Identification of RtGST-1, a novel germ cell-specific mRNA-like transcript predominantly expressed in early previtellogenic oocytes in rainbow trout (Oncorhynchus mykiss)

Molecular Reproduction and Development

Volumn 75, Issue 5, 2008, Pages 723-730

  Qiu, Gao Feng ^a,b   Weber, Gregory M ^c   Rexroad III, Caird E ^c   Yao, Jianbo ^a  

^a WEST VIRGINIA UNIVERSITY   (United States)

^b SHANGHAI OCEAN UNIVERSITY   (China)

^c NATIONAL CENTER FOR COOL AND COLD WATER AQUACULTURE   (United States)

Author keywords

Germ cell specific gene; Noncoding transcript; Vitellogenesis

Indexed keywords

COMPLEMENTARY DNA; MESSENGER RNA;

ANIMAL CELL; ARTICLE; CELL DIFFERENTIATION; CODON; CONTROLLED STUDY; DNA LIBRARY; EMBRYO DEVELOPMENT; GAMETOGENESIS; GENE; GENE IDENTIFICATION; GERM CELL; IN SITU HYBRIDIZATION; NONHUMAN; NORTHERN BLOTTING; NUCLEOTIDE SEQUENCE; OOCYTE; OOCYTE DEVELOPMENT; OPEN READING FRAME; ORGANOGENESIS; OVARY; PRIORITY JOURNAL; RAINBOW TROUT; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA ISOLATION; RNA PURIFICATION; RTGST 1 GENE; SPERMATOGENESIS; VITELLOGENESIS;

ANIMALS; CODON, INITIATOR; DNA, COMPLEMENTARY; FEMALE; FISH PROTEINS; GENE EXPRESSION REGULATION; IN SITU HYBRIDIZATION; MALE; ONCORHYNCHUS MYKISS; OOCYTES; OPEN READING FRAMES; ORGAN SPECIFICITY; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA, MESSENGER; SPERMATOCYTES; TESTIS; VITELLOGENESIS;

ONCORHYNCHUS MYKISS;

EID: 41149100235     PISSN: 1040452X     EISSN: 10982795     Source Type: Journal    
DOI: 10.1002/mrd.20827     Document Type: Article

References (45)

1. Bachvarova R, De Leon V, Johnson A, Kaplan G, Paynton BV. 1985. Changes in total RNA, polyadenylated RNA, and actin mRNA during meiotic maturation of mouse oocytes. Dev Biol 108:325-331.
2. Bartholomew RA, Parks JE. 2006. Identification, localization, and sequencing of fetal bovine VASA homolog. Anim Reprod Sci doi:10.1016/j. anireprosci.2006.1009.1017.
3. Bromage N, Cumaranatunga R. 1988. Egg production in the rainbow trout. In: Muir J, Roberts R, editors. Recent advances in aquaculture. London: Croom Helm. pp 63-138.
4. Brown CJ, Hendrich BD, Rupert JL, Lafreniere RG, Xing Y, Lawrence J, Willard HF. 1992. The human XIST gene: Analysis of a 17 kb inactive X-specific RNA that contains conserved repeats and is highly localized within the nucleus. Cell 71:527-542.
5. Castrillon DH, Quade BJ, Wang TY, Quigley C, Crum CP. 2000. The human VASA gene is specifically expressed in the germ cell lineage. Proc Natl Acad Sci USA 97:9585-9590.
6. Dong J, Albertini DF, Nishimori K, Kumar TR, Lu N, Matzuk MM. 1996. Growth differentiation factor-9 is required during early ovarian folliculogenesis. Nature 383:531-535.
7. Dube JL, Wang P, Elvin J, Lyons KM, Celeste AJ, Matzuk MM. 1998. The bone morphogenetic protein 15 gene is X-linked and expressed in oocytes. Mol Endocrinol 12:1809-1817.
8. Epifano O, Liang LF, Dean J. 1995. Mouse Zp1 encodes a zona pellucida protein homologous to egg envelope proteins in mammals and fish. J Biol Chem 270:27254-27258.
9. Eppig JJ. 2001. Oocyte control of ovarian follicular development and function in mammals. Reproduction 122:829-838.
10. Erdmann VA, Szymanski M, Hochberg A, de Groot N, Barciszewski J. 1999. Collection of mRNA-like non-coding RNAs. Nucleic Acids Res 27:192-195.
11. Erdmann VA, Szymanski M, Hochberg A, Groot N, Barciszewski J. 2000. Non-coding, mRNA-like RNAs database Y2K. Nucleic Acids Res 28:197-200.
12. Fujiwara Y, Komiya T, Kawabata H, Sato M, Fujimoto H, Furusawa M, Noce T. 1994. Isolation of a DEAD-family protein gene that encodes a murine homolog of Drosophila vasa and its specific expression in germ cell lineage. Proc Natl Acad Sci USA 91:12258-12262.
13. Guigon CJ, Magre S. 2006. Contribution of germ cells to the differentiation and maturation of the ovary: Insights from models of germ cell depletion. Biol Reprod 74:450-458.
14. Hayashi M, McGee EA, Min G, Klein C, Rose UM, van Duin M, Hsueh AJ. 1999. Recombinant growth differentiation factor-9 (GDF-9) enhances growth and differentiation of cultured early ovarian follicles. Endocrinology 140:1236-1244.
15. Huang Y, Carmichael GG. 1996. Role of polyadenylation in nucleocytoplasmic transport of mRNA. Mol Cell Biol 16:1534-1542.
16. Inagaki S, Numata K, Kondo T, Tomita M, Yasuda K, Kanai A, Kageyama Y. 2005. Identification and expression analysis of putative mRNA-like non-coding RNA in Drosophila. Genes Cells 10:1163-1173.
17. Komiya T, Tanigawa Y. 1995. Cloning of a gene of the DEAD box protein family which is specifically expressed in germ cells in rats. Biochem Biophys Res Commun 207:405-410.
18. Komiya T, Itoh K, Ikenishi K, Furusawa M. 1994. Isolation and characterization of a novel gene of the DEAD box protein family which is specifically expressed in germ cells of Xenopus laevis. Dev Biol 162:354-363.
19. Kozak M. 1987. An analysis of 5′-noncoding sequences from 699 vertebrate messenger RNAs. Nucleic Acids Res 15:8125-8148.
20. Kozak M. 1991. An analysis of vertebrate mRNA sequences: Intimations of translational control. J Cell Biol 115:887-903.
21. Kusakabe M, Nakamura I, Young G. 2003. 11beta-hydroxysteroid dehydrogenase complementary deoxyribonucleic acid in rainbow trout: Cloning, sites of expression, and seasonal changes in gonads. Endocrinology 144:2534-2545.
22. Liang LF, Chamow SM, Dean J. 1990. Oocyte-specific expression of mouse Zp-2: developmental regulation of the zona pellucida genes. Mol Cell Biol 10:1507-1515.
23. Liang L, Soyal SM, Dean J. 1997. FIGalpha, a germ cell specific transcription factor involved in the coordinate expression of the zona pellucida genes. Development 124:4939-4947.
24. Martinho RG, Kunwar PS, Casanova J, Lehmann R. 2004. A noncoding RNA is required for the repression of RNApolII-dependent transcription in primordial germ cells. Curr Biol 14:159-165.
25. Mattick JS. 2001. Non-coding RNAs: The architects of eukaryotic complexity. EMBO Rep 2:986-991.
26. Matzuk MM, Burns KH, Viveiros MM, Eppig JJ. 2002. Intercellular communication in the mammalian ovary: Oocytes carry the conversation. Science 296:2178-2180.
27. Meller VH, Wu KH, Roman G, Kuroda MI, Davis RL. 1997. roX1 RNA paints the X chromosome of male Drosophila and is regulated by the dosage compensation system. Cell 88:445-457.
28. Nakamura A, Amikura R, Mukai M, Kobayashi S, Lasko PF. 1996. Requirement for a noncoding RNA in Drosophila polar granules for germ cell establishment. Science 274:2075-2079.
29. Noce T, Okamoto-Ito S, Tsunekawa N. 2001. Vasa homolog genes in mammalian germ cell development. Cell Struct Funct 26:131-136.
30. Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, Kondo S, Nikaido I, Osato N, Saito R, Suzuki H, Yamanaka I, Kiyosawa H, Yagi K, Tomaru Y, Hasegawa Y, Nogami A, Schonbach C, Gojobori T, Baldarelli R, Hill DP, Bult C, Hume DA, Quackenbush J, Schriml LM, Kanapin A, Matsuda H, Batalov S, Beisel KW, Blake JA, Bradt D, Brusic V, Chothia C, Corbani LE, Cousins S, Dalla E, Dragani TA, Fletcher CF, Forrest A, Frazer KS, Gaasterland T, Gariboldi M, Gissi C, Godzik A, Gough J, Grimmond S, Gustincich S, Hirokawa N, Jackson IJ, Jarvis ED, Kanai A, Kawaji H, Kawasawa Y, Kedzierski RM, King BL, Konagaya A, Kurochkin IV, Lee Y, Lenhard B, Lyons PA, Maglott DR, Maltais L, Marchionni L, McKenzie L, Miki H, Nagashima T, Numata K, Okido T, Pavan WJ, Pertea G, Pesole G, Petrovsky N, Pillai R, Pontius JU, Qi D, Ramachandran S, Ravasi T, Reed JC, Reed DJ, Reid J, Ring BZ, Ringwald M, Sandelin A, Schneider C, Semple CA, Setou M, Shimada K, Sultana R, Takenaka Y, Taylor MS, Teasdale RD, Tomita M, Verardo R, Wagner L, Wahlestedt C, Wang Y, Watanabe Y, Wells C, Wilming LG, Wynshaw-Boris A, Yanagisawa M, Yang I, Yang L, Yuan Z, Zavolan M, Zhu Y, Zimmer A, Carninci P, Hayatsu N, Hirozane-Kishikawa T, Konno H, Nakamura M, Sakazume N, Sato K, Shiraki T, Waki K, Kawai J, Aizawa K, Arakawa T, Fukuda S, Hara A, Hashizume W, Imotani K, Ishii Y, Itoh M, Kagawa I, Miyazaki A, Sakai K, Sasaki D, Shibata K, Shinagawa A, Yasunishi A, Yoshino M, Waterston R, Lander ES, Rogers J, Birney E, Hayashizaki Y. 2002. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature 420:563-573.
31. Ota T, Suzuki Y, Nishikawa T, Otsuki T, Sugiyama T, Irie R, Wakamatsu A, Hayashi K, Sato H, Nagai K, Kimura K, Makita H, Sekine M, Obayashi M, Nishi T, Shibahara T, Tanaka T, Ishii S, Yamamoto J, Saito K, Kawai Y, Isono Y, Nakamura Y, Nagahari K, Murakami K, Yasuda T, Iwayanagi T, Wagatsuma M, Shiratori A, Sudo H, Hosoiri T, Kaku Y, Kodaira H, Kondo H, Sugawara M, Takahashi M, Kanda K, Yokoi T, Furuya T, Kikkawa E, Omura Y, Abe K, Kamihara K, Katsuta N, Sato K, Tanikawa M, Yamazaki M, Ninomiya K, Ishibashi T, Yamashita H, Murakawa K, Fujimori K, Tanai H, Kimata M, Watanabe M, Hiraoka S, Chiba Y, Ishida S, Ono Y, Takiguchi S, Watanabe S, Yosida M, Hotuta T, Kusano J, Kanehori K, Takahashi-Fujii A, Hara H, Tanase TO, Nomura Y, Togiya S, Komai F, Hara R, Takeuchi K, Arita M, Imose N, Musashino K, Yuuki H, Oshima A, Sasaki N, Aotsuka S, Yoshikawa Y, Matsunawa H, Ichihara T, Shiohata N, Sano S, Moriya S, Momiyama H, Satoh N, Takami S, Terashima Y, Suzuki O, Nakagawa S, Senoh A, Mizoguchi H, Goto Y, Shimizu F, Wakebe H, Hishigaki H, Watanabe T, Sugiyama A, Takemoto M, Kawakami B, Yamazaki M, Watanabe K, Kumagai A, Itakura S, Fukuzumi Y, Fujimori Y, Komiyama M, Tashiro H, Tanigami A, Fujiwara T, Ono T, Yamada K, Fujii Y, Ozaki K, Hirao M, Ohmori Y, Kawabata A, Hikiji T, Kobatake N, Inagaki H, Ikema Y, Okamoto S, Okitani R, Kawakami T, Noguchi S, Itoh T, Shigeta K, Senba T, Matsumura K, Nakajima Y, Mizuno T, Morinaga M, Sasaki M, Togashi T, Oyama M, Hata H, Watanabe M, Komatsu T, Mizushima-Sugano J, Satoh T, Shirai Y, Takahashi Y, Nakagawa K, Okumura K, Nagase T, Nomura N, Kikuchi H, Masuho Y, Yamashita R, Nakai K, Yada T, Nakamura Y, Ohara O, Isogai T, Sugano S. 2004. Complete sequencing and characterization of 21,243 full-length human cDNAs. Nat Genet 36:40-45.
32. Otsuka F, Yao Z, Lee T, Yamamoto S, Erickson GF, Shimasaki S. 2000. Bone morphogenetic protein-15. Identification of target cells and biological functions. J Biol Chem 275:39523-39528.
33. Philpott CC, Ringuette MJ, Dean J. 1987. Oocyte-specific expression and developmental regulation of ZP3, the sperm receptor of the mouse zona pellucida. Dev Biol 121:568-575.
34. Qiu GF, Yamano K. 2005. Three forms of cyclin B transcripts in the ovary of the kuruma prawn Marsupenaeus japonicus: Their molecular characterizations and expression profiles during oogenesis. Comp Biochem Physiol B Biochem Mol Biol 141:186-195.
35. Qiu GF, Ramachandra RK, Rexroad CE III, Yao J. 2007. Molecular characterization and expression profiles of cyclin Bl, B2 and Cdc2 kinase during oogenesis and spermatogenesis in rainbow trout (Oncorhynchus mykiss). Anim Reprod Sci doi:10.1016/j.anireprosci.2007.03.005.
36. Ramachandra RK, Lankford SE, Weber GM, Rexroad CE III, Yao J. 2007. Identification of OORP-T, a novel oocyte-specific gene encoding a protein with a conserved oxysterol binding protein domain in rainbow trout. Mol Reprod Dev 74:502-511.
37. Sawata M, Yoshino D, Takeuchi H, Kamikouchi A, Ohashi K, Kubo T. 2002. Identification and punctate nuclear localization of a novel noncoding RNA, Ks-1, from the honeybee brain. RNA 8:772-785.
38. Sawata M, Takeuchi H, Kubo T. 2004. Identification and analysis of the minimal promoter activity of a novel noncoding nuclear RNA gene, AncR-1, from the honeybee (Apis mellifera L.). RNA 10:1047-1058.
39. Schultz RM. 1993. Regulation of zygotic gene activation in the mouse. Bioessays 15:531-538.
40. Shabalina SA, Ogurtsov AY, Kondrashov VA, Kondrashov AS. 2001. Selective constraint in intergenic regions of human and mouse genomes. Trends Genet 17:373-376.
41. Soyal SM, Amleh A, Dean J. 2000. FIGalpha, a germ cell-specific transcription factor required for ovarian follicle formation. Development 127:4645-4654.
42. Telford NA, Watson AJ, Schultz GA. 1990. Transition from maternal to embryonic control in early mammalian development: A comparison of several species. Mol Reprod Dev 26:90-100.
43. Vitt UA, Mazerbourg S, Klein C, Hsueh AJ. 2002. Bone morphogenetic protein receptor type II is a receptor for growth differentiation factor-9. Biol Reprod 67:473-480.
44. Yao J, Higgins AD, Rexroad CE. 2005. Transcriptome analyses of rainbow trout oocytes. Plant & animal genome XIII conference, San Diego, CA http://www.intl-pag.org/13/abstracts/PAG13_P033.html.
45. Yoshizaki G, Sakatani S, Tominaga H, Takeuchi T. 2000. Cloning and characterization of a vasa-like gene in rainbow trout and its expression in the germ cell lineage. Mol Reprod Dev 55:364-371.