-
1
-
-
0034996988
-
Genotypes of JC virus in East, Central and Southwest Europe
-
Agostini, H. T., A. Deckhut, D. V. Jobes, R. Girones, G. Schlunck, M. G. Prost, C. Frias, E. Pérez-Trallero, C. F. Ryschkewitsch, and G. L. Stoner. 2001. Genotypes of JC virus in East, Central and Southwest Europe. J. Gen. Virol. 82:1221-1231.
-
(2001)
J. Gen. Virol.
, vol.82
, pp. 1221-1231
-
-
Agostini, H.T.1
Deckhut, A.2
Jobes, D.V.3
Girones, R.4
Schlunck, G.5
Prost, M.G.6
Frias, C.7
Pérez-Trallero, E.8
Ryschkewitsch, C.F.9
Stoner, G.L.10
-
2
-
-
0001387226
-
Molecular evolution and epidemiology of JC virus
-
K. Khalili and G. L. Stoner (ed.). Wiley-Liss, Inc., New York, N.Y.
-
Agostini, H. T., D. V. Jobes, and G. L. Stoner. 2001. Molecular evolution and epidemiology of JC virus, p. 491-526. In K. Khalili and G. L. Stoner (ed.), Human polyomaviruses: molecular and clinical perspectives. Wiley-Liss, Inc., New York, N.Y.
-
(2001)
Human Polyomaviruses: Molecular and Clinical Perspectives
, pp. 491-526
-
-
Agostini, H.T.1
Jobes, D.V.2
Stoner, G.L.3
-
3
-
-
0031049177
-
JC virus regulatory region rearrangements and genotypes in progressive multifocal leukoencephalopathy: Two independent aspects of virus variation
-
Agostini, H. T., C. F. Ryschkewitsch, E. J. Singer, and G. L. Stoner. 1997. JC virus regulatory region rearrangements and genotypes in progressive multifocal leukoencephalopathy: two independent aspects of virus variation. J. Gen. Virol. 78:659-664.
-
(1997)
J. Gen. Virol.
, vol.78
, pp. 659-664
-
-
Agostini, H.T.1
Ryschkewitsch, C.F.2
Singer, E.J.3
Stoner, G.L.4
-
4
-
-
0012588923
-
SV40 and human tumors
-
K. Khalili and G. L. Stoner (ed.). John Wiley & Sons, New York, N.Y.
-
Arrington, A. S., and J. S. Butel. 2001. SV40 and human tumors, p. 461-489. In K. Khalili and G. L. Stoner (ed.), Human polyomaviruses: molecular and clinical perspectives. John Wiley & Sons, New York, N.Y.
-
(2001)
Human Polyomaviruses: Molecular and Clinical Perspectives
, pp. 461-489
-
-
Arrington, A.S.1
Butel, J.S.2
-
5
-
-
1842538760
-
SV40-positive brain tumor in scientist with risk of laboratory exposure to the virus
-
Arrington, A. S., M. S. Moore, and J. S. Butel. 2004. SV40-positive brain tumor in scientist with risk of laboratory exposure to the virus. Oncogene 23:2231-2235.
-
(2004)
Oncogene
, vol.23
, pp. 2231-2235
-
-
Arrington, A.S.1
Moore, M.S.2
Butel, J.S.3
-
6
-
-
0010470931
-
Annotated nucleotide sequence and restriction site lists for selected papovavirus strains
-
N. P. Salzman (ed.). Plenum Press, New York, N.Y.
-
Buckler, C. E., and N. P. Salzman. 1986. Annotated nucleotide sequence and restriction site lists for selected papovavirus strains, p. 379-447. In N. P. Salzman (ed.), The Papovaviridae, vol. 1. The polyomaviruses. Plenum Press, New York, N.Y.
-
(1986)
The Papovaviridae, Vol. 1. The Polyomaviruses
, vol.1
, pp. 379-447
-
-
Buckler, C.E.1
Salzman, N.P.2
-
7
-
-
0035663146
-
Increasing evidence for involvement of SV40 in human cancer
-
Butel, J. S. 2001. Increasing evidence for involvement of SV40 in human cancer. Dis. Markers 17:167-172.
-
(2001)
Dis. Markers
, vol.17
, pp. 167-172
-
-
Butel, J.S.1
-
8
-
-
0003002776
-
Optimal algorithms for comparing trees with labeled leaves
-
Day, W. H. E. 1985. Optimal algorithms for comparing trees with labeled leaves. J. Classification 2:7-28.
-
(1985)
J. Classification
, vol.2
, pp. 7-28
-
-
Day, W.H.E.1
-
9
-
-
84962997608
-
Analysis of quartet dissimilarity measures between undirected phylogenetic trees
-
Day, W. H. E. 1986. Analysis of quartet dissimilarity measures between undirected phylogenetic trees. Syst. Zool. 35:325-333.
-
(1986)
Syst. Zool.
, vol.35
, pp. 325-333
-
-
Day, W.H.E.1
-
10
-
-
0013901284
-
Loss of transplantation antigen in primary simian virus 40-induced tumors and their metastases
-
Deichman, G. I., and T. E. Kluchareva. 1966. Loss of transplantation antigen in primary simian virus 40-induced tumors and their metastases. J. Natl. Cancer Inst. 36:647-655.
-
(1966)
J. Natl. Cancer Inst.
, vol.36
, pp. 647-655
-
-
Deichman, G.I.1
Kluchareva, T.E.2
-
11
-
-
0023823442
-
Molecular phylogeny of the animal kingdom
-
Field, K. G., G. J. Olsen, D. J. Lane, S. J. Giovannoni, M. T. Ghiselin, E. C. Raff, N. R. Pace, and R. A. Raff. 1988. Molecular phylogeny of the animal kingdom. Science 239:748-753.
-
(1988)
Science
, vol.239
, pp. 748-753
-
-
Field, K.G.1
Olsen, G.J.2
Lane, D.J.3
Giovannoni, S.J.4
Ghiselin, M.T.5
Raff, E.C.6
Pace, N.R.7
Raff, R.A.8
-
12
-
-
4143110753
-
An infectious deoxyribonucleic acid derived from vacuolating virus (SV40)
-
Gerber, P. 1962. An infectious deoxyribonucleic acid derived from vacuolating virus (SV40). Virology 16:96-97.
-
(1962)
Virology
, vol.16
, pp. 96-97
-
-
Gerber, P.1
-
13
-
-
0013794457
-
Prevention of SV40 virus oncogenesis in hamsters. I. Tumor resistance induced by human cells transformed by SV40
-
Girardi, A. J. 1965. Prevention of SV40 virus oncogenesis in hamsters. I. Tumor resistance induced by human cells transformed by SV40. Proc. Natl. Acad. Sci. USA 54:445-451.
-
(1965)
Proc. Natl. Acad. Sci. USA
, vol.54
, pp. 445-451
-
-
Girardi, A.J.1
-
14
-
-
0001483634
-
Development of tumors in hamsters inoculated in the neonatal period with vacuolating virus, SV40
-
Girardi, A. J., B. H. Sweet, V. B. Slotnick, and M. R. Hilleman. 1962. Development of tumors in hamsters inoculated in the neonatal period with vacuolating virus, SV40. Proc. Soc. Exp. Biol. Med. 109:649-660.
-
(1962)
Proc. Soc. Exp. Biol. Med.
, vol.109
, pp. 649-660
-
-
Girardi, A.J.1
Sweet, B.H.2
Slotnick, V.B.3
Hilleman, M.R.4
-
15
-
-
0014202537
-
Selective extraction of polyoma DNA from infected mouse cell cultures
-
Hirt, B. 1967. Selective extraction of polyoma DNA from infected mouse cell cultures. J. Mol. Biol. 26:365-369.
-
(1967)
J. Mol. Biol.
, vol.26
, pp. 365-369
-
-
Hirt, B.1
-
16
-
-
84919219135
-
The vacuolating virus of monkeys. I. Isolation, growth characteristics, and inclusion body formation
-
Hsiung, G. D., and W. H. Gaylord, Jr. 1961. The vacuolating virus of monkeys. I. Isolation, growth characteristics, and inclusion body formation. J. Exp. Med. 114:975-986.
-
(1961)
J. Exp. Med.
, vol.114
, pp. 975-986
-
-
Hsiung, G.D.1
Gaylord Jr., W.H.2
-
17
-
-
0033619109
-
Maintenance of episomal SV40 genomes in GM637 human fibroblasts
-
Huang, K. C., E. F. Yamasaki, and R. M. Snapka. 1999. Maintenance of episomal SV40 genomes in GM637 human fibroblasts. Virology 262:457-469.
-
(1999)
Virology
, vol.262
, pp. 457-469
-
-
Huang, K.C.1
Yamasaki, E.F.2
Snapka, R.M.3
-
18
-
-
0026673906
-
Genetic analysis of simian virus 40 from brains and kidneys of macaque monkeys
-
Ilyinskii, P. O., M. D. Daniel, C. J. Horvath, and R. C. Desrosiers. 1992. Genetic analysis of simian virus 40 from brains and kidneys of macaque monkeys. J. Virol. 66:6353-6360.
-
(1992)
J. Virol.
, vol.66
, pp. 6353-6360
-
-
Ilyinskii, P.O.1
Daniel, M.D.2
Horvath, C.J.3
Desrosiers, R.C.4
-
19
-
-
0031713459
-
Phylogenetic analysis of 22 complete genomes of the human polyomavirus JC virus
-
Jobes, D. V., S. C. Chima, C. F. Ryschkewitsch, and G. L. Stoner. 1998. Phylogenetic analysis of 22 complete genomes of the human polyomavirus JC virus. J. Gen. Virol. 79:2491-2498.
-
(1998)
J. Gen. Virol.
, vol.79
, pp. 2491-2498
-
-
Jobes, D.V.1
Chima, S.C.2
Ryschkewitsch, C.F.3
Stoner, G.L.4
-
20
-
-
0019296687
-
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
-
Kimura, M. 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16:111-120.
-
(1980)
J. Mol. Evol.
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
21
-
-
0021702065
-
Cloning of SV40 genomes from human brain tumors
-
Krieg, P., and G. Scherer. 1984. Cloning of SV40 genomes from human brain tumors. Virology 138:336-340.
-
(1984)
Virology
, vol.138
, pp. 336-340
-
-
Krieg, P.1
Scherer, G.2
-
22
-
-
0026701984
-
Two synthetic Sp1-binding sites functionally substitute for the 21-base-pair repeat region to activate simian virus 40 growth in CV-1 cells
-
Lednicky, J., and W. R. Folk. 1992. Two synthetic Sp1-binding sites functionally substitute for the 21-base-pair repeat region to activate simian virus 40 growth in CV-1 cells. J. Virol. 66:6379-6390.
-
(1992)
J. Virol.
, vol.66
, pp. 6379-6390
-
-
Lednicky, J.1
Folk, W.R.2
-
23
-
-
0031969426
-
Natural isolates of simian virus 40 from immunocompromised monkeys display extensive genetic heterogeneity: New implications for polyomavirus disease
-
Lednicky, J. A., A. S. Arrington, A. R. Stewart, X. M. Dai, C. Wong, S. Jafar, M. Murphey-Corb, and J. S. Butel. 1998. Natural isolates of simian virus 40 from immunocompromised monkeys display extensive genetic heterogeneity: new implications for polyomavirus disease. J. Virol. 72:3980-3990.
-
(1998)
J. Virol.
, vol.72
, pp. 3980-3990
-
-
Lednicky, J.A.1
Arrington, A.S.2
Stewart, A.R.3
Dai, X.M.4
Wong, C.5
Jafar, S.6
Murphey-Corb, M.7
Butel, J.S.8
-
24
-
-
0030743738
-
Tissue culture adaptation of natural isolates of simian virus 40: Changes occur in viral regulatory region but not in carboxy-terminal domain of large T-antigen
-
Lednicky, J. A., and J. S. Butel. 1997. Tissue culture adaptation of natural isolates of simian virus 40: changes occur in viral regulatory region but not in carboxy-terminal domain of large T-antigen. J. Gen. Virol. 78:1697-1705.
-
(1997)
J. Gen. Virol.
, vol.78
, pp. 1697-1705
-
-
Lednicky, J.A.1
Butel, J.S.2
-
25
-
-
0035106012
-
Simian virus 40 regulatory region structural diversity and the association of viral archetypal regulatory regions with human brain tumors
-
Lednicky, J. A., and J. S. Butel. 2001. Simian virus 40 regulatory region structural diversity and the association of viral archetypal regulatory regions with human brain tumors. Semin. Cancer Biol. 11:39-47.
-
(2001)
Semin. Cancer Biol.
, vol.11
, pp. 39-47
-
-
Lednicky, J.A.1
Butel, J.S.2
-
26
-
-
0028971951
-
Natural simian virus 40 strains are present in human choroid plexus and ependymoma tumors
-
Lednicky, J. A., R. L. Garcea, D. J. Bergsagel, and J. S. Butel. 1995. Natural simian virus 40 strains are present in human choroid plexus and ependymoma tumors. Virology 212:710-717.
-
(1995)
Virology
, vol.212
, pp. 710-717
-
-
Lednicky, J.A.1
Garcea, R.L.2
Bergsagel, D.J.3
Butel, J.S.4
-
27
-
-
0030761558
-
SV40 DNA in human osteosarcomas shows sequence variation among T-antigen genes
-
Lednicky, J. A., A. R. Stewart, J. J. Jenkins III, M. J. Finegold, and J. S. Butel. 1997. SV40 DNA in human osteosarcomas shows sequence variation among T-antigen genes. Int. J. Cancer 72:791-800.
-
(1997)
Int. J. Cancer
, vol.72
, pp. 791-800
-
-
Lednicky, J.A.1
Stewart, A.R.2
Jenkins III, J.J.3
Finegold, M.J.4
Butel, J.S.5
-
28
-
-
0028817646
-
Artificial modification of the viral regulatory region improves tissue culture growth of SV40 strain 776
-
Lednicky, J. A., C. Wong, and J. S. Butel. 1995. Artificial modification of the viral regulatory region improves tissue culture growth of SV40 strain 776. Virus Res. 35:143-153.
-
(1995)
Virus Res.
, vol.35
, pp. 143-153
-
-
Lednicky, J.A.1
Wong, C.2
Butel, J.S.3
-
29
-
-
0024460209
-
Regulatory sequences of SV40 variants isolated from patients with progressive multifocal leukoencephalopathy
-
Martin, J. D. 1989. Regulatory sequences of SV40 variants isolated from patients with progressive multifocal leukoencephalopathy. Virus Res. 14:85-94.
-
(1989)
Virus Res.
, vol.14
, pp. 85-94
-
-
Martin, J.D.1
-
30
-
-
0000145173
-
Excretion of vacuolating SV-40 virus (papova virus group) after ingestion as a contaminant of oral poliovaccine
-
Melnick, J. L., and S. Stinebaugh. 1962. Excretion of vacuolating SV-40 virus (papova virus group) after ingestion as a contaminant of oral poliovaccine. Proc. Soc. Exp. Biol. Med. 109:965-968.
-
(1962)
Proc. Soc. Exp. Biol. Med.
, vol.109
, pp. 965-968
-
-
Melnick, J.L.1
Stinebaugh, S.2
-
31
-
-
0031857765
-
Identification of SV40 in brain, kidney and urine of healthy and SIV-infected rhesus monkeys
-
Newman, J. S., G. B. Baskin, and R. J. Frisque. 1998. Identification of SV40 in brain, kidney and urine of healthy and SIV-infected rhesus monkeys. J. Neurovirol. 4:394-406.
-
(1998)
J. Neurovirol.
, vol.4
, pp. 394-406
-
-
Newman, J.S.1
Baskin, G.B.2
Frisque, R.J.3
-
32
-
-
0038205525
-
The archetype enhancer of simian virus 40 DNA is duplicated during virus growth in human cells and rhesus monkey kidney cells but not in green monkey kidney cells
-
O'Neill, F. J., J. E. Greenlee, and H. Carney. 2003. The archetype enhancer of simian virus 40 DNA is duplicated during virus growth in human cells and rhesus monkey kidney cells but not in green monkey kidney cells. Virology 310:173-182.
-
(2003)
Virology
, vol.310
, pp. 173-182
-
-
O'Neill, F.J.1
Greenlee, J.E.2
Carney, H.3
-
33
-
-
0002393841
-
The use of tree comparison metrics
-
Penny, D., and M. D. Hendy. 1985. The use of tree comparison metrics. Syst. Zool. 34:75-82.
-
(1985)
Syst. Zool.
, vol.34
, pp. 75-82
-
-
Penny, D.1
Hendy, M.D.2
-
34
-
-
0033572586
-
Unique strains of SV40 in commercial poliovaccines from 1955 not readily identifiable with current testing for SV40 infection
-
Rizzo, P., I. Di Resta, A. Powers, H. Ratner, and M. Carbone. 1999. Unique strains of SV40 in commercial poliovaccines from 1955 not readily identifiable with current testing for SV40 infection. Cancer Res. 59:6103-6108.
-
(1999)
Cancer Res.
, vol.59
, pp. 6103-6108
-
-
Rizzo, P.1
Di Resta, I.2
Powers, A.3
Ratner, H.4
Carbone, M.5
-
35
-
-
0026092377
-
Recurring theme of changes in the transcriptional control region of BK virus during adaptation to cell culture
-
Rubinstein, R., B. C. Schoonakker, and E. H. Barley. 1991. Recurring theme of changes in the transcriptional control region of BK virus during adaptation to cell culture. J. Virol. 65:1600-1604.
-
(1991)
J. Virol.
, vol.65
, pp. 1600-1604
-
-
Rubinstein, R.1
Schoonakker, B.C.2
Barley, E.H.3
-
36
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou, N., and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
-
(1987)
Mol. Biol. Evol.
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
37
-
-
0032814702
-
Examination of poliovirus vaccine preparations for SV40 sequences
-
Sangar, D., P. A. Pipkin, D. J. Wood, and P. D. Minor. 1999. Examination of poliovirus vaccine preparations for SV40 sequences. Biologicals 27:1-10.
-
(1999)
Biologicals
, vol.27
, pp. 1-10
-
-
Sangar, D.1
Pipkin, P.A.2
Wood, D.J.3
Minor, P.D.4
-
38
-
-
0032915955
-
Association of simian virus 40 with a central nervous system lesion distinct from progressive multifocal leukoencephalopathy in macaques with AIDS
-
Simon, M. A., P. O. Ilyinskii, G. B. Baskin, H. Y. Knight, D. R. Pauley, and A. A. Lackner. 1999. Association of simian virus 40 with a central nervous system lesion distinct from progressive multifocal leukoencephalopathy in macaques with AIDS. Am. J. Pathol. 154:437-446.
-
(1999)
Am. J. Pathol.
, vol.154
, pp. 437-446
-
-
Simon, M.A.1
Ilyinskii, P.O.2
Baskin, G.B.3
Knight, H.Y.4
Pauley, D.R.5
Lackner, A.A.6
-
39
-
-
0030586020
-
Identification of a variable region at the carboxy terminus of SV40 large T-antigen
-
Stewart, A. R., J. A. Lednicky, U. S. Benzick, M. J. Tevethia, and J. S. Butel. 1996. Identification of a variable region at the carboxy terminus of SV40 large T-antigen. Virology 221:355-361.
-
(1996)
Virology
, vol.221
, pp. 355-361
-
-
Stewart, A.R.1
Lednicky, J.A.2
Benzick, U.S.3
Tevethia, M.J.4
Butel, J.S.5
-
40
-
-
0031971856
-
Sequence analyses of human tumor-associated SV40 DNAs and SV40 viral isolates from monkeys and humans
-
Stewart, A. R., J. A. Lednicky, and J. S. Butel. 1998. Sequence analyses of human tumor-associated SV40 DNAs and SV40 viral isolates from monkeys and humans. J. Neurovirol. 4:182-193.
-
(1998)
J. Neurovirol.
, vol.4
, pp. 182-193
-
-
Stewart, A.R.1
Lednicky, J.A.2
Butel, J.S.3
-
43
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
44
-
-
0041318840
-
SV40 in human brain cancers and non-Hodgkin's lymphoma
-
Vilchez, R. A., and J. S. Butel. 2003. SV40 in human brain cancers and non-Hodgkin's lymphoma. Oncogene 22:5164-5172.
-
(2003)
Oncogene
, vol.22
, pp. 5164-5172
-
-
Vilchez, R.A.1
Butel, J.S.2
-
45
-
-
0036471492
-
Detection of polyomavirus simian virus 40 tumor antigen DNA in AIDS-related systemic non-Hodgkin lymphoma
-
Vilchez, R. A., J. A. Lednicky, S. J. Halvorson, Z. S. White, C. A. Kozinetz, and J. S. Butel. 2002. Detection of polyomavirus simian virus 40 tumor antigen DNA in AIDS-related systemic non-Hodgkin lymphoma. J. Acquir. Immune Defic. Syndr. 29:109-116.
-
(2002)
J. Acquir. Immune Defic. Syndr.
, vol.29
, pp. 109-116
-
-
Vilchez, R.A.1
Lednicky, J.A.2
Halvorson, S.J.3
White, Z.S.4
Kozinetz, C.A.5
Butel, J.S.6
-
46
-
-
0037045860
-
Association between simian virus 40 and non-Hodgkin lymphoma
-
Vilchez, R. A., C. R. Madden, C. A. Kozinetz, S. J. Halvorson, Z. S. White, J. L. Jorgensen, C. J. Finch, and J. S. Butel. 2002. Association between simian virus 40 and non-Hodgkin lymphoma. Lancet 359:817-823.
-
(2002)
Lancet
, vol.359
, pp. 817-823
-
-
Vilchez, R.A.1
Madden, C.R.2
Kozinetz, C.A.3
Halvorson, S.J.4
White, Z.S.5
Jorgensen, J.L.6
Finch, C.J.7
Butel, J.S.8
-
47
-
-
0015521499
-
Isolation of virus related to SV40 from patients with progressive multifocal leukoencephalopathy
-
Weiner, L. P., R. M. Herndon, O. Narayan, R. T. Johnson, K. Shah, L. J. Rubinstein, T. J. Preziosi, and F. K. Conley. 1972. Isolation of virus related to SV40 from patients with progressive multifocal leukoencephalopathy. N. Engl. J. Med. 286:385-390.
-
(1972)
N. Engl. J. Med.
, vol.286
, pp. 385-390
-
-
Weiner, L.P.1
Herndon, R.M.2
Narayan, O.3
Johnson, R.T.4
Shah, K.5
Rubinstein, L.J.6
Preziosi, T.J.7
Conley, F.K.8
-
48
-
-
0025300402
-
Towards a natural system of organisms: Proposal for the domains Archaea, Bacteria, and Eucarya
-
Woese, C. R., O. Kandier, and M. L. Wheelis. 1990. Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya. Proc. Natl. Acad. Sci. USA 87:4576-4579.
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 4576-4579
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-
Woese, C.R.1
Kandier, O.2
Wheelis, M.L.3
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