30:322-323.
3. Bassam, B. J., G. Caetano-Anolles, and P. M. Gresshoff. 1991. Fast and sensitive silver staining of DNA in polyacrylamide gels. Anal. Biochem. 196:80-83.
4. Bastos, E., A. Cravador, J. Azevedo, and H. Guedes-Pinto. 2001. Single strand conformation polymorphism (SSCP) detection in six genes in Portuguese indigenous sheep breed "Churra da Terra Quente." Biotechnol. Agron. Soc. Environ. 5:7-15.
5. Bell, K., and H. A. McKenzie. 1967. The whey proteins of ovine milk. β-lactoglobulins A and B. Biochim. Biophys. Acta 147:123-134.
6. Boisnard, M., D. Hue, C. Bouniol, J. C. Mercier, and P. Gaye. 1991. Multiple mRNA species code for two non-allelic forms of ovine alpha s2-casein. Eur. J. Biochem. 201:633-641.
7. Caroli, A., O. Jann, E. Budelli, P. Bolla, S. Jäger, and G. Erhardt. 2001. Genetic polymorphism of goat κ-casein (CSN3) in different breeds and characterization at DNA level. Anim. Genet. 32:226-230.
8. Chessa, S., P. Bolla, C. Dario, E. Pieragostini, and A. Caroli. 2003a. Polimorfismi genetici lattoproteici nella razza ovina Gentile di Puglia: monitoraggio mediante focalizzazione isoelettrica. Sci. Tecn. Latt-Cas. 54:191-198.
9. Chessa, S., E. Budelli, K. Gutscher, A. Caroli, and G. Erhardt. 2003b. Simultaneous identification of five κ-casein (CSN3) alleles in domestic goat by polymerase chain reaction single strand conformation polymorphism. J. Dairy Sci. 86:3726-3729.
10. s1-casein variants in ovine milk. J. Dairy Res. 63:49-59.
11. Chiofalo, L., and P. Micari. 1987. Attuali conoscenze sulle varianti delle proteine del latte nelle popolazioni ovine allevate in Sicilia. Osservazioni sperimentali. Sci. Tecn. Latt-Cas. 38:104-114.
12. Dall'Olio, S., R. Davoli, and P. Bosi. 1989. Ricerche elettroforetiche delle proteine del latte nella razza ovina Sopravissana. Sci. Tecn. Latt.-Cas. 40:186-194.
13. Di Stasio, L., and P. Mariani. 2000. The role protein polymorphism in the genetic improvement of milk production. Zoot. Nutriz. Anim. 26:69-90.
14. Erhardt, G. 1989. Evidence for a third allele at the β-lactoglobulin (β-lg) locus of sheep milk and its occurrence in different breeds. Anim. Genet. 20:197-204.
15. Feligini, M., P. Parma, R. Aleandri, G. F. Greppi, and G. Enne. 1998. PCR-RFLP test for direct determination of beta-lactoglobulin genotype in sheep. Anim. Genet. 29:473-474.
16. Feligini, M., V. Cubric Curik, P. Parma, G. F. Greppi, and G. Enne. 2003. A single nucleotide polymorphism in the sheep κ-casein (CSN3) coding region. Page 100 in Proc. 54th EAAP Mtg., Rome, Italy.
17. s1-casein: localization of phosphorylation sites and characterization of genetic variants A, C and D. J. Dairy Res. 62:281-296.
18. Ferranti, P., R. Pizzan, G. Garro, S. Caira, L. Chianese, and F. Addeo. 2001. Mass spectrometry-based procedure for the identification of ovine casein heterogeneity. J. Dairy Res. 68:35-51.
19. Ferretti, L., P. Leone, and V. Sgaramella. 1990. Long range restriction analysis of the bovine casein genes. Nucleic Acids Res. 18:6829-6833.
20. s1 et β bovines. Eur. J. Biochem. 26:328-337.
21. s1 caprine, ses effets, son évolution. INRA Prod. Anim. 7:3-19.
22. Hall, T. A. 1999. BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl. Acids. Symp. Ser. 41:95-98.
23. Jann, O., G. Ceriotti, A. Caroli, and G. Erhardt. 2002a. A new variant in exon VII of bovine β-casein gene (CSN2) and its distribution among European breeds. J. Anim. Breed. Genet. 119:65-68.
24. Jann, O., E. M. Prinzenberg, H. Brandt, J. L. Williams, P. Ajmone-Marsan, P. Zaragoza, C. Özbeyaz, and G. Erhardt. 2002b. Intragenic haplotypes at the bovine CSN1S1 locus. Arch. Tierzucht. 45:13-22.
25. Jann, O., E. M. Prinzenberg, G. Luikart, A. Caroli, and G. Erhardt. 2004. High polymorphism in the κ-casein (CSN3) gene from wild and domestic caprine species revealed by DNA sequencing. J. Dairy Res. 71:188-195.
26. King, J. W. B. 1966. The caseins of sheep's milk. Pages 427-431 in Polimorphismes Biochimiques des Animaux. Inst. Nat. Recherche Agronomique, Paris, France.
27. Martin, P. 1993. Polymorphisme génétique des lactoprotéines caprines. Lait 73:511-532.
28. Mercier J. C., J. M. Chobert, and F. Addeo. 1976. Comparative analysis of the amino acid sequences of caseinomacropeptides from seven species. FEBS Lett. 72:208-214.
29. -s1 casein in sheep. Anim. Genet. 29:472-473.
30. Pirisi, A., G. Piredda, C. M. Papoff, R. Di Salvo, S. Pintus, G. Garro, P. Ferranti, and L. Chianese. 1999. Effects of sheep alpha s1-casein CC, CD and DD genotypes on milk composition and cheese-making properties. J. Dairy Res. 66:409-419.
31. Prinzenberg, E. M., I. Krause, and G. Erhardt. 1999. SSCP analysis at the bovine CSN3 locus discriminates six alleles corresponding to known protein variants (A, B, C, E, F, G) and three new DNA polymorphisms (H, I, A1). Anim. Biotechnol. 10:49-62.
32. Rampilli, M., F. Locci, M. G. Bardin, P. Bolla, and A. Caroli. 1992. Stabilità termica del siero di latte ovino: Effetto del genotipo β-lattoglobulinico Pages 167-174. in Proc. XXVII Simp. Int. Zoot., Milano, Italy. Arti Grafiche G.S.C., Sesto S. Giovanni (Mi), Italy.
33. Ramunno, L., G. Cosenza, A. Rando, N. P. P. Macciotta, M. Pappalardo, and P. Masina. 1997. Identification of carriers of the Welsh CASA1 variant using an allele-specific PCR method. Anim. Genet. 28:154-155.
34. Ramunno, L., P. Mariani, M. Pappalardo, A. Rando, M. Capuano, P. Di Gregorio, and G. Cosenza. 1995. Un gene ad effetto maggiore sul contenuto di caseina β nel latte di capra. Proc. XI Congr. Naz. A.S.P.A. 185-186.
35. Rando, A., L. Ramunno, and P. Masina. 2000. Mutations in casein genes. Zoot. Nutriz. Anim. 26:105-114.
36. Raymond, M., and F. Rousset. 1995. GENEPOP (version 1.2): Population genetics software for exact tests and ecumenicism. J. Hered. 86:248-249.
37. Richardson, B. C., and L. K. Creamer. 1976. Comparative micelle structure v. the isolation and characterization of the major ovine caseins. NZ J. Dairy Sci. Technol. 11:46-53.
38. Russo, V., L. Chiofalo, and P. Micari. 1979. Polimorfismo delle proteine del latte nelle pecore di razza Comisana. Riv. Zoot. Vet. 4:239-244.
39. Threadgill, D. W., and J. E. Womack. 1990. Genomic analysis of the major bovine milk proteins genes. Nucleic Acids Res. 18:6935-6942.
40. Xie, X., and J. Ott. 1993. Testing linkage disequilibrium between a disease gene and marker loci. Am. J. Human. Genet. 53:1107.
41. Yahyaoui, M. H., A. Angiolillo, F. Pilla, A. Sanchez, and J. M. Folch. 2003. Characterization and genotyping of the caprine kappa casein variants. J. Dairy Sci. 86:2715-2720.
42. Yahyaoui, M. H., A. Coll, A. Sanchez, and J. M. Folch. 2001. Genetic polymorphism of the caprine kappa casein gene. J. Dairy Res. 68:209-216.