메뉴 건너뛰기




Volumn 9, Issue SUPPL. 1, 2008, Pages

The unique probe selector: A comprehensive web service for probe design and oligonucleotide arrays

Author keywords

[No Author keywords available]

Indexed keywords

CROSS-HYBRIDIZATION; DISCRIMINATING POWER; GENE EXPRESSION STUDIES; GENETIC BACKGROUNDS; MOLECULAR SIGNATURES; NUCLEIC ACID HYBRIDIZATION; OLIGONUCLEOTIDE ARRAYS; PROBE CHARACTERISTICS;

EID: 41949125564     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-9-S1-S8     Document Type: Article
Times cited : (7)

References (16)
  • 1
    • 0023850178 scopus 로고
    • Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase
    • 10.1126/science.2448875 2448875
    • Saiki RK Gelfand DH Stoffel S Scharf SJ Higuchi R Horn GT Mullis KB Erlich HA Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase Science 1988, 239(4839):487-491 10.1126/ science.2448875 2448875
    • (1988) Science , vol.239 , Issue.4839 , pp. 487-491
    • Saiki, R.K.1    Gelfand, D.H.2    Stoffel, S.3    Scharf, S.J.4    Higuchi, R.5    Horn, G.T.6    Mullis, K.B.7    Erlich, H.A.8
  • 2
    • 0028806048 scopus 로고
    • Quantitative Monitoring of Gene Expression Patterns with a Complementary DNA Microarray
    • 10.1126/science.270.5235.467 7569999
    • Schena M Shalon D Davis RW Brown PO Quantitative Monitoring of Gene Expression Patterns with a Complementary DNA Microarray Science 1995, 270(5235):467-470 10.1126/science.270.5235.467 7569999
    • (1995) Science , vol.270 , Issue.5235 , pp. 467-470
    • Schena, M.1    Shalon, D.2    Davis, R.W.3    Brown, P.O.4
  • 3
    • 0036208669 scopus 로고    scopus 로고
    • OligoArray: Genome-scale oligonucleotide design for microarrays
    • 10.1093/bioinformatics/18.3.486 11934750
    • Rouillard JM Herbert CJ Zuker M OligoArray: Genome-scale oligonucleotide design for microarrays Bioinformatics 2002, 18(3):486-487 10.1093/ bioinformatics/18.3.486 11934750
    • (2002) Bioinformatics , vol.18 , Issue.3 , pp. 486-487
    • Rouillard, J.M.1    Herbert, C.J.2    Zuker, M.3
  • 4
    • 0038239283 scopus 로고    scopus 로고
    • OligoArray 2.0: Design of oligonucleotide probes for DNA microarrays using a thermodynamic approach
    • 162330 12799432 10.1093/nar/gkg426
    • Rouillard JM Zuker M Gulari E OligoArray 2.0: Design of oligonucleotide probes for DNA microarrays using a thermodynamic approach Nucleic Acids Research 2003, 31(12):3057-3062 162330 12799432 10.1093/nar/gkg426
    • (2003) Nucleic Acids Research , vol.31 , Issue.12 , pp. 3057-3062
    • Rouillard, J.M.1    Zuker, M.2    Gulari, E.3
  • 5
    • 16344370555 scopus 로고    scopus 로고
    • GoArrays: Highly dynamic and efficient microarray probe design
    • 10.1093/bioinformatics/bti112 15531611
    • Rimour S Hill D Militon C Peyret P GoArrays: Highly dynamic and efficient microarray probe design Bioinformatics 2005, 21(7):1094-1103 10.1093/bioinformatics/bti112 15531611
    • (2005) Bioinformatics , vol.21 , Issue.7 , pp. 1094-1103
    • Rimour, S.1    Hill, D.2    Militon, C.3    Peyret, P.4
  • 6
    • 0037958765 scopus 로고    scopus 로고
    • Selection of oligonucleotide probes for protein coding sequences
    • 10.1093/bioinformatics/btg086 12724288
    • Wang X Seed B Selection of oligonucleotide probes for protein coding sequences Bioinformatics 2003, 19(7):796-802 10.1093/bioinformatics/ btg086 12724288
    • (2003) Bioinformatics , vol.19 , Issue.7 , pp. 796-802
    • Wang, X.1    Seed, B.2
  • 7
    • 1342303735 scopus 로고    scopus 로고
    • Expression profiling of the schizont and trophozoite stages of Plasmodium falciparum with a long-oligonucleotide microarray
    • 151308 12620119 10.1186/gb-2003-4-2-r9
    • Bozdech Z Zhu J Joachimiak M Cohen F Pulliam B DeRisi J Expression profiling of the schizont and trophozoite stages of Plasmodium falciparum with a long-oligonucleotide microarray Genome Biology 2003, 4(2):R9 151308 12620119 10.1186/gb-2003-4-2-r9
    • (2003) Genome Biology , vol.4 , Issue.2
    • Bozdech, Z.1    Zhu, J.2    Joachimiak, M.3    Cohen, F.4    Pulliam, B.5    DeRisi, J.6
  • 8
    • 10244229783 scopus 로고    scopus 로고
    • Picky: Oligo microarray design for large genomes
    • 10.1093/bioinformatics/bth347 15180932
    • Chou HH Hsia AP Mooney DL Schnable PS Picky: Oligo microarray design for large genomes Bioinformatics 2004, 20(17):2893-2902 10.1093/ bioinformatics/bth347 15180932
    • (2004) Bioinformatics , vol.20 , Issue.17 , pp. 2893-2902
    • Chou, H.H.1    Hsia, A.P.2    Mooney, D.L.3    Schnable, P.S.4
  • 9
    • 23144447636 scopus 로고    scopus 로고
    • OligoWiz 2.0 - Integrating sequence feature annotation into the design of microarray probes
    • Web Server 1160160 15980547 10.1093/nar/gki399
    • Wernersson R Nielsen HB OligoWiz 2.0 - integrating sequence feature annotation into the design of microarray probes Nucleic Acids Res 2005, 33(Web Server):W611-615 1160160 15980547 10.1093/nar/gki399
    • (2005) Nucleic Acids Res
    • Wernersson, R.1    Nielsen, H.B.2
  • 10
    • 0036952918 scopus 로고    scopus 로고
    • Oligodb - Interactive design of oligo DNA for transcription profiling of human genes
    • 10.1093/bioinformatics/18.12.1686
    • Mrowka R Schuchhardt J Gille C Oligodb - interactive design of oligo DNA for transcription profiling of human genes Bioinformatics 2002, 18(12):1686-1687 10.1093/bioinformatics/18.12.1686 12490455
    • (2002) Bioinformatics , vol.18 , Issue.12 , pp. 1686-1687
    • Mrowka, R.1    Schuchhardt, J.2    Gille, C.3
  • 11
    • 0043122991 scopus 로고    scopus 로고
    • Primer Design Assistant (PDA): A web-based primer design tool
    • 168967 12824410 10.1093/nar/gkg560
    • Chen SH Lin CY Cho CS Lo CZ Hsiung CA Primer Design Assistant (PDA): A web-based primer design tool Nucl Acids Res 2003, 31(13):3751-3754 168967 12824410 10.1093/nar/gkg560
    • (2003) Nucl Acids Res , vol.31 , Issue.13 , pp. 3751-3754
    • Chen, S.H.1    Lin, C.Y.2    Cho, C.S.3    Lo, C.Z.4    Hsiung, C.A.5
  • 12
    • 33845595244 scopus 로고    scopus 로고
    • Specific Primers for Rapid Detection of Microsporum audouinii by PCR in Clinical Samples
    • 1698423 17005755 10.1128/JCM.00759-06
    • Roque HD Vieira R Rato S Luz-Martins M Specific Primers for Rapid Detection of Microsporum audouinii by PCR in Clinical Samples J Clin Microbiol 2006, 44(12):4336-4341 1698423 17005755 10.1128/JCM.00759-06
    • (2006) J Clin Microbiol , vol.44 , Issue.12 , pp. 4336-4341
    • Roque, H.D.1    Vieira, R.2    Rato, S.3    Luz-Martins, M.4
  • 14
    • 23144440350 scopus 로고    scopus 로고
    • DINAMelt web server for nucleic acid melting prediction
    • 10.1093/nar/gki591
    • Markham NR Zuker M DINAMelt web server for nucleic acid melting prediction Nucl Acids Res 2005, 33(suppl 2):W577-581 10.1093/nar/gki591
    • (2005) Nucl Acids Res , vol.33 , Issue.SUPPL. 2
    • Markham, N.R.1    Zuker, M.2
  • 15
    • 0032539693 scopus 로고    scopus 로고
    • A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics
    • 19045 9465037 10.1073/pnas.95.4.1460
    • SantaLucia J Jr A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics PNAS 1998, 95(4):1460-1465 19045 9465037 10.1073/pnas.95.4.1460
    • (1998) PNAS , vol.95 , Issue.4 , pp. 1460-1465
    • SantaLucia Jr., J.1
  • 16
    • 27244449595 scopus 로고    scopus 로고
    • Selection of optimal oligonucleotide probes for microarrays using multiple criteria, global alignment and parameter estimation
    • 1266071 16246912 10.1093/nar/gki914
    • Li X He Z Zhou J Selection of optimal oligonucleotide probes for microarrays using multiple criteria, global alignment and parameter estimation Nucl Acids Res 2005, 33(19):6114-6123 1266071 16246912 10.1093/nar/gki914
    • (2005) Nucl Acids Res , vol.33 , Issue.19 , pp. 6114-6123
    • Li, X.1    He, Z.2    Zhou, J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.