Centromere structures highlighted by the 100%-complete Cyanidioschyzon merolae genome

Plant Signaling and Behavior

Volumn 3, Issue 2, 2008, Pages 140-141

  Maruyama, Shinichiro ^a   Matsuzaki, Motomichi ^a   Kuroiwa, Haruko ^b   Miyagishima, Shin Ya ^c   Tanaka, Kan ^a   Kuroiwa, Tsuneyoshi ^b   Nozaki, Hisayoshi ^a  

^a UNIVERSITY OF TOKYO   (Japan)

^b RIKKYO UNIVERSITY   (Japan)

^c RIKEN   (Japan)

Author keywords

Centromere; Chromosome structure; Complete nuclear genome; Cyanidioschyzon; Repetitive DNA

Indexed keywords

ALGAE; CYANIDIOSCHYZON; CYANIDIOSCHYZON MEROLAE; RHODOPHYTA;

EID: 42249101939     PISSN: 15592316     EISSN: 15592324     Source Type: Journal    
DOI: 10.4161/psb.3.2.5066     Document Type: Article

References (11)

1. Sullivan BA, Blower MD, Karpen GH. Determining centromere identity: Cyclical stories and forking paths. Nat Rev Genet 2001; 2:584-96.
2. Maruyama S, Kuroiwa H, Miyagishima SY, Tanaka K, Kuroiwa T. Centromere dynamics in the primitive red alga Cyanidioschyzon merolae. Plant J 2007; 49:1122-9.
3. Matsuzaki M, Misumi O, Shin-I T, Maruyama S, Takahara M, Miyagishima SY, Mori T, Nishida K, Yagisawa F, Nishida K, Yoshida Y, Nishimura Y, Nakao S, Kobayashi T, Momoyama Y, Higashiyama T, Minoda A, Sano M, Nomoto H, Oishi K, Hayashi H, Ohta F, Nishizaka S, Haga S, Miura S, Morishita T, Kabeya Y, Terasawa K, Suzuki Y, Ishii Y, Asakawa S, Takano H, Ohta N, Kuroiwa H, Tanaka K, Shimizu N, Sugano S, Sato N, Nozaki H, Ogasawara N, Kohara Y, Kuroiwa T. Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D. Nature 2004; 428:653-7.
4. Nozaki H, Takano H, Misumi O, Terasawa K, Matuzald M, Maruyama S, Nishida K, Yagisawa F, Yoshida Y, Fujiwara T, Takio S, Tamura K, Chung SJ, Nakamura S, Kuroiwa H, Tanaka K, Sato N, Kuroiwa T. A 100%-complete sequence reveals unusually simple genomic features in the hot-spring red alga Cyanidioschyzon merolae. BMC Biol 2007; 5:28.
5. Maruyama S, Misumi O, Ishii Y, Asakawa S, Shimizu A, Sasaki T, Matsuzaki M, Shin-i T, Nozaki H, Kohara Y, Shimizu N, Kuroiwa T. The minimal eukaryotic ribosomal DNA units in the primitive red alga Cyanidioschyzon merolae. DNA Res 2004; 11:83-91.
6. Derelle E, Ferraz C, Rombaurs S, Rouze P, Worden AZ, Robbens S, Partensky F, Degroeve S, Echeynie S, Cooke R, Saeys Y, Wuyts J, Jabbari K, Bowler C, Panaud O, Piegu B, Ball SG, Ral JP, Bouget FY, Piganeau G, De Baets B, Picard A, Delseny M, Demaille J, Van de Peer Y, Moreau H. Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. Proc Natl Acad Sci USA 2006; 103:11647-52.
7. Benson G. Tandem repeats finder: A program to analyze DNA sequences. Nucleic Acids Res 1999; 27:573-80.
8. Kelly JM, McRobert L, Baker DA. Evidence on the chromosomal location of centromeric DNA in Plasmodium falciparum from etoposide-mediated topoisomerase-II cleavage. Proc Natl Acad Sci USA 2006; 103:6706-11.
9. Obado SO, Bot C, Nilsson D, Andersson B, Kelly JM. Repetitive DNA is associated with centromeric domains in Trypanosoma brucei but not Trypanosoma cruzi. Genome Biol 2007; 8:R37.
10. Sanyal K, Baum M, Carbon J. Centromeric DNA sequences in the pathogenic yeast Candida albicans are all different and unique. Proc Natl Acad Sci USA 2004; 101:11374-9.
11. Baum M, Sanyal K, Mishra PK, Thaler N, Carbon J. Formation of functional centromeric chromatin is specified epigenetically in Candida albicans. Proc Natl Acad Sci USA 2006; 103:14877-82.