Cyanobacterial diversity and halotolerance in a variable hypersaline environment

Microbial Ecology

Volumn 55, Issue 3, 2008, Pages 453-465

  Kirkwood, Andrea E ^a,c   Buchheim, Julie A ^b,d   Buchheim, Mark A ^b   Henley, William J ^a  

^a OKLAHOMA STATE UNIVERSITY   (United States)

^b UNIVERSITY OF TULSA   (United States)

^c UNIVERSITY OF CALGARY   (Canada)

^d OKLAHOMA STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; RIBOSOME DNA; RNA 16S;

ARTICLE; BIODIVERSITY; CHEMISTRY; CLASSIFICATION; CYANOBACTERIUM; DNA SEQUENCE; ECOSYSTEM; GENETICS; ISOLATION AND PURIFICATION; MICROBIOLOGY; MOLECULAR GENETICS; PHYLOGENY; PHYSIOLOGY; SALINITY; SEDIMENT; SEQUENCE ALIGNMENT; SOIL; UNITED STATES;

BIODIVERSITY; CYANOBACTERIA; DNA, BACTERIAL; DNA, RIBOSOMAL; ECOSYSTEM; GEOLOGIC SEDIMENTS; MOLECULAR SEQUENCE DATA; OKLAHOMA; PHYLOGENY; RNA, RIBOSOMAL, 16S; SALINITY; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SOIL; SOIL MICROBIOLOGY; WATER MICROBIOLOGY;

CYANOBACTERIA; GEITLERINEMA; PHORMIDIUM;

EID: 41049115776     PISSN: 00953628     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00248-007-9291-5     Document Type: Article

References (49)

1. Alef K, Nannipieri P (1995) Methods in applied soil microbiology and biochemistry. Academic Press, New York, New York, USA, p 608
2. Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ (1997) Nucl Acids Res 25:3389-4402
3. Anagnostidis K, Komarek J (1988) Arch Hydrobiol Suppl 80:327-472
4. Ballot A, Dadheech PK, Krienitz L (2004) Arch Hydrobiol Suppl Algol Stud 113:37-56
5. Bauld J (1981) Hydrobiologia 81:87-111
6. Beer S, Eshel A (1985) Aust J Mar Fresh Res 36:785-792
7. Berman-Frank I, Lundgren P, Falkowski P (2003) Res Microbiol 154:157-164
8. Brock TD (1976) Arch Microbiol 107:109-111
9. Buchheim MA, Buchheim JA, Carlson T, Kugrens P (2002) J Phycol 38:376-383
10. Buchheim MA, Chapman RL (1992) J Phycol 28:362-374
11. Buchheim MA, Lemieux C, Otis C, Gutell RR, Chapman RL, Turmel M (1996) Mol Phylogenet Evol 5:391-402
12. Burke CM (1995) Microb Ecol 29:163-171
13. Burns BP, Goh F, Allen M, Neilan BA (2004) Environ Microbiol 6:1096-1101
14. Campbell SE, Golubic S (1985) Arch Hydrobiol Suppl 71(38/39):311-329
15. Casillas-Martinez L, Gonzalez M, Fuentes-Figueroa Z, Castro C, Nieves-Mendez D, Hernandez C, Ramirez W, Sytsma R, Perez-Jimenez J, Visscher P (2005) Geomicrobiol J 22:269-281
16. Caumette P (1993) Experientia 49:473-481
17. Davis JS (1978) Aquat Bot 4:23-42
18. Demergasso C, Chong G, Galleguillos P, Escudero L, Martinez-Alonso M, Esteve I (2003) Rev Chil Hist Nat 76:485-499
19. Dubinin AV, Gerasimenko LM, Zavarzin GA (1992) Microbiology 61:593-597
20. Garcia-Pichel F, Nübel U, Muyzer G (1998) Arch Microbiol 169:469-482
21. Giraud A, Matic I, Tenaillon O, Clara A, Radman M, Fons M, Taddei F (2001) Science 291:2606-2608
22. Gorbushina AA, Krumbein WE (1999) Poikilotrophic response of microorganisms to shifting alkalinity, salinity, temperature and water potential. In: Oren A (ed) Microbiology and Biogeochemistry of Hypersaline Environments. CRC Press, Boca Raton, Florida, USA, p 359
23. Henley WJ, Levavasseur G, Franklin LA, Osmond CB, Ramus J (1991) Planta 184:235-243
24. Henley WJ, Major KM, Hironaka JL (2002) J Phycol 38:757-766
25. Jeffrey SW, Humphrey GF (1975) Biochem Physiol 167:191-194
26. Johnson KS (1980) Guidebook for Geologic Field Trips in Oklahoma. Book II: Northwest Oklahoma. University of Oklahoma, Norman, Oklahoma, USA
27. Kirkwood AE, Henley WJ (2006) J Phycol 42:537-547
28. Komarek J, Anagnostidis K (1986) Arch Hydrobiol Suppl 73:157-226
29. Maddison WP, Maddison DR (2001) MacClade. Sinauer Associates, Sunderland, MA, USA
30. McKenzie GJ, Rosenberg SM (2001) Curr Opin Microbiol 4:586-594
31. Moxon ER, Rainey PB, Nowak MA, Lenski RE (1994) Curr Biol 4:24-33
32. Nübel U, Garcia-Pichel F, Kühl M, Muyzer G (1999) Hydrobiol 401:199-206
33. Nübel U, Garcia-Pichel F, Muyzer G (1997) Appl Environ Microbiol 63:3327-3332
34. Nübel U, Garcia-Pichel F, Muyzer G (2000) Int J Syst Evol Microbiol 50:1265-1277
35. Omoregie EO, Crumbliss LL, Bebout BM, Zehr JP (2004) FEMS Microbiol Ecol 47:305-318
36. Oren A (2000) Salts and brines In: Whitton BA, Potts MA (eds) The ecology of cyanobacteria. Kluwer Academic Publishers, The Netherlands. p. 281-306
37. Posada D, Crandall K (1998) Bioinformatics 14:817-818
38. Potter AT, Palmer MW, Henley WJ (2006) Am Midl Nat 156:65-74
39. Robertson BR, Tezuka N, Watanabe MM (2001) Int J Syst Evol Microbiol 51:861-867
40. Rothschild LJ, Giver LJ, White MR, Mancinelli RL (1994) J Phycol 30:431-438
41. Sørensen KB, Canfield DE, Teske AP, Oren A (2005) Appl Environ Microbiol 71:7352-7365
42. Stanier RY, Kunisawa R, Mandel M, Cohen-Bazire G (1971) Bacter Rev 35:171-205
43. Starr RC, Zeikus JA (1993) J Phycol 29(2 suppl.):90-91
44. Stolz JF (1990) Distribution of phototrophic microbes in the flat, laminated microbial mat at Laguna Figueroa, Baja California, Mexico. BioSystems 23:345-357
45. Swofford D (2002) PAUP*. Phylogenetic Analysis Using Parsimony (*And Other Methods). Version 4. Sinauer Associates, Sunderland, MA, USA
46. Wilson C, TM Caton, JA Buchheim, MA Buchheim, MA Schneegurt, Miller RV (2004) Microb Ecol 48:541-549
47. Vitousek PM, Cassman K, Cleveland C, Crews T, Field CB, Grimm NB, Howarth RW, Marino R, Martinelli L, Rastetter EB, Sprent JI (2002) Biogeochem 57:1-45
48. Wynn-Williams DD (2000) Cyanobacteria in deserts-Life at the limits? In: Whitton BA, Potts MA (eds) The ecology of cyanobacteria. Kluwer Academic Publishers, The Netherlands p. 341-366
49. Yuan W (1989) Okla Geol Notes 49:200-223