-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
S.F. Altschul, T.L. Madden, A.A. Schaffer, J. Zhang, Z. Zhang, W. Miller, and D.J. Lipman Gapped BLAST and PSI-BLAST: a new generation of protein database search programs Nucleic Acids Res. 25 1997 3389 3402
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller6
Lipman, D.J.W.7
-
2
-
-
0033805703
-
Construction and characterization of a Mycobacterium tuberculosis mutant lacking the alternate sigma factor gene, sigF
-
P. Chen, R.E Ruiz, Q. Li, R.F. Silver, and W.R. Bishai Construction and characterization of a Mycobacterium tuberculosis mutant lacking the alternate sigma factor gene, sigF Infect. Immun. 68 2000 5575 5580
-
(2000)
Infect. Immun.
, vol.68
, pp. 5575-5580
-
-
Chen, P.1
Ruiz, R.E.2
Li, Q.3
Silver4
Bishai, W.R.R.F.5
-
3
-
-
0032508046
-
Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence
-
S.T. Cole, R. Brosc, J. Parkhill, T. Garnier, C. Churcher, D. Harris, S.V. Gordon, K. Eiglmeier, S. Gas, C.E. Barry III, F. Tekaia, K. Badcock, D. Basham, D. Brown, T. Chillingworth, R. Connor, R. Davies, K. Devlin, T. Feltwell, S. Gentles, N. Hamlin, S. Holroyd, T. Hornsby, K. Jagels, A. Krogh, J. McLean, S. Moule, L. Murphy, K. Oliver, J. Osborne, M.-A. Rajandream, J. Rogers, S. Rutter, K. Seeger, J. Skelton, R. Squares, S. Squares, J.E. Sulston, K. Taylor, S. Whitehead, and B.G. Barrell Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence Nature 393 1998 537 544
-
(1998)
Nature
, vol.393
, pp. 537-544
-
-
Cole, S.T.1
Brosc, R.2
Parkhill, J.3
Garnier, T.4
Churcher, C.5
Harris, D.6
Gordon, S.V.7
Eiglmeier, K.8
Gas, S.9
Barry III, C.E.10
Tekaia, F.11
Badcock, K.12
Basham, D.13
Brown, D.14
Chillingworth, T.15
Connor, R.16
Davies, R.17
Devlin, K.18
Feltwell, T.19
Gentles, S.20
Hamlin, N.21
Holroyd, S.22
Hornsby, T.23
Jagels, K.24
Krogh, A.25
McLean, J.26
Moule, S.27
Murphy, L.28
Oliver, K.29
Osborne, J.30
Rajandream, M.-A.31
Rogers, J.32
Rutter, S.33
Seeger, K.34
Skelton, J.35
Squares, R.36
Squares, S.37
Sulston, J.E.38
Taylor, K.39
Whitehead40
Barrell, B.G.S.41
more..
-
4
-
-
0029981245
-
A stationary-phase stressâ€"response sigma factor from Mycobacterium tuberculosis
-
J. DeMaio, Y. Zhang, C. Ko, D.B. Young, and W.R. Bishai A stationary-phase stressâ€"response sigma factor from Mycobacterium tuberculosis Proc. Natl. Acad. Sci. USA 93 1996 2790 2794
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 2790-2794
-
-
Demaio, J.1
Zhang, Y.2
Ko, C.3
Young4
Bishai, W.R.D.B.5
-
5
-
-
0021186912
-
Susceptibility of Mycobacterium intracellulare to hydrogen peroxide
-
P.R. Gangadharam, and P.E. Pratt Susceptibility of Mycobacterium intracellulare to hydrogen peroxide Am. Rev. Respir. Dis. 130 1984 309 311
-
(1984)
Am. Rev. Respir. Dis.
, vol.130
, pp. 309-311
-
-
Gangadharam1
Pratt, P.E.P.R.2
-
6
-
-
0031398423
-
Sigma factors of Mycobacterium tuberculosis
-
J.E. Gomez, J.M. Chen, and W.R. Bishai Sigma factors of Mycobacterium tuberculosis Tuber. Lung Dis. 78 1997 175 183
-
(1997)
Tuber. Lung Dis.
, vol.78
, pp. 175-183
-
-
Gomez, J.E.1
Chen2
Bishai, W.R.J.M.3
-
7
-
-
0020451991
-
Role of lipid content and hydrogen peroxide susceptibility in determining the guinea-pig virulence of Mycobacterium tuberculosis
-
M.B. Goren, J.M. Grange, V.R. Aber, B.W. Allen, and D.A. Mitchison Role of lipid content and hydrogen peroxide susceptibility in determining the guinea-pig virulence of Mycobacterium tuberculosis Br. J. Exp. Pathol. 6 1982 693 700
-
(1982)
Br. J. Exp. Pathol.
, vol.6
, pp. 693-700
-
-
Goren, M.B.1
Grange, J.M.2
Aber, V.R.3
Allen4
Mitchison, D.A.B.W.5
-
8
-
-
0027248433
-
Characterization of the katG gene encoding a catalase-peroxidase required for the isoniazid susceptibility of Mycobacterium tuberculosis
-
B. Heym, Y. Zhang, S. Poulet, D. Young, and S.T. Cole Characterization of the katG gene encoding a catalase-peroxidase required for the isoniazid susceptibility of Mycobacterium tuberculosis J. Bacteriol. 175 1993 4255 4259
-
(1993)
J. Bacteriol.
, vol.175
, pp. 4255-4259
-
-
Heym, B.1
Zhang, Y.2
Poulet, S.3
Young4
Cole, S.T.D.5
-
9
-
-
0030910419
-
Effects of overexpression of the alkyl-hydroperoxide reductase AhpC on the virulence and isoniazid resistance of Mycobacterium tuberculosis
-
B. Heym, E. Stavropoulos, N. Honore, P. Domenech, B. Saint-Joanis, T.M. Wilson, D.M. Collins, M.J. Colston, and S.T. Cole Effects of overexpression of the alkyl-hydroperoxide reductase AhpC on the virulence and isoniazid resistance of Mycobacterium tuberculosis Infect. Immun. 65 1997 1395 1401
-
(1997)
Infect. Immun.
, vol.65
, pp. 1395-1401
-
-
Heym, B.1
Stavropoulos, E.2
Honore, N.3
Domenech, P.4
Saint-Joanis, B.5
Wilson, T.M.6
Collins, D.M.7
Colston8
Cole, S.T.M.J.9
-
10
-
-
0031912339
-
Protein synthesis is shutdown in dormant Mycobacterium tuberculosis and is reversed by oxygen or heat shock
-
Y.M. Hu, P.D. Butcher, K. Sole, D.A. Mitchison, and A.R.M. Coates Protein synthesis is shutdown in dormant Mycobacterium tuberculosis and is reversed by oxygen or heat shock FEMS Microbiol. Lett. 158 1998 139 145
-
(1998)
FEMS Microbiol. Lett.
, vol.158
, pp. 139-145
-
-
Hu, Y.M.1
Butcher, P.D.2
Sole, K.3
Mitchison4
Coates, A.R.M.D.A.5
-
11
-
-
0032954835
-
Transcription of two sigma 70 homologue genes, sigA and sigB, in stationary-phase Mycobacterium tuberculosis
-
Y. Hu, and A.R.M. Coates Transcription of two sigma 70 homologue genes, sigA and sigB, in stationary-phase Mycobacterium tuberculosis J. Bacteriol. 181 1999 469 476
-
(1999)
J. Bacteriol.
, vol.181
, pp. 469-476
-
-
Hu1
Coates, A.R.M.Y.2
-
12
-
-
0035822573
-
Increased levels of sigJ mRNA in late stationary phase cultures of Mycobacterium tuberculosis detected by DNA array hybridisation
-
Y. Hu, and A.R.M. Coates Increased levels of sigJ mRNA in late stationary phase cultures of Mycobacterium tuberculosis detected by DNA array hybridisation FEMS Microbiol. Lett. 202 2001 59 65
-
(2001)
FEMS Microbiol. Lett.
, vol.202
, pp. 59-65
-
-
Hu1
Coates, A.R.M.Y.2
-
13
-
-
0033764350
-
Detection of mRNA transcripts and active transcription in Mycobacterium tuberculosis persistence induced by exposure to rifampicin or pyrazinamide
-
Y. Hu, J.A. Mangan, J. Dhillon, K.M. Sole, D.A. Mitchison, P.D. Butcher, and A.R.M. Coates Detection of mRNA transcripts and active transcription in Mycobacterium tuberculosis persistence induced by exposure to rifampicin or pyrazinamide J. Bacteriol. 182 2000 6358 6365
-
(2000)
J. Bacteriol.
, vol.182
, pp. 6358-6365
-
-
Hu, Y.1
Mangan, J.A.2
Dhillon, J.3
Sole, K.M.4
Mitchison, D.A.5
Butcher6
Coates, A.R.M.P.D.7
-
14
-
-
0023713630
-
Promoter selectivity of prokaryotic RNA polymerase
-
A. Ishihama Promoter selectivity of prokaryotic RNA polymerase Trends Genet. 4 1988 282 286
-
(1988)
Trends Genet.
, vol.4
, pp. 282-286
-
-
Ishihama, A.1
-
15
-
-
0017919142
-
Virulence and resistance to superoxide, low pH and hydrogen peroxide among strains of Mycobacterium tuberculosis
-
P.S. Jackett, V.R. Aber, and D.B. Lowrie Virulence and resistance to superoxide, low pH and hydrogen peroxide among strains of Mycobacterium tuberculosis J. Gen. Microbiol. 104 1978 37 45
-
(1978)
J. Gen. Microbiol.
, vol.104
, pp. 37-45
-
-
Jackett, P.S.1
Aber2
Lowrie, D.B.V.R.3
-
16
-
-
0037062452
-
Reduced immunopathology and mortality despite tissue persistence in a Mycobacterium tuberculosis mutant lacking alternative sigma factor, SigH
-
D. Kaushal, B.G. Schroeder, S. Tyagi, T. Yoshimatsu, C. Scott, C. Ko, L. Carpenter, J. Mehrotra, Y.C. Manabe, R.D. Fleischmann, and W.R. Bishai Reduced immunopathology and mortality despite tissue persistence in a Mycobacterium tuberculosis mutant lacking alternative sigma factor, SigH Proc. Natl. Acad. Sci. USA 99 2002 8330 8335
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 8330-8335
-
-
Kaushal, D.1
Schroeder, B.G.2
Tyagi, S.3
Yoshimatsu, T.4
Scott, C.5
Ko, C.6
Carpenter, L.7
Mehrotra, J.8
Manabe, Y.C.9
Fleischmann10
Bishai, W.R.R.D.11
-
17
-
-
0026323938
-
Site-specific integration of mycobacteriophage L5: Integration-proficient vectors for Mycobacterium smegmatis, Mycobacterium tuberculosis, and bacille Calmette-Guerin
-
M.H. Lee, L. Pascopella, W.R. Jacobs Jr., and G.F. Hatfull Site-specific integration of mycobacteriophage L5: integration-proficient vectors for Mycobacterium smegmatis, Mycobacterium tuberculosis, and bacille Calmette-Guerin Proc. Natl. Acad. Sci. USA 88 1991 3111 3115
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, pp. 3111-3115
-
-
Lee, M.H.1
Pascopella, L.2
Jacobs Jr., W.R.3
Hatfull, G.F.4
-
18
-
-
0028019587
-
The role of the sigma factor sigma S (KatF) in bacterial global regulation
-
P.C. Loewen, and R. Hengge-Aronis The role of the sigma factor sigma S (KatF) in bacterial global regulation Annu. Rev. Microbiol. 48 1994 53 80
-
(1994)
Annu. Rev. Microbiol.
, vol.48
, pp. 53-80
-
-
Loewen1
Hengge-Aronis, R.P.C.2
-
19
-
-
0032944213
-
Mycobacterium tuberculosis catalase and peroxidase activities and resistance to oxidative killing in human monocytes in vitro
-
C. Manca, S. Paul, C.E. Barry III, V.H. Freedman, and G. Kaplan Mycobacterium tuberculosis catalase and peroxidase activities and resistance to oxidative killing in human monocytes in vitro Infect. Immun. 67 1999 74 79
-
(1999)
Infect. Immun.
, vol.67
, pp. 74-79
-
-
Manca, C.1
Paul, S.2
Barry III, C.E.3
Freedman4
Kaplan, G.V.H.5
-
20
-
-
0034903883
-
The Mycobacterium tuberculosis ECF sigma factor sigmaE: Role in global gene expression and survival in macrophages
-
R. Manganelli, M.I. Voskuil, G.K. Schoolnik, and I. Smith The Mycobacterium tuberculosis ECF sigma factor sigmaE: role in global gene expression and survival in macrophages Mol. Microbiol. 41 2001 423 437
-
(2001)
Mol. Microbiol.
, vol.41
, pp. 423-437
-
-
Manganelli, R.1
Voskuil, M.I.2
Schoolnik3
Smith, I.G.K.4
-
21
-
-
0036065206
-
Role of the extracytoplasmic-function sigma factor sigma(H) in Mycobacterium tuberculosis global gene expression
-
R. Manganelli, M.I. Voskuil, G.K. Schoolnik, E. Dubnau, M. Gomez, and I. Smith Role of the extracytoplasmic-function sigma factor sigma(H) in Mycobacterium tuberculosis global gene expression Mol. Microbiol. 45 2002 365 374
-
(2002)
Mol. Microbiol.
, vol.45
, pp. 365-374
-
-
Manganelli, R.1
Voskuil, M.I.2
Schoolnik, G.K.3
Dubnau, E.4
Gomez5
Smith, I.M.6
-
22
-
-
0033065469
-
Exposure to antibiotics induces expression of the Mycobacterium tuberculosis sigF gene: Implications for chemotherapy against mycobacterial persistors
-
T.M. Michele, C. Ko, and W.R. Bishai Exposure to antibiotics induces expression of the Mycobacterium tuberculosis sigF gene: implications for chemotherapy against mycobacterial persistors Antimicrob. Agents Chemother. 43 1999 218 225
-
(1999)
Antimicrob. Agents Chemother.
, vol.43
, pp. 218-225
-
-
Michele, T.M.1
Ko2
Bishai, W.R.C.3
-
23
-
-
78651139593
-
Virulence in the guineapig, susceptibility to hydrogen peroxide, and catalase activity of isoniazidsensitive tubercle bacilli from South Indian and British patients
-
D.A. Mitchison, J.B. Selkon, and J. Lloyd Virulence in the guineapig, susceptibility to hydrogen peroxide, and catalase activity of isoniazidsensitive tubercle bacilli from South Indian and British patients J. Pathol. Bacteriol. 86 1963 377 386
-
(1963)
J. Pathol. Bacteriol.
, vol.86
, pp. 377-386
-
-
Mitchison, D.A.1
Selkon2
Lloyd, J.J.B.3
-
24
-
-
0023926020
-
A mouse model of the recrudescence of latent tuberculosis in the elderly
-
I.M. Orme A mouse model of the recrudescence of latent tuberculosis in the elderly Am. Rev. Respir. Dis. 137 1988 716 718
-
(1988)
Am. Rev. Respir. Dis.
, vol.137
, pp. 716-718
-
-
Orme, I.M.1
-
25
-
-
0031660550
-
Oxidative stress response and characterization of the oxyR-ahpC and furA-katG loci in Mycobacterium marinum
-
E. Pagan-Ramos, J. Song, M. McFalone, M.H. Mudd, and V. Deretic Oxidative stress response and characterization of the oxyR-ahpC and furA-katG loci in Mycobacterium marinum J. Bacteriol. 180 1998 4856 4864
-
(1998)
J. Bacteriol.
, vol.180
, pp. 4856-4864
-
-
Pagan-Ramos, E.1
Song, J.2
McFalone, M.3
Mudd4
Deretic, V.M.H.5
-
26
-
-
0003879240
-
Electroporation of Mycobacteria
-
T. Parish N.G. Stoker Humana press
-
T. Parish, and N.G. Stoker Electroporation of Mycobacteria T. Parish N.G. Stoker Mycobacteria Protocols 1998 Humana press
-
(1998)
Mycobacteria Protocols
-
-
Parish1
Stoker, N.G.T.2
-
27
-
-
0033880508
-
Use of a flexible cassette method to generate a double unmarked Mycobacterium tuberculosis tlyA plcABC mutant by gene replacement
-
T. Parish, and N.G. Stoker Use of a flexible cassette method to generate a double unmarked Mycobacterium tuberculosis tlyA plcABC mutant by gene replacement Microbiology 146 2000 1969 1975
-
(2000)
Microbiology
, vol.146
, pp. 1969-1975
-
-
Parish1
Stoker, N.G.T.2
-
28
-
-
0017107790
-
Dynamics of submerged growth of Mycobacterium tuberculosis under aerobic and microaerophilic conditions
-
L.G. Wayne Dynamics of submerged growth of Mycobacterium tuberculosis under aerobic and microaerophilic conditions Am. Rev. Respir. Dis. 114 1976 807 811
-
(1976)
Am. Rev. Respir. Dis.
, vol.114
, pp. 807-811
-
-
Wayne, L.G.1
|