-
1
-
-
0037434980
-
From genomics to proteomics
-
M. Tyers, and M. Mann From genomics to proteomics Nature 422 2003 193 197
-
(2003)
Nature
, vol.422
, pp. 193-197
-
-
Tyers1
Mann, M.M.2
-
2
-
-
0036545614
-
Complementary profiling of gene expression at the transcriptome and proteome levels in Saccharomyces cerevisiae
-
T.J. Griffin, S.P. Gygi, T. Ideker, B. Rist, J. Eng, L. Hood, and R. Aebersold Complementary profiling of gene expression at the transcriptome and proteome levels in Saccharomyces cerevisiae Mol Cell Proteomics 1 2002 323 333
-
(2002)
Mol Cell Proteomics
, vol.1
, pp. 323-333
-
-
Griffin, T.J.1
Gygi, S.P.2
Ideker, T.3
Rist, B.4
Eng, J.5
Hood6
Aebersold, R.L.7
-
3
-
-
0037435030
-
Mass spectrometry-based proteomics
-
R. Aebersold, and M. Mann Mass spectrometry-based proteomics Nature 422 2003 198 207
-
(2003)
Nature
, vol.422
, pp. 198-207
-
-
Aebersold1
Mann, M.R.2
-
4
-
-
0034662907
-
Evaluation of two-dimensional gel electrophoresis-based proteome analysis technology
-
S.P. Gygi, G.L. Corthals, Y. Zhang, Y. Rochon, and R. Aebersold Evaluation of two-dimensional gel electrophoresis-based proteome analysis technology Proc Natl Acad Sci USA 97 2000 9390 9395
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 9390-9395
-
-
Gygi, S.P.1
Corthals, G.L.2
Zhang, Y.3
Rochon4
Aebersold, R.Y.5
-
5
-
-
0037277179
-
Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: The yeast proteome
-
J. Peng, J.E. Elias, C.C. Thoreen, L.J. Licklider, and S.P. Gygi Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: the yeast proteome J Proteome Res 2 2003 43 50
-
(2003)
J Proteome Res
, vol.2
, pp. 43-50
-
-
Peng, J.1
Elias, J.E.2
Thoreen, C.C.3
Licklider4
Gygi, S.P.L.J.5
-
6
-
-
0037434975
-
Proteomics
-
M. Marte Proteomics Nature 422 2003 191
-
(2003)
Nature
, vol.422
, pp. 191
-
-
Marte, M.1
-
7
-
-
0141815733
-
Identification of proteins highly expressed in the hyphae of Candida albicans by two-dimensional electrophoresis
-
W. Choi, Y.J. Yoo, M. Kim, D. Shin, and H.B. Jeon Identification of proteins highly expressed in the hyphae of Candida albicans by two-dimensional electrophoresis Yeast 20 2003 1053 1060
-
(2003)
Yeast
, vol.20
, pp. 1053-1060
-
-
Choi, W.1
Yoo, Y.J.2
Kim, M.3
Shin4
Jeon, H.B.D.5
-
8
-
-
1242339581
-
Two-dimensional reference map of Candida albicans hyphal forms
-
R. Hernandez, C. Nombela, R. Diez-Orejas, and C. Gil Two-dimensional reference map of Candida albicans hyphal forms Proteomics 4 2004 374 382
-
(2004)
Proteomics
, vol.4
, pp. 374-382
-
-
Hernandez, R.1
Nombela, C.2
Diez-Orejas3
Gil, C.R.4
-
9
-
-
0032828315
-
Candida albicans pathogenicity: A proteomic perspective
-
M. Niimi, R.D. Cannon, and B.C. Monk Candida albicans pathogenicity: a proteomic perspective Electrophoresis 20 1999 2299 2308
-
(1999)
Electrophoresis
, vol.20
, pp. 2299-2308
-
-
Niimi, M.1
Cannon2
Monk, B.C.R.D.3
-
10
-
-
3543118467
-
Proteomic response to amino acid starvation in Candida albicans and Saccharomyces cerevisiae
-
press.
-
Yin Z, Stead D, Selway L, Walker J, Riba-Garcia I, Mclnerney T, Gaskell SJ, Oliver SG, Cash P, Brown AJP: Proteomic response to amino acid starvation in Candida albicans and Saccharomyces cerevisiae. Proteomics 2004, 4:in press. A comparison of C. albicans and S. cerevisiae starvation response in dependence of Gcn4p using 2D-PAGE is presented. Differences in the metabolism of both organisms are discussed.
-
(2004)
Proteomics
, vol.4
-
-
Yin, Z.1
Stead, D.2
Selway, L.3
Walker, J.4
Riba-Garcia, I.5
McLnerney, T.6
Gaskell, S.J.7
Oliver, S.G.8
Cash, P.9
Brown, A.J.P.10
-
11
-
-
0037347486
-
Drug induced proteome changes in Candida albicans: Comparison of the effect of beta(1,3) glucan synthase inhibitors and two triazoles, fluconazole and itraconazole
-
J.M. Bruneau, I. Maillet, E. Tagat, R. Legrand, F. Supatto, C. Fudali, J.P. Caer, V. Labas, D. Lecaque, and J. Hodgson Drug induced proteome changes in Candida albicans: comparison of the effect of beta(1,3) glucan synthase inhibitors and two triazoles, fluconazole and itraconazole Proteomics 3 2003 325 336 Clustering of quantitative protein expression profiles was used to distinguish between the mechanisms of azols and echinocandines. A target of echinocandines, Mlv1p was identified that could explain the reduced ergosterol levels in Candida treated with echinocandines.
-
(2003)
Proteomics
, vol.3
, pp. 325-336
-
-
Bruneau, J.M.1
Maillet, I.2
Tagat, E.3
Legrand, R.4
Supatto, F.5
Fudali, C.6
Caer, J.P.7
Labas, V.8
Lecaque9
Hodgson, J.D.10
-
12
-
-
0035824515
-
Proteome analysis and morphological studies reveal multiple effects of the immunosuppressive drug mycophenolic acid specifically resulting from guanylic nucleotide depletion
-
M. Escobar-Henriques, A. Balguerie, C. Monribot, H. Boucherie, and B. Daignan-Fornier Proteome analysis and morphological studies reveal multiple effects of the immunosuppressive drug mycophenolic acid specifically resulting from guanylic nucleotide depletion J Biol Chem 276 2001 46237 46242
-
(2001)
J Biol Chem
, vol.276
, pp. 46237-46242
-
-
Escobar-Henriques, M.1
Balguerie, A.2
Monribot, C.3
Boucherie4
Daignan-Fornier, B.H.5
-
13
-
-
0038631572
-
Sequential fractionation and two-dimensional gel analysis unravels the complexity of the dimorphic fungus Candida albicans cell wall proteome
-
A. Pitarch, M. Sanchez, C. Nombela, and C. Gil Sequential fractionation and two-dimensional gel analysis unravels the complexity of the dimorphic fungus Candida albicans cell wall proteome Mol Cell Proteomics 1 2002 967 982
-
(2002)
Mol Cell Proteomics
, vol.1
, pp. 967-982
-
-
Pitarch, A.1
Sanchez, M.2
Nombela3
Gil, C.C.4
-
14
-
-
0038018413
-
Identification of cell surface determinants in Candida albicans reveals Tsa1p, a protein differentially localized in the cell
-
C. Urban, K. Sohn, F. Lottspeich, H. Brunner, and S. Rupp Identification of cell surface determinants in Candida albicans reveals Tsa1p, a protein differentially localized in the cell FEBS Lett 544 2003 228 235 A method to selectively identify non-covalently linked cell surface proteins on yeast and hyphal cells was described in this study. Furthermore, differential localisation of Tsa1p to the hyphal cell surface was shown.
-
(2003)
FEBS Lett
, vol.544
, pp. 228-235
-
-
Urban, C.1
Sohn, K.2
Lottspeich, F.3
Brunner4
Rupp, S.H.5
-
15
-
-
4143087024
-
Proteomic analysis of Candida albicans cell walls reveals covalently bound carbohydrate-active enzymes and adhesins
-
in press
-
de Groot PWJ, de Boer AD, Cunningham J, Dekker HL, de Jong L, Hellingwerf KJ, de Koster C, Klis FM: Proteomic analysis of Candida albicans cell walls reveals covalently bound carbohydrate-active enzymes and adhesins. Eukaryotic Cell 2004, in press. For the first time this paper describes a general method to identify covalently linked cell wall proteins of C. albicans using simple chemical or enzymatic steps to liberate the cell wall proteins, followed by protease treatment and LC-MS/MS technologies.
-
Eukaryotic Cell 2004
-
-
De Groot, P.W.J.1
De Boer, A.D.2
Cunningham, J.3
Dekker, H.L.4
De Jong, L.5
Hellingwerf, K.J.6
De Koster, C.7
Klis, F.M.8
-
16
-
-
0038601809
-
Genome-wide identification of fungal GPI proteins
-
P.W. de Groot, K.J. Hellingwerf, and F.M. Klis Genome-wide identification of fungal GPI proteins Yeast 20 2003 781 796
-
(2003)
Yeast
, vol.20
, pp. 781-796
-
-
De Groot, P.W.1
Hellingwerf2
Klis, F.M.K.J.3
-
17
-
-
0036670881
-
Adhesion in Candida spp
-
P. Sundstrom Adhesion in Candida spp Cell Microbiol 4 2002 461 469
-
(2002)
Cell Microbiol
, vol.4
, pp. 461-469
-
-
Sundstrom, P.1
-
18
-
-
0345391036
-
Adhesive and mammalian transglutaminase substrate properties of Candida albicans Hwp1
-
J.F. Staab, S.D. Bradway, P.L. Fidel, and P. Sundstrom Adhesive and mammalian transglutaminase substrate properties of Candida albicans Hwp1 Science 283 1999 1535 1538
-
(1999)
Science
, vol.283
, pp. 1535-1538
-
-
Staab, J.F.1
Bradway, S.D.2
Fidel3
Sundstrom, P.P.L.4
-
19
-
-
0037344772
-
Candida albicans binds human plasminogen: Identification of eight plasminogen-binding proteins
-
J.D. Crowe, I.K. Sievwright, G.C. Auld, N.R. Moore, N.A. Gow, and N.A. Booth Candida albicans binds human plasminogen: identification of eight plasminogen-binding proteins Mol Microbiol 47 2003 1637 1651
-
(2003)
Mol Microbiol
, vol.47
, pp. 1637-1651
-
-
Crowe, J.D.1
Sievwright, I.K.2
Auld, G.C.3
Moore, N.R.4
Gow5
Booth, N.A.N.A.6
-
20
-
-
0043030106
-
Binding of Candida albicans enolase to plasmin(ogen) results in enhanced invasion of human brain microvascular endothelial cells
-
A.Y. Jong, S.H. Chen, M.F. Stins, K.S. Kim, T.L. Tuan, and S.H. Huang Binding of Candida albicans enolase to plasmin(ogen) results in enhanced invasion of human brain microvascular endothelial cells J Med Microbiol 52 2003 615 622
-
(2003)
J Med Microbiol
, vol.52
, pp. 615-622
-
-
Jong, A.Y.1
Chen, S.H.2
Stins, M.F.3
Kim, K.S.4
Tuan5
Huang, S.H.T.L.6
-
21
-
-
0042208078
-
Candida albicans Ssa1/2p is the cell envelope binding protein for human salivary histatin 5
-
X.S. Li, M.S. Reddy, D. Baev, and M. Edgerton Candida albicans Ssa1/2p is the cell envelope binding protein for human salivary histatin 5 J Biol Chem 278 2003 28553 28561
-
(2003)
J Biol Chem
, vol.278
, pp. 28553-28561
-
-
Li, X.S.1
Reddy, M.S.2
Baev3
Edgerton, M.D.4
-
22
-
-
0035320127
-
Analysis of the serologic response to systemic Candida albicans infection in a murine model
-
A. Pitarch, R. Diez-Orejas, G. Molero, M. Pardo, M. Sanchez, C. Gil, and C. Nombela Analysis of the serologic response to systemic Candida albicans infection in a murine model Proteomics 1 2001 550 559
-
(2001)
Proteomics
, vol.1
, pp. 550-559
-
-
Pitarch, A.1
Diez-Orejas, R.2
Molero, G.3
Pardo, M.4
Sanchez, M.5
Gil6
Nombela, C.C.7
-
23
-
-
19244372119
-
Contribution of the antibodies response induced by a low virulent Candida albicans strain in protection against systemic candidiasis
-
E. Fernández-Arenas, G. Molero, C. Nombela, R. Diez-Orejas, and C. Gil Contribution of the antibodies response induced by a low virulent Candida albicans strain in protection against systemic candidiasis Proteomics 4 2004 1204 1215 This study shows that an antisera generated from distinct C. albicans strains have different potential in protecting mice from lethal infections.
-
(2004)
Proteomics
, vol.4
, pp. 1204-1215
-
-
Fernández-Arenas, E.1
Molero, G.2
Nombela, C.3
Diez-Orejas4
Gil, C.R.5
-
24
-
-
0036784710
-
Interplay between protective and inhibitory antibodies dictates the outcome of experimentally disseminated Candidiasis in recipients of a Candida albicans vaccine
-
C. Bromuro, A. Torosantucci, P. Chiani, S. Conti, L. Polonelli, and A. Cassone Interplay between protective and inhibitory antibodies dictates the outcome of experimentally disseminated Candidiasis in recipients of a Candida albicans vaccine Infect Immun 70 2002 5462 5470 The authors show that an antisera incubated with C. albicans cells gain protective function, suggesting the presence of protective and non-protective or adverse antibodies.
-
(2002)
Infect Immun
, vol.70
, pp. 5462-5470
-
-
Bromuro, C.1
Torosantucci, A.2
Chiani, P.3
Conti, S.4
Polonelli5
Cassone, A.L.6
-
25
-
-
4143100791
-
Proteomics-based identification of novel Candida albicans antigens for diagnosis and clinical follow-up of systemic candidiasis in patients with underlying hematological malignancies
-
in press
-
Pitarch A, Abian J, Carrascal M, Sanchez M, Nombela C, Gil C: Proteomics-based identification of novel Candida albicans antigens for diagnosis and clinical follow-up of systemic candidiasis in patients with underlying hematological malignancies. Proteomics 2004, in press. The host response during systemic Candidiasis was directly monitored by immunoproteomics in four patients. Development of antibodies during infection was followed and differences between survivors and non-survivors were reported.
-
(2004)
Proteomics
-
-
Pitarch, A.1
Abian, J.2
Carrascal, M.3
Sanchez, M.4
Nombela, C.5
Gil, C.6
-
26
-
-
0038797822
-
Identification of Candida albicans genes induced during thrush offers insight into pathogenesis
-
S. Cheng, C.J. Clancy, M.A. Checkley, M. Handfield, J.D. Hillman, A. Progulske-Fox, A.S. Lewin, P.L. Fidel, and M.H. Nguyen Identification of Candida albicans genes induced during thrush offers insight into pathogenesis Mol Microbiol 48 2003 1275 1288 In vivo induced antigen technology was used to identify proteins only expressed during infection of AIDS patients. Ten proteins were identified among them known virulence factors like Hwp1p or Cts20p. In addition, a novel protein Not5p that contributes to virulence in mouse models was identified and characterised.
-
(2003)
Mol Microbiol
, vol.48
, pp. 1275-1288
-
-
Cheng, S.1
Clancy, C.J.2
Checkley, M.A.3
Handfield, M.4
Hillman, J.D.5
Progulske-Fox, A.6
Lewin, A.S.7
Fidel8
Nguyen, M.H.P.L.9
-
27
-
-
1242284157
-
Proteomic and gene profiling approaches to study host responses to bacterial infection
-
A. Walduck, T. Rudel, and T.F. Meyer Proteomic and gene profiling approaches to study host responses to bacterial infection Curr Opin Microbiol 7 2004 33 38
-
(2004)
Curr Opin Microbiol
, vol.7
, pp. 33-38
-
-
Walduck, A.1
Rudel2
Meyer, T.F.T.3
-
28
-
-
0037015610
-
Analysis of the Plasmodium falciparum proteome by high-accuracy mass spectrometry
-
E. Lasonder, Y. Ishihama, J.S. Andersen, A.M. Vermunt, A. Pain, R.W. Sauerwein, W.M. Eling, N. Hall, A.P. Waters, and H.G. Stunnenberg Analysis of the Plasmodium falciparum proteome by high-accuracy mass spectrometry Nature 419 2002 537 542
-
(2002)
Nature
, vol.419
, pp. 537-542
-
-
Lasonder, E.1
Ishihama, Y.2
Andersen, J.S.3
Vermunt, A.M.4
Pain, A.5
Sauerwein, R.W.6
Eling, W.M.7
Hall, N.8
Waters9
Stunnenberg, H.G.A.P.10
-
29
-
-
0037050004
-
Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry
-
Y. Ho, A. Gruhler, A. Heilbut, G.D. Bader, L. Moore, S.L. Adams, A. Millar, P. Taylor, K. Bennett, and K. Boutilier Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry Nature 415 2002 180 183
-
(2002)
Nature
, vol.415
, pp. 180-183
-
-
Ho, Y.1
Gruhler, A.2
Heilbut, A.3
Bader, G.D.4
Moore, L.5
Adams, S.L.6
Millar, A.7
Taylor, P.8
Bennett9
Boutilier, K.K.10
-
30
-
-
0037050026
-
Functional organization of the yeast proteome by systematic analysis of protein complexes
-
A.C. Gavin, M. Bosche, R. Krause, P. Grandi, M. Marzioch, A. Bauer, J. Schultz, J.M. Rick, A.M. Michon, and C.M. Cruciat Functional organization of the yeast proteome by systematic analysis of protein complexes Nature 415 2002 141 147
-
(2002)
Nature
, vol.415
, pp. 141-147
-
-
Gavin, A.C.1
Bosche, M.2
Krause, R.3
Grandi, P.4
Marzioch, M.5
Bauer, A.6
Schultz, J.7
Rick, J.M.8
Michon9
Cruciat, C.M.A.M.10
-
31
-
-
0035860499
-
Global analysis of protein activities using proteome chips
-
H. Zhu, M. Bilgin, R. Bangham, D. Hall, A. Casamayor, P. Bertone, N. Lan, R. Jansen, S. Bidlingmaier, and T. Houfek Global analysis of protein activities using proteome chips Science 293 2001 2101 2105
-
(2001)
Science
, vol.293
, pp. 2101-2105
-
-
Zhu, H.1
Bilgin, M.2
Bangham, R.3
Hall, D.4
Casamayor, A.5
Bertone, P.6
Lan, N.7
Jansen, R.8
Bidlingmaier9
Houfek, T.S.10
-
32
-
-
4143070801
-
Assessing protein patterns in disease using imaging mass spectrometry
-
P. Chaurand, S.A. Schwartz, and R.M. Caprioli Assessing protein patterns in disease using imaging mass spectrometry J Proteome Res 3 2004 245 252
-
(2004)
J Proteome Res
, vol.3
, pp. 245-252
-
-
Chaurand, P.1
Schwartz2
Caprioli, R.M.S.A.3
|