Chemical derivatization of compact disc polycarbonate surfaces for SNPs detection

Bioconjugate Chemistry

Volumn 19, Issue 3, 2008, Pages 665-672

  Bañuls, María José ^a   García Piñón, Francisco ^a   Puchades, Rosa ^a   Maquieira, Ángel ^a  

^a UNIVERSITAT POLITÈCNICA DE VALÈNCIA   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

CHEMICAL DETECTION; CHEMICAL MODIFICATION; COMPACT DISK PLAYERS; OLIGONUCLEOTIDES; OPTICAL PROPERTIES; SURFACE TREATMENT;

% REDUCTIONS; AFFINITY ASSAYS; CHEMICAL DERIVATIZATION; CLINIC MONITORING; DISK SURFACES; GENOMICS/PROTEOMICS; HEALTH MONITORING; HIGH-THROUGHPUT; SINGLE NUCLEOTIDE POLYMORPHISMS; SURFACE-BASED;

POLYCARBONATES;

COMPLEMENTARY DNA; GLUTARALDEHYDE; OLIGONUCLEOTIDE; POLYCARBONATE;

ARTICLE; CHEMICAL MODIFICATION; CHEMICAL REACTION; COMPACT DISK; COMPUTER PROGRAM; DNA HYBRIDIZATION; INFRARED SPECTROSCOPY; METHYLATION; MICROARRAY ANALYSIS; NITRATION; OLIGONUCLEOTIDE PROBE; SINGLE NUCLEOTIDE POLYMORPHISM;

EID: 41149088726     PISSN: 10431802     EISSN: None     Source Type: Journal    
DOI: 10.1021/bc7003457     Document Type: Article

References (38)

1. Schena, M. (2003) DNA Microarray Analysis, John Wiley and Sons, Inc., Hoboken, NJ.
2. Wilson, D. S., and Nock, S. (2002) Functional protein microarrays. Curr. Opin. Chem. Biol. 6, 81-85.
3. Consolandi, C., Severgnini, M., Castiglioni, B., Bordoni, R., Frosini, A., Battaglia, C., Bernardi, L. R., and De Bellis, G. (2006) A structured chitosan-based platform for biomolecule attachment to solid surfaces: application to DNA microarray preparation. Bioconjugate Chem. 17 (2), 371-377.
4. Zammatteo, N., Jeanmort, L., Hamels, S., Courtuis, S., Louette, P., Hevesi, L., and Remacle, J. (2000) Comparison between different strategies of covalent attachment of DNA to glass surfaces to build DNA microarrays. Anal. Biochem. 280 (1), 143-150.
5. Patnaik, S., Swami, A., Sethi, D., Pathak, A., Garg, B. S., Gupta, K. C., and Kumar, P. (2007) N-(Iodoacetyl)-N′-(anthraquinon-2-oyl) -ethylenediamine (IAED): a new heterobifunctional reagent for the preparation of biochips. Bioconjugate Chem. 18 (1), 8-12.
6. Schena, M., Shalon, D., Davis, R. W., and Brown, P. O. (1995) Quantitative monitoring of gene expression patterns with a complementary DNA microarray. Science 270, A61-410.
7. Vainrub, A., and Pettitt, B. M. (2003) Sensitive quantitative nucleic acid detection using oligonucleotide microarrays. J. Am. Chem. Soc. 125 (26), 7798-7799.
8. Becker, H., and Locascio, L. E. (2002) Polymer microfluidic devices. Talanta 56 (2), 267-287.
9. Lin, H., Kim, J., Sun, L., and Crooks, R. M. (2006) Replication of DNA microarrays from zip code masters. J. Am. Chem. Soc. 128 (10), 3268-3272.
10. Henry, A. C., Tutt, T. J., Galloway, M., Davidson, Y. Y., McWhorter, C. S., Soper, S. A., and McCarley, R. L. (2000) Surface modification of poly. (methyl methacrylate) used in the fabrication of microanalytical devices. Anal. Chem. 72, 5331-5337.
11. Clark, D. T., and Feast, W. J. (1978) Polymer Surfaces, Wiley, Chinchester.
12. Hoheisel, J. D. (2006) Microarray technology: beyond transcript profiling and genotype analysis. Nat. Rev. Genet. 7 (3), 200-210.
13. Soper, S. A., Henry, A. C., Vaidya, B., Galloway, M., Wabuyele, M., and McCarley, R. L. (2002) Surface modification of polymer-based microfluidic devices. Anal. Chim. Acta 470 (1), 87-99.
14. Reyes, D. R., Iossifidis, D., Auroux, P. A., and Manz, A. (2002) Micro total analysis systems. 1. introduction, theory, and technology. Anal. Chem. 74 (12), 2623-2636.
15. Auroux, P. A., Iossifidis, D., Reyes, D. R., and Manz, A. (2002) Micro total analysis systems. 2. analytical standard operations and applications. Anal. Chem. 74 (12), 2637-2652.
16. Madou, M., Zoval, J., Jia, G., Kido, H., Kim, J., and Kim, N. (2006) Lab on a CD. Annu. Rev. Biomed. Eng. 8, 601-628.
17. Kido, H., Maquieira, A., and Hammock, B. (2000) Disc-based immunoassay microarrays. Anal. Chim. Acta 411, 1-11.
18. Pohlmann, K. C. (1992) The Compact Disc Handbook, A-R Editions, Madison, WI.
19. Heise, C., and Bier, F. F. (2006) Immobilization of DNA on microarrays. Top. Curr. Chem. 261, 1-25.
20. Morais, S., Marco-Molés, A., Puchades, R., and Maquieira, A. (2006) DNA microarraying on compact disc surfaces. Application to the analysis of single nucleotide polymorphisms in Plum Pox virus. Chem. Commun. 22, 2368-2370.
21. Morais, S., Carrascosa, J., Mira, D., Puchades, R., and Maquieira, A. (2007) Micro-immunoanalysis on standard compact discs to determine low abundant compounds. Anal. Chem. 79 (20), 7628-7635.
22. Carion, O., Souplet, V., Olivier, C., Maillet, C., Medard, N., El-Mahdi, O., Durand, J. O., and Melnyk, O. (2007) Chemical micropatterning of polycarbonate for site-specific peptide immobilization and biomolecular interactions. ChemBioChem 8, 315-322.
23. Bora, U., Sharma, P., Kumara, S., Kannanb, K., and Nahar, P. (2006) Photochemical activation of a polycarbonate surface for covalent immobilization of a protein ligand. Talanta 70, 624-629.
24. Garbassi, F., Morra, M., and Occhiello, E. (1994) Polymer Surfaces, Wiley, Chichester.
25. Chan, C. M. (1993) Polymer Surface Modification and Characterization, Hanser Publications, Munich.
26. Remade, J., Alexandre, I., and Houbion, Y. US Patent 177144, 2002.
27. La Clair, J. J., and Burkart, M. D. (2003) Molecular screening on a compact disc. Org. Biol. Chem. 1, 3244-3249.
28. Li, Y., Wang, Z., Ou, L. M. L., and Yu, H.-Y. (2007) DNA detection on plastic: Surface activation protocol to convert polycarbonate substrates to biochip platforms. Anal. Chem. 79, 426-433.
29. Yu, H. Z. (2001) Self-assembly on "recordable CDs". Anal. Chem. 73 (19), 4743-4747.
30. Yu, H. Z., Rowe, A. W., and Waugh, D. M. (2002) Templated electrochemical deposition of zirconia thin films on "recordable CDs". Anal. Chem. 74 (22), 5742-5747.
31. Yu, H.-Z. (2004) New chemistry on old CDs. Chem. Commun. 23, 2633-2636.
32. Bañuls, M. J., Gonzalez-Pedro, M. V., Puchades, R., and Maquieira, A. (2007) PMMA-Isocyanate-modified digital disc as support for oligonucleotide based assays. Bioconjugate Chem. 18 (5), 1408-1414.
33. Maquieira, A., Puchades, R., Bañuls M. J., Mira, D., Llorente-Sáez, R., and Martí, J. (2006) System for Chemical Analysis and Data Storage and Treatment on Compact Discs. European Patent Pending, P160ES00, 2006.
34. Vazquez, J., Qushair, G., and Albericio, F. (2003) Tests for SPS. Methods Enzym. 369, 21-27.
35. Cao, X., Wang, Y. F., Zhang, C. F., and Gao, W. J. (2006) Visual DNA microarrays for simultaneous detection of Ureaplasma urealyticum and Chlamydia trachomatis coupled with multiplex asymmetrical PCR. Biosens. Bioelectron. 22, 393-398.
36. Alexandre, I., Hamels, S., Dufour, S., Collet, J., Zammatteo, N., De Longueville, F., Gala, J. L., and Remade, J. (2001) Colorimetric silver detection of DNA microarrays. Anal. Biochem. 295, 1-8.
37. Hermanson, G. T. (1996) Bioconjugate Techniques, Academic Press, San Diego, CA.
38. Wong, S. S. (1991) Homobifunctional cross-linking reagents. In Chemistry of protein conjugation and cross-linking pp 75, CRC Press Inc., Boca Raton.