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Volumn 34, Issue 2, 2004, Pages 105-116

Genetic diversity and population dynamics of cyanophage communities in the Chesapeake Bay

Author keywords

Cyanophage; Natural virus community; Phylogenetic diversity; Synechococcus; T RFLP

Indexed keywords

PROKARYOTA; SYNECHOCOCCUS;

EID: 4143150674     PISSN: 09483055     EISSN: None     Source Type: Journal    
DOI: 10.3354/ame034105     Document Type: Article
Times cited : (68)

References (39)
  • 2
    • 0027995162 scopus 로고
    • A molecular technique for identification of bacteria using small subunit ribosomal RNA sequences
    • Avaniss-Aghajani E, Jones K, Chapman D, Brunk C (1994) A molecular technique for identification of bacteria using small subunit ribosomal RNA sequences. Biotechniques 17:144-149
    • (1994) Biotechniques , vol.17 , pp. 144-149
    • Avaniss-Aghajani, E.1    Jones, K.2    Chapman, D.3    Brunk, C.4
  • 3
    • 0024475207 scopus 로고
    • High abundance of viruses found in aquatic environments
    • Bergh O, Borsheim KY, Bratbak G, Heldal M (1989) High abundance of viruses found in aquatic environments. Nature 340:467-468
    • (1989) Nature , vol.340 , pp. 467-468
    • Bergh, O.1    Borsheim, K.Y.2    Bratbak, G.3    Heldal, M.4
  • 4
    • 0029975159 scopus 로고    scopus 로고
    • A genetic manipulation system for oceanic cyanobacteria of the genus Synechococcus
    • Brahamsha B (1996) A genetic manipulation system for oceanic cyanobacteria of the genus Synechococcus. Appl Environ Microbiol 62:1747-1751
    • (1996) Appl Environ Microbiol , vol.62 , pp. 1747-1751
    • Brahamsha, B.1
  • 6
    • 0029762609 scopus 로고    scopus 로고
    • Genetic diversity in marine algal virus communities as revealed by sequence analysis of DNA polymerase genes
    • Chen F, Suttle CA, Short SM (1996) Genetic diversity in marine algal virus communities as revealed by sequence analysis of DNA polymerase genes. Appl Environ Microbiol 62:2869-2874
    • (1996) Appl Environ Microbiol , vol.62 , pp. 2869-2874
    • Chen, F.1    Suttle, C.A.2    Short, S.M.3
  • 7
    • 0035143656 scopus 로고    scopus 로고
    • Enumeration of viruses in aquatic environments using SYBR gold stain: Application of digital image analysis and flow cytometer
    • Chen F, Lu JR, Binder B, Hodson RE (2001) Enumeration of viruses in aquatic environments using SYBR gold stain: application of digital image analysis and flow cytometer. Appl Environ Microbiol 67:539-545
    • (2001) Appl Environ Microbiol , vol.67 , pp. 539-545
    • Chen, F.1    Lu, J.R.2    Binder, B.3    Hodson, R.E.4
  • 8
    • 0033542481 scopus 로고    scopus 로고
    • Marine viruses and their biogeochemical and ecological effects
    • Fuhrman JA (1999) Marine viruses and their biogeochemical and ecological effects. Nature 399:541-547
    • (1999) Nature , vol.399 , pp. 541-547
    • Fuhrman, J.A.1
  • 9
    • 0001873849 scopus 로고
    • Viruses in marine planktonic systems
    • Fuhrman JA, Suttle CA (1993) Viruses in marine planktonic systems. Oceanography 6:51-63
    • (1993) Oceanography , vol.6 , pp. 51-63
    • Fuhrman, J.A.1    Suttle, C.A.2
  • 10
    • 0031776161 scopus 로고    scopus 로고
    • Occurrence of a sequence in marine cyanophages similar to that of T4 g20 and its application to PCR-based detection and quantification techniques
    • Fuller NJ, Wilson WH, Joint IR, Mann NH (1998) Occurrence of a sequence in marine cyanophages similar to that of T4 g20 and its application to PCR-based detection and quantification techniques. Appl Environ Microbiol 64:2051-2060
    • (1998) Appl Environ Microbiol , vol.64 , pp. 2051-2060
    • Fuller, N.J.1    Wilson, W.H.2    Joint, I.R.3    Mann, N.H.4
  • 11
    • 0035040382 scopus 로고    scopus 로고
    • Terminal restriction fragment patterns: A tool for comparing microbial communities and assessing community dynamics
    • Kitts CL (2001) Terminal restriction fragment patterns: a tool for comparing microbial communities and assessing community dynamics. Curr Issues Intest Microbiol 2:17-25
    • (2001) Curr Issues Intest Microbiol , vol.2 , pp. 17-25
    • Kitts, C.L.1
  • 12
    • 0028163796 scopus 로고
    • Primary production of prochlorophytes, cyanobacteria, and eukaryotic ultraphytoplankton: Measurements from flow cytometric sorting
    • Li WKW (1994) Primary production of prochlorophytes, cyanobacteria, and eukaryotic ultraphytoplankton: measurements from flow cytometric sorting. Limnol Oceanogr 39:169-175
    • (1994) Limnol Oceanogr , vol.39 , pp. 169-175
    • Li, W.K.W.1
  • 13
    • 0030661563 scopus 로고    scopus 로고
    • Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA
    • Liu WT, Marsh TL, Cheng H, Forney LJ (1997) Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA. Appl Environ Microbiol 63:4516-4522
    • (1997) Appl Environ Microbiol , vol.63 , pp. 4516-4522
    • Liu, W.T.1    Marsh, T.L.2    Cheng, H.3    Forney, L.J.4
  • 14
    • 0035403340 scopus 로고    scopus 로고
    • Distribution, isolation, host specificity, and diversity of cyanophages infecting marine Synechococcus spp. in the Georgia river estuaries
    • Lu J, Chen F, Hodson RE (2001) Distribution, isolation, host specificity, and diversity of cyanophages infecting marine Synechococcus spp. in the Georgia river estuaries. Appl Environ Microbiol 67:3285-3290
    • (2001) Appl Environ Microbiol , vol.67 , pp. 3285-3290
    • Lu, J.1    Chen, F.2    Hodson, R.E.3
  • 15
    • 0033152351 scopus 로고    scopus 로고
    • Terminal restriction fragment length polymorphism (T-RFLP): An emerging method for characterizing diversity among homologous populations of amplicons
    • Marsh TL (1999) Terminal restriction fragment length polymorphism (T-RFLP): an emerging method for characterizing diversity among homologous populations of amplicons. Curr Opin Microbiol 2:323-327
    • (1999) Curr Opin Microbiol , vol.2 , pp. 323-327
    • Marsh, T.L.1
  • 16
    • 0002951250 scopus 로고
    • Phages of cyanobacteria
    • Calendar R (ed) Plenum Press, New York
    • Martin E, Benson R (1988) Phages of cyanobacteria. In: Calendar R (ed) The bacteriophages, Vol 2. Plenum Press, New York, p 607-645
    • (1988) The Bacteriophages , vol.2 , pp. 607-645
    • Martin, E.1    Benson, R.2
  • 18
    • 4143086234 scopus 로고    scopus 로고
    • Genetic fingerprinting of microbial communities - Present status and future perspectives
    • Bell CR, Brylinsky M, Johnson-Green P (eds) Proc 8th Int Symp Microb Ecol. Halifax, Canada. Atlantic Canada Society for Microbial Ecology, Kentville
    • Muyzer G (2000) Genetic fingerprinting of microbial communities - present status and future perspectives. In: Bell CR, Brylinsky M, Johnson-Green P (eds) Microbial Biosystems: New Frontiers. Proc 8th Int Symp Microb Ecol. Halifax, Canada. Atlantic Canada Society for Microbial Ecology, Kentville, p 503-512
    • (2000) Microbial Biosystems: New Frontiers , pp. 503-512
    • Muyzer, G.1
  • 19
    • 0027460328 scopus 로고
    • Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
    • Muyzer G, de Waal EC, Uitterlinden AG (1993) Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl Environ Microbiol 59:695-700
    • (1993) Appl Environ Microbiol , vol.59 , pp. 695-700
    • Muyzer, G.1    De Waal, E.C.2    Uitterlinden, A.G.3
  • 20
    • 0034547801 scopus 로고    scopus 로고
    • An evaluation of terminal-restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics
    • Osborn AM, Moore ERB, Timmis KN (2000) An evaluation of terminal-restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics. Environ Microbiol 2:39-50
    • (2000) Environ Microbiol , vol.2 , pp. 39-50
    • Osborn, A.M.1    Moore, E.R.B.2    Timmis, K.N.3
  • 21
    • 0033170542 scopus 로고    scopus 로고
    • Microbial gene transfer: An ecological perspective
    • Paul JH (1999) Microbial gene transfer: an ecological perspective. J Mol Microbiol Biotechnol 1:45-50
    • (1999) J Mol Microbiol Biotechnol , vol.1 , pp. 45-50
    • Paul, J.H.1
  • 22
    • 0025198355 scopus 로고
    • Viral mortality of marine bacteria and cyanobacteria
    • Proctor LM, Fuhrman JA (1990) Viral mortality of marine bacteria and cyanobacteria. Nature 343:60-62
    • (1990) Nature , vol.343 , pp. 60-62
    • Proctor, L.M.1    Fuhrman, J.A.2
  • 24
    • 0001931519 scopus 로고    scopus 로고
    • Cyanophages and their role in the ecology of cyanobacteria
    • Whitton BA, Potts M (eds) Kluwer Academic Publishers, Boston
    • Suttle CA (2000) Cyanophages and their role in the ecology of cyanobacteria. In: Whitton BA, Potts M (eds) The ecology of cyanobacteria: their diversity in time and space. Kluwer Academic Publishers, Boston, p 563-589
    • (2000) The Ecology of Cyanobacteria: Their Diversity in Time and Space , pp. 563-589
    • Suttle, C.A.1
  • 25
    • 0027802137 scopus 로고
    • Marine cyanophages infecting oceanic and coastal strains of Synechococcus: Abundance, morphology, cross-reactivity and growth characteristics
    • Suttle CA, Chan AM (1993) Marine cyanophages infecting oceanic and coastal strains of Synechococcus: abundance, morphology, cross-reactivity and growth characteristics. Mar Ecol Prog Ser 92:99-109
    • (1993) Mar Ecol Prog Ser , vol.92 , pp. 99-109
    • Suttle, C.A.1    Chan, A.M.2
  • 26
    • 0027930755 scopus 로고
    • Dynamics and distribution of cyanophages and their effect on marine Synechococcus spp.
    • Suttle CA, Chan AM (1994) Dynamics and distribution of cyanophages and their effect on marine Synechococcus spp. Appl Environ Microbiol 60:3167-3174
    • (1994) Appl Environ Microbiol , vol.60 , pp. 3167-3174
    • Suttle, C.A.1    Chan, A.M.2
  • 27
    • 0025197488 scopus 로고
    • Infection of phytoplankton by viruses and reduction of primary productivity
    • Suttle CA, Chan AM, Cottrell MT (1990) Infection of phytoplankton by viruses and reduction of primary productivity. Nature 347:467-469
    • (1990) Nature , vol.347 , pp. 467-469
    • Suttle, C.A.1    Chan, A.M.2    Cottrell, M.T.3
  • 28
    • 0027871357 scopus 로고
    • Are viruses important partners in pelagic food webs?
    • Thingstad TF, Heldal M, Bratbak G, Dundas I (1993) Are viruses important partners in pelagic food webs? TREE 8:209-213
    • (1993) TREE , vol.8 , pp. 209-213
    • Thingstad, T.F.1    Heldal, M.2    Bratbak, G.3    Dundas, I.4
  • 29
    • 0027329223 scopus 로고
    • Resistance to co-occurring phages enables marine Synechococcus communities to coexist with cyanophages abundant in seawater
    • Waterbury JB, Valois FW (1993) Resistance to co-occurring phages enables marine Synechococcus communities to coexist with cyanophages abundant in seawater. Appl Environ Microbiol 59:3393-3399
    • (1993) Appl Environ Microbiol , vol.59 , pp. 3393-3399
    • Waterbury, J.B.1    Valois, F.W.2
  • 30
    • 77957057853 scopus 로고
    • Isolation and growth of marine planktonic cyanobacteria
    • Waterbury JB, Willey JM (1988) Isolation and growth of marine planktonic cyanobacteria. Methods Enzymol 167:100-105
    • (1988) Methods Enzymol , vol.167 , pp. 100-105
    • Waterbury, J.B.1    Willey, J.M.2
  • 31
    • 0002523795 scopus 로고
    • Biological and ecological characterization of the marine unicellular cyanobacterium Synechococcus
    • Toronto
    • Waterbury JB, Watson SW, Valois FW, Franks DG (1986) Biological and ecological characterization of the marine unicellular cyanobacterium Synechococcus. Can Bull Fish Aquat Sci, Toronto, p 71-120
    • (1986) Can Bull Fish Aquat Sci , pp. 71-120
    • Waterbury, J.B.1    Watson, S.W.2    Valois, F.W.3    Franks, D.G.4
  • 32
    • 0032858844 scopus 로고    scopus 로고
    • Viruses and nutrient cycles in the sea: Viruses play critical roles in the structure and function of aquatic food webs
    • Wilhelm SW, Suttle CA (1999) Viruses and nutrient cycles in the sea: viruses play critical roles in the structure and function of aquatic food webs. BioScience 49:781-788
    • (1999) BioScience , vol.49 , pp. 781-788
    • Wilhelm, S.W.1    Suttle, C.A.2
  • 33
    • 0027376914 scopus 로고
    • Isolation and molecular characterization of five marine cyanophages propagated on Synechococcus sp. strain WH7803
    • Wilson WH, Joint IR, Carr NG, Mann NH (1993) Isolation and molecular characterization of five marine cyanophages propagated on Synechococcus sp. strain WH7803. Appl Environ Microbiol 59:3736-3742
    • (1993) Appl Environ Microbiol , vol.59 , pp. 3736-3742
    • Wilson, W.H.1    Joint, I.R.2    Carr, N.G.3    Mann, N.H.4
  • 34
    • 0001571054 scopus 로고    scopus 로고
    • Analysis of cyanophage diversity and population structure in a south-north transect of the Atlantic Ocean
    • Wilson WH, Nicholas JF, Joint IR, Mann NH (1999) Analysis of cyanophage diversity and population structure in a south-north transect of the Atlantic Ocean. Bull Inst Océanogr 19:209-216
    • (1999) Bull Inst Océanogr , vol.19 , pp. 209-216
    • Wilson, W.H.1    Nicholas, J.F.2    Joint, I.R.3    Mann, N.H.4
  • 35
    • 0001001348 scopus 로고    scopus 로고
    • Analysis of cyanophage diversity in the marine environment using denaturing gradient gel electrophoresis
    • Bell CR, Brylinsky M, Johnson-Green P (eds) Proc 8th Int Symp Microb Ecol. Halifax, Canada. Atlantic Canada Society for Microbial Ecology, Kentville
    • Wilson WH, Nicholas JF, Joint IR, Mann NH (2000) Analysis of cyanophage diversity in the marine environment using denaturing gradient gel electrophoresis. In: Bell CR, Brylinsky M, Johnson-Green P (eds) Microbial biosystems: New Frontier. Proc 8th Int Symp Microb Ecol. Halifax, Canada. Atlantic Canada Society for Microbial Ecology, Kentville, p 565-570
    • (2000) Microbial Biosystems: New Frontier , pp. 565-570
    • Wilson, W.H.1    Nicholas, J.F.2    Joint, I.R.3    Mann, N.H.4
  • 36
  • 37
    • 0032959665 scopus 로고    scopus 로고
    • Population dynamics of Chesapeake Bay virioplankton: Total community analysis using pulsed field gel electrophoresis
    • Wommack KE, Ravel J, Hill RT, Colwell RR (1999a) Population dynamics of Chesapeake Bay virioplankton: total community analysis using pulsed field gel electrophoresis. Appl Environ Microbiol 65:231-240
    • (1999) Appl Environ Microbiol , vol.65 , pp. 231-240
    • Wommack, K.E.1    Ravel, J.2    Hill, R.T.3    Colwell, R.R.4
  • 39
    • 0036211846 scopus 로고    scopus 로고
    • Phylogenetic diversity of marine cyanophage isolates and natural virus communities as revealed by sequences of viral capsid assembly protein gene g20
    • Zhong Y, Chen F, Wilhelm SW, Poorvin L, Hodson RE (2002) Phylogenetic diversity of marine cyanophage isolates and natural virus communities as revealed by sequences of viral capsid assembly protein gene g20. Appl Environ Microbiol 68:1576-1584
    • (2002) Appl Environ Microbiol , vol.68 , pp. 1576-1584
    • Zhong, Y.1    Chen, F.2    Wilhelm, S.W.3    Poorvin, L.4    Hodson, R.E.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.