-
1
-
-
0035546157
-
Gene expression and molecular evolution
-
Akashi, H. 2001. Gene expression and molecular evolution. Curr. Opin. Genet. Devel. 11:660-666.
-
(2001)
Curr. Opin. Genet. Devel.
, vol.11
, pp. 660-666
-
-
Akashi, H.1
-
2
-
-
0041817645
-
Translational selection and yeast proteome evolution
-
-. 2003. Translational selection and yeast proteome evolution. Genetics 164:1291-1303.
-
(2003)
Genetics
, vol.164
, pp. 1291-1303
-
-
-
3
-
-
0037108764
-
Linkage limits the power of natural selection in Drosophila
-
Bettancourt, A. J., and Presgraves, D. C. 2002. Linkage limits the power of natural selection in Drosophila. Proc. Natl. Acad. Sci. USA 99:13616-13620.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 13616-13620
-
-
Bettancourt, A.J.1
Presgraves, D.C.2
-
4
-
-
0034130561
-
Gene expression analysis by massively parallel signature sequencing (MPSS) on microbead arrays
-
Brenner, S., M. Johnson, J. Bridgham, et al. (21 co-authors). 2000. Gene expression analysis by massively parallel signature sequencing (MPSS) on microbead arrays. Nat. Biotechnol. 18:630-634.
-
(2000)
Nat. Biotechnol.
, vol.18
, pp. 630-634
-
-
Brenner, S.1
Johnson, M.2
Bridgham, J.3
-
5
-
-
0034765913
-
The relationship between third-codon position nucleotide content, codon bias, mRNA secondary structure and gene expression in the drosophilid alcohol dehydrogenase genes Adh and Adhr
-
Carlini, D. B., Y. Chen, and W. Stephan. 2001. The relationship between third-codon position nucleotide content, codon bias, mRNA secondary structure and gene expression in the drosophilid alcohol dehydrogenase genes Adh and Adhr. Genetics 159:623-633.
-
(2001)
Genetics
, vol.159
, pp. 623-633
-
-
Carlini, D.B.1
Chen, Y.2
Stephan, W.3
-
6
-
-
0344653653
-
Codon usage and gene function are related in sequences of Arabidopsis thaliana
-
Chiapello, H., F. Lisacek, M. Caboche, and A. Henaut. 1998. Codon usage and gene function are related in sequences of Arabidopsis thaliana. Gene 209:GC1-GC38.
-
(1998)
Gene
, vol.209
-
-
Chiapello, H.1
Lisacek, F.2
Caboche, M.3
Henaut, A.4
-
7
-
-
0034237669
-
tRNA gene number and codon usage in the C. elegans genome are co-adapted for optimal translation of highly expressed genes
-
Duret, L. 2000. tRNA gene number and codon usage in the C. elegans genome are co-adapted for optimal translation of highly expressed genes. Trends Genet. 16:287-289.
-
(2000)
Trends Genet.
, vol.16
, pp. 287-289
-
-
Duret, L.1
-
8
-
-
0033551151
-
Expression pattern and, surprisingly, gene length shape codon usage in Caenorhabditis, Drosophila, and Arabidopsis
-
Duret, L., and D. Mouchiroud. 1999. Expression pattern and, surprisingly, gene length shape codon usage in Caenorhabditis, Drosophila, and Arabidopsis. Proc. Natl. Acad. Sci. USA 96:4482-4487.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 4482-4487
-
-
Duret, L.1
Mouchiroud, D.2
-
9
-
-
0033977618
-
Determinants of substitution rates in mammalian genes: Expression pattern affects selection intensity but not mutation rate
-
-. 2000. Determinants of substitution rates in mammalian genes: expression pattern affects selection intensity but not mutation rate. Mol. Biol. Evol. 17:68-74.
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 68-74
-
-
-
10
-
-
0029888297
-
Strong evolutionary conservation of broadly expressed protein isoforms in the troponin I gene family and other vertebrate gene families
-
Hastings, K. E. 1996. Strong evolutionary conservation of broadly expressed protein isoforms in the troponin I gene family and other vertebrate gene families. J. Mol. Evol. 42: 631-640.
-
(1996)
J. Mol. Evol.
, vol.42
, pp. 631-640
-
-
Hastings, K.E.1
-
11
-
-
0034736528
-
A test of translational selection at 'silent' sites in the human genome: Base composition comparisons in alternatively spliced genes
-
Iida, K., and H. Akashi. 2000. A test of translational selection at 'silent' sites in the human genome: base composition comparisons in alternatively spliced genes. Gene 261:93-105.
-
(2000)
Gene
, vol.261
, pp. 93-105
-
-
Iida, K.1
Akashi, H.2
-
12
-
-
0021958933
-
Codon usage and tRNA content in unicellular and multicellular organisms
-
Ikemura, T., 1985. Codon usage and tRNA content in unicellular and multicellular organisms. Mol. Biol. Evol. 2:13-34.
-
(1985)
Mol. Biol. Evol.
, vol.2
, pp. 13-34
-
-
Ikemura, T.1
-
13
-
-
0034821884
-
Codon usage and tRNA genes in eukaryotes: Correlation of codon usage diversity with translation efficiency and with CG-dinucleotide usage as assessed by multivariate analysis
-
Kanaya, S., Y. Yamada, M. Kinouchi, Y. Kudo, and T. Ikemura. 2001. Codon usage and tRNA genes in eukaryotes: correlation of codon usage diversity with translation efficiency and with CG-dinucleotide usage as assessed by multivariate analysis. J. Mol. Evol. 53:290-298.
-
(2001)
J. Mol. Evol.
, vol.53
, pp. 290-298
-
-
Kanaya, S.1
Yamada, Y.2
Kinouchi, M.3
Kudo, Y.4
Ikemura, T.5
-
14
-
-
0028832984
-
Functional constraints against variations on molecules from the tissue level: Slowly evolving brain-specific genes demonstrated by protein kinase and immunoglobulin supergene families
-
Kuma, K., N. Iwabe, and T. Miyata. 1995. Functional constraints against variations on molecules from the tissue level: slowly evolving brain-specific genes demonstrated by protein kinase and immunoglobulin supergene families. Mol. Biol. Evol. 12:123-130.
-
(1995)
Mol. Biol. Evol.
, vol.12
, pp. 123-130
-
-
Kuma, K.1
Iwabe, N.2
Miyata, T.3
-
15
-
-
4143105022
-
Recombination and base composition: The case of the highly self-fertilizing plant Arabidopsis thaliana
-
Marais, G., Charlesworth, B., and S. I. Wright. 2004. Recombination and base composition: the case of the highly self-fertilizing plant Arabidopsis thaliana. Genome Biol. 5:R45.
-
(2004)
Genome Biol.
, vol.5
-
-
Marais, G.1
Charlesworth, B.2
Wright, S.I.3
-
16
-
-
0035157374
-
Inferring parameters of mutation, selection and demography from patterns of synonymous site evolution in Drosophila
-
McVean, G. A., and J. Vieira. 2001. Inferring parameters of mutation, selection and demography from patterns of synonymous site evolution in Drosophila. Genetics 157: 245-257.
-
(2001)
Genetics
, vol.157
, pp. 245-257
-
-
McVean, G.A.1
Vieira, J.2
-
17
-
-
3042581437
-
Arabidopsis MPSS. An online resource for quantitative expression analysis
-
Meyers, B. C., D. K. Lee, T. H. Vu, S. S. Tej, S. B. Edberg, M. Matvienko, and L. D. Tindell. 2004. Arabidopsis MPSS. An online resource for quantitative expression analysis. Plant Physiol. 135:801-813.
-
(2004)
Plant Physiol.
, vol.135
, pp. 801-813
-
-
Meyers, B.C.1
Lee, D.K.2
Vu, T.H.3
Tej, S.S.4
Edberg, S.B.5
Matvienko, M.6
Tindell, L.D.7
-
18
-
-
0030731696
-
Codon usage bias and tRNA abundance in Drosophila
-
Moriyama, E. N., and J. R. Powell. 1997. Codon usage bias and tRNA abundance in Drosophila. J. Mol. Evol. 45:514-523.
-
(1997)
J. Mol. Evol.
, vol.45
, pp. 514-523
-
-
Moriyama, E.N.1
Powell, J.R.2
-
19
-
-
0036667702
-
Accounting for background nucleotide composition when measuring codon usage bias
-
Novembre, J. A. 2002. Accounting for background nucleotide composition when measuring codon usage bias. Mol. Biol. Evol. 19:1390-1394.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 1390-1394
-
-
Novembre, J.A.1
-
20
-
-
0034978556
-
Highly expressed genes in yeast evolve slowly
-
Pal, C., B. Papp, and L. D. Hurst. 2001. Highly expressed genes in yeast evolve slowly. Genetics 158:927-931.
-
(2001)
Genetics
, vol.158
, pp. 927-931
-
-
Pal, C.1
Papp, B.2
Hurst, L.D.3
-
21
-
-
0035282838
-
Restricted wobble rules for eukaryotic genomes
-
Percudani, R. 2001. Restricted wobble rules for eukaryotic genomes. Trends Genet. 17:133-135.
-
(2001)
Trends Genet.
, vol.17
, pp. 133-135
-
-
Percudani, R.1
-
22
-
-
0032972599
-
DnaSP version 3: An integrated program for molecular population genetics and molecular evolution analysis
-
Rozas, J., and R. Rozas. 1999. DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics 15:174-175.
-
(1999)
Bioinformatics
, vol.15
, pp. 174-175
-
-
Rozas, J.1
Rozas, R.2
-
23
-
-
0028359705
-
Codon usage in Caenorhabditis elegans: Delineation of translational selection and mutational biases
-
Stenico, M., A. T. Lloyd, and P. M. Sharp. 1994. Codon usage in Caenorhabditis elegans: delineation of translational selection and mutational biases. Nucleic Acids Res. 22:2437-2446.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 2437-2446
-
-
Stenico, M.1
Lloyd, A.T.2
Sharp, P.M.3
-
24
-
-
4143096275
-
The transfer RNA genes in Oryza sativa L. ssp. indica
-
Wang, X., X. Shi, and B. Hao. 2002. The transfer RNA genes in Oryza sativa L. ssp. indica. Sci. China (Ser. C) 45:504-511.
-
(2002)
Sci. China (Ser. C)
, vol.45
, pp. 504-511
-
-
Wang, X.1
Shi, X.2
Hao, B.3
-
25
-
-
0036729901
-
Rates and patterns of molecular evolution in inbred and outbred Arabidopsis
-
Wright, S. I., B. Lauga, and D. Charlesworth. 2002. Rates and patterns of molecular evolution in inbred and outbred Arabidopsis. Mol. Biol. Evol. 19:1399-1406.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 1399-1406
-
-
Wright, S.I.1
Lauga, B.2
Charlesworth, D.3
-
26
-
-
0036726239
-
Patterns of nucleotide substitution among simultaneously duplicated gene pairs in Arabidopsis thaliana
-
Zhang, L., T. J. Vision, and B. S. Gaut. 2002. Patterns of nucleotide substitution among simultaneously duplicated gene pairs in Arabidopsis thaliana. Mol. Biol. Evol. 19:1464-1473.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 1464-1473
-
-
Zhang, L.1
Vision, T.J.2
Gaut, B.S.3
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