Analyte-receptor binding on surface plasmon resonance biosensors: A fractal analysis of Cre-loxP interactions and the influence of Cl, O, and S on drug-liposome interactions

Analytical Biochemistry

Volumn 332, Issue 1, 2004, Pages 10-22

  Butala, Harshala D ^a   Tan, Yongqiang ^a   Sadana, Ajit ^a  

^a UNIVERSITY OF MISSISSIPPI   (United States)

Author keywords

Affinities; Association and dissociation rate coefficients; Drug liposome and Cre loxP interactions; Fractals

Indexed keywords

ASSOCIATION REACTIONS; ATOMS; BIOSENSORS; DISSOCIATION; DRUG INTERACTIONS; FRACTAL DIMENSION; FRACTALS; KINETICS; PLASMONS; SURFACE PLASMON RESONANCE;

AFFINITIES; ASSOCIATION KINETICS; COMPLEX CONCENTRATION; CRE-LOXP; DISSOCIATION KINETICS; DISSOCIATION RATES; SINGLE-FRACTAL ANALYSIS; SURFACE PLASMON RESONANCE BIOSENSOR;

DRUG DELIVERY;

ALPRENOLOL; CHLORINE; CINCHOCAINE; CYCLIZINE; DESIPRAMINE; DRUG; HYDROCHLOROTHIAZIDE; IMIPRAMINE; KETOPROFEN; LIPOSOME; NAPROXEN; OXYGEN; PROPRANOLOL DERIVATIVE; SULFUR; TETRACAINE; VERAPAMIL;

ARTICLE; BIOSENSOR; DIFFUSION; DISSOCIATION; FRACTAL ANALYSIS; MOLECULAR INTERACTION; MOLECULAR WEIGHT; PRIORITY JOURNAL; RECEPTOR BINDING; SURFACE PLASMON RESONANCE; SURFACE PROPERTY;

EID: 4143142134     PISSN: 00032697     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ab.2004.04.017     Document Type: Article

References (28)

1. Myszka D.G., Morton T.A., Doyle M.L., Chaiken I.M. Kinetic analysis of a protein antigen-antibody interaction limited by mass transfer on an optical biosensor. Biophys. Chem. 64:1997;127
2. Jonsson U., Fagerstam L., Ivarsson B., Johnsson B., Karlsson R., Lundh K., Lofas S., Persson B., Roos H., Ronnberg I. Real-time biospecific interaction analysis using a surface plasmon resonance and a sensor chip technology. Biotechniques. 11:1991;620
3. Biacore AB BIAEvaluation, 3.2 software (2002), Uppsala, Sweden
4. Ramakrishnan A., Sadana A. A single fractal analysis of cellular analyte-receptor binding kinetics utilizing biosensors. Biosystems. 59(1):2001;35
5. Ramakrishnan A., Sadana A. Analyte-receptor binding and dissociation kinetics for biosensor applications: a fractal analysis. Biosens. Bioelectron. 15(11-12):2000;651
6. Rufer A., Neuenschwander P.F., Sauer B. Analysis of Cre-loxP interaction by surface plasmon resonance: influence of spermidine on cooperativity. Anal. Biochem. 308:2002;90
7. Baird C.L., Courtenay E.S., Myszka D.G. Surface plasmon resonance characterization of drug/liposome interactions. Anal. Biochem. 310:2002;93
8. Sadana A., Sii D. Binding kinetics of antigen by immobilized antibody: influence of a variable rate coefficient on external diffusion limited kinetics. J. Colloid Interface Sci. 151:1992;166
9. Sadana A., Sii D. Binding kinetics of antigen by immobilized antibody: influence of reaction order and external diffusional limitations. Biosens. Bioelectron. 7:1992;559
10. Kopelman R. Fractal reaction kinetics. Science. 241:1998;1620
11. Sadana A., Beelaram A. Antigen-antibody diffusion-limited binding kinetics of biosensors: a fractal analysis. Biosens. Bioelectron. 10:1995;301
12. Sadana A., Beelaram A. Fractal analysis of antigen-antibody binding kinetics: biosensor applications. Biotechnol. Progr. 9:1994;45
13. J. Anderson, NIH Panel Review Meeting, Case Western reserve University, Cleveland, Ohio, July 1993
14. Sadana A., Vo-Dinh T. A kinetic analysis using fractals of cellular analyte-receptor binding and dissociation. Biotechnol. Appl. Biochem. 33:2001;17
15. de Gennes P.G. Diffusion-controlled reactions in polymer melts. Rad. Phys. Chem. 22:1982;193-196
16. Pfeifer P., Avnir D., Farin D.J. Molecular fractal structures. Nature (London). 308(5956):1984;261-263
17. Nyikos L., Pajkossy T. Diffusion to fractal surfaces. Electrochimica Acta. 31:1986;347
18. S. Havlin, Molecular diffusion and reaction, in: The fractal approach to heterogeneous chemistry: surfaces, colloids, polymers, Wiley, New York, 1989, pp. 251-269
19. Sigmaplot, Scientific Graphic Software, User's manual, Jandel Scientific, San Rafael, CA, 1993
20. Weiss G.H. Fractals in Science. 1994;Springer, Verlag, Berlin. p. 119
21. Li H.L., Chen S., Zhao H. Fractal mechanisms for the allosteric effects of proteins and enzyme. Biophys. J. 58:1990;1313-1320
22. Federov B.A., Federov B.B., Schmidt P.W. An analysis of the fractal properties of globular proteins. J. Chem. Phys. 99:1999;4076-4083
23. Dewey T.G., Bann J.G. Diffusion-controlled reaction in polymer melts. Biophys. J. 63:1992;594
24. Le Brecque M. To model the otherwise unmodelable. Mosaic. 23:1992;12
25. Lee C.K., Lee S.L. Multi-fractal scaling analysis of reactions over fractal surfaces. Surf. Sci. 325:1995;294
26. Sadana A., Chen Z. A fractal analysis of the influence of nonspecific binding of antigen-antibody binding kinetics for biosensor applications. Biosens. Bioelectron. 11(8):1996;769
27. Kilby N.J., Snaith M.R., Murray J.A. Site-specific recombinase tools for genomic research. Trends Genet. 9:1993;413
28. Myszka D.G., Rich R.L. Implementing surface plasmon resonance biosensors in drug discovery. Pharm. Sci. Technol. Today. 3:2000;310-317