Is Anaptychia monophyletic? A phylogenetic study based on nuclear and mitochondrial genes

Annales Botanici Fennici

Volumn 45, Issue 1, 2008, Pages 55-60

  Lohtander, Katileena ^a   Ahti, Teuvo ^a   Stenroos, Soili ^a   Urbanavichus, Gennadii ^b  

^a UNIVERSITY OF HELSINKI   (Finland)

^b INSTITUTE OF NORTH INDUSTRIAL ECOLOGY PROBLEMS   (Russian Federation)

Author keywords

Anaptychia; ITS; Lichen; mtSSU rDNA; Phylogeny; Physconia

Indexed keywords

ANAPTYCHIA; PHYSCIACEAE; PHYSCONIA;

EID: 41349121836     PISSN: 00033847     EISSN: None     Source Type: Journal    
DOI: 10.5735/085.045.0106     Document Type: Article

References (18)

1. Chen, J. B. & Wang, D. P. 1999: The lichen family Physciaceae (Ascomycota) in China I. The genus Anaptychia. - Mycotaxon 73: 335-342.
2. Cubero, O. F., Crespo, A., Esslinger, T. L. & Lumbsch, H. T. 2004: Molecular phylogeny of the genus Physconia (Ascomycota, Lecanorales) inferred from a Bayesian analysis of nuclear ITS rDNA sequences. - Mycol. Res. 108: 498-505.
3. Gardes, M. & Bruns, T. D. 1993: ITS primers with enhanced specificity for basidiomycetes -application to the identification of mycorrhizae and rusts. - Mol. Ecol. 2: 113-118.
4. Grube, M. & Arup, U. 2001: Molecular and morphological evolution in the Physciaceae (Lecanorales, lichenized Ascomycotina), with special emphasis on the genus Rinodina. - Lichenologist 33: 63-72.
5. Helms, G., Friedl, T. & Rambold, G. 2003: Phylogenetic relationships of the Physciaceae inferred from rDNA sequence data and selected phenotypic characters. - Mycologia 95: 1078-1099.
6. Kulakov, V. G. 2003. Foliose and fruticulose lichens of Baskunchak Lake vicinity. - Bot. Zh. 88: 96-104.
7. Kurokawa, S. 1962: A monograph of the genus Anaptychia. - Beih. Nova Hedwigia 6: 1-115.
8. Kurokawa, S. 1973: Supplementary notes on the genus Anaptychia. - J. Hattori Bot. Lab. 37: 563-607.
9. Lohtander, K., Källersjö, M., Moberg, R. & Tehler, A. 2000: The family Physciaceae in Fennoscandia: phylogeny inferred from ITS sequences. - Mycologia 92: 728-735.
10. Lohtander, K., Oksanen, I. & Rikkinen, J. 2002: A phylogenetic study of Nephroma (lichen-forming Ascomycota). - Mycol. Res. 106: 777-787.
11. Moberg, R. 1994: Is the Pacific a centre of speciation for some foliose genera of the lichen family Physciaceae. - J. Hattori Bot. Lab. 76: 173-181.
12. Moberg, R. 2002: Anaptychia. - Nordic Lichen Flora 2: 9-10.
13. Poelt, J. 1965: Zur Systematik der Flechtenfamilie Physciaceae. - Nova Hedwigia 9: 21-32.
14. Swinscow, T. D. V. & Krog, H. 1976: The genera Anaptychia and Heterodermia in East Africa. - Lichenologist 8: 103-138.
15. Swofford, D. L. 2000: PAUP*. Phylogenetic Analysis Using Parsimony (*and other methods), ver. 4. - Sinauer Assoc., Sunderland, Massachusetts.
16. Thompson, J. D., Higgins, D. G. & Gibson, T. J. 1994: ClustalW: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap-penalties and weigh matrix choice. - Nucleic Acids Res. 22: 4673-4680.
17. Urbanavichus, G. P. & Kulakov, V. G. 2008: A review of the genus Anaptychia (Physciaceae, Ascomycota) in lichen flora of Russia and neighbouring countries. 1. Section Protoanaptychia. - Bot. Zh. [In press].
18. White, T. J., Bruns, T. D., Lee, S. & Taylor, J. W. 1990: Amplification and direct sequencing of fungal ribosomal genes for phylogenetics. - In: Innis, M. A., Gelfand, D. H., Sninsky. J. J. & White, T. J. (eds.), PCR protocols: 315-322. Acad. Press, San Diego.