-
1
-
-
0032856157
-
Kinetic and spectroscopic characterization of the gamma-carbonic anhydrase from the Methanoarchaeon Methanosarcina thermophila
-
Alber B.E., Colangelo C.M., Dong J., Stalhandske C.M.V., Baird T.T., Tu C., Fierke C.A., Silverman D.N., Scott R.A., and Ferry J.G. Kinetic and spectroscopic characterization of the gamma-carbonic anhydrase from the Methanoarchaeon Methanosarcina thermophila. Biochemistry 38 (1999) 13119-13128
-
(1999)
Biochemistry
, vol.38
, pp. 13119-13128
-
-
Alber, B.E.1
Colangelo, C.M.2
Dong, J.3
Stalhandske, C.M.V.4
Baird, T.T.5
Tu, C.6
Fierke, C.A.7
Silverman, D.N.8
Scott, R.A.9
Ferry, J.G.10
-
2
-
-
0028234521
-
A carbonic anhydrase from the archaeon Methanosarcina thermophila
-
Alber B.E., and Ferry J.G. A carbonic anhydrase from the archaeon Methanosarcina thermophila. Proc. Natl. Acad. Sci. USA 91 (1994) 6909-6913
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 6909-6913
-
-
Alber, B.E.1
Ferry, J.G.2
-
3
-
-
0032555280
-
The conformational change and active site structure of tetrahydrodipicolinate-N-succinyltransferase
-
Beaman T.W., Blanchard J.S., and Roderick S.L. The conformational change and active site structure of tetrahydrodipicolinate-N-succinyltransferase. Biochemistry 17 (1998) 10363-10369
-
(1998)
Biochemistry
, vol.17
, pp. 10363-10369
-
-
Beaman, T.W.1
Blanchard, J.S.2
Roderick, S.L.3
-
4
-
-
0032510767
-
Structure of the hexapeptide xenobiotic acetyltransferase from Pseudomonas aeruginosa
-
Beaman T.W., Sugantino M., and Roderick S.L. Structure of the hexapeptide xenobiotic acetyltransferase from Pseudomonas aeruginosa. Biochemistry 37 (1998) 6689-6696
-
(1998)
Biochemistry
, vol.37
, pp. 6689-6696
-
-
Beaman, T.W.1
Sugantino, M.2
Roderick, S.L.3
-
5
-
-
0033977581
-
The ASTRAL compendium for structure and sequence analysis
-
Benner S.E., Koehl P., and Levitt M. The ASTRAL compendium for structure and sequence analysis. Nucleic Acids Res. 28 (2000) 254-256
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 254-256
-
-
Benner, S.E.1
Koehl, P.2
Levitt, M.3
-
6
-
-
0022706389
-
The relation between the divergence of sequence and structure in proteins
-
Chothia C., and Lesk A.M. The relation between the divergence of sequence and structure in proteins. EMBO J. 5 (1986) 823-826
-
(1986)
EMBO J.
, vol.5
, pp. 823-826
-
-
Chothia, C.1
Lesk, A.M.2
-
7
-
-
0027983037
-
Convergent evolution: the need to be explicit
-
Doolittle R.F. Convergent evolution: the need to be explicit. Trends Biochem. Sci. 19 (1994) 15-18
-
(1994)
Trends Biochem. Sci.
, vol.19
, pp. 15-18
-
-
Doolittle, R.F.1
-
9
-
-
0036840353
-
Analysis of protein sequence/structure similarity relationships
-
Gan H.H., Perlow R.A., Roy S., Ko J., Wu M., Huang J., Yan S., Nicoletta A., Vafai J., Sun D., Wang L., Noah J.E., Pasquali S., and Schlick T. Analysis of protein sequence/structure similarity relationships. Biophys. J. 83 (2002) 2781-2791
-
(2002)
Biophys. J.
, vol.83
, pp. 2781-2791
-
-
Gan, H.H.1
Perlow, R.A.2
Roy, S.3
Ko, J.4
Wu, M.5
Huang, J.6
Yan, S.7
Nicoletta, A.8
Vafai, J.9
Sun, D.10
Wang, L.11
Noah, J.E.12
Pasquali, S.13
Schlick, T.14
-
10
-
-
0034576612
-
Evolution and distribution of the carbonic anhydrase gene families
-
Hewett-Emmett D. Evolution and distribution of the carbonic anhydrase gene families. EXS 90 (2000) 29-76
-
(2000)
EXS
, vol.90
, pp. 29-76
-
-
Hewett-Emmett, D.1
-
11
-
-
0030076314
-
Functional diversity, conservation and convergence in the evolution of the α-, β- and γ-carbonic anhydrase gene families
-
Hewett-Emmett D., and Tashian R.E. Functional diversity, conservation and convergence in the evolution of the α-, β- and γ-carbonic anhydrase gene families. Mol. Phylogenet. Evol. 5 (1996) 50-77
-
(1996)
Mol. Phylogenet. Evol.
, vol.5
, pp. 50-77
-
-
Hewett-Emmett, D.1
Tashian, R.E.2
-
13
-
-
0034622579
-
A closer look at the active site of γ-carbonic anhydrases: high resolution crystallographic studies of the carbonic anhydrase from Methanosarcina thermophila
-
Iverson T.M., Alber B.E., Kisker C., Ferry J.G., and Rees D.C. A closer look at the active site of γ-carbonic anhydrases: high resolution crystallographic studies of the carbonic anhydrase from Methanosarcina thermophila. Biochemistry 39 (2000) 9222-9231
-
(2000)
Biochemistry
, vol.39
, pp. 9222-9231
-
-
Iverson, T.M.1
Alber, B.E.2
Kisker, C.3
Ferry, J.G.4
Rees, D.C.5
-
14
-
-
0029874435
-
A left-handed β-helix revealed by the crystal structure of a carbonic anhydrase from the archaeon Methanosarcina thermophila
-
Kisker C., Schindelin H., Alber B., Ferry J., and Rees D. A left-handed β-helix revealed by the crystal structure of a carbonic anhydrase from the archaeon Methanosarcina thermophila. EMBO J. 15 (1996) 2323-2330
-
(1996)
EMBO J.
, vol.15
, pp. 2323-2330
-
-
Kisker, C.1
Schindelin, H.2
Alber, B.3
Ferry, J.4
Rees, D.5
-
15
-
-
0025946277
-
Conformational mobility of His-64 in the Thr-200-Ser mutant of human carbonic anhydrase II
-
Krebs J.F., Fierke C.A., Alexander R.S., and Christianson D.W. Conformational mobility of His-64 in the Thr-200-Ser mutant of human carbonic anhydrase II. Biochemistry 30 (1991) 9153-9160
-
(1991)
Biochemistry
, vol.30
, pp. 9153-9160
-
-
Krebs, J.F.1
Fierke, C.A.2
Alexander, R.S.3
Christianson, D.W.4
-
16
-
-
84908284616
-
Carbonic anhydrase: its preparation and properties
-
Meldrum N.N., and Roughton F.J.W. Carbonic anhydrase: its preparation and properties. Nature 80 (1933) 113-142
-
(1933)
Nature
, vol.80
, pp. 113-142
-
-
Meldrum, N.N.1
Roughton, F.J.W.2
-
17
-
-
0028961335
-
SCOP: a structural classification of proteins database for the investigation of sequences and structures
-
Murzin A.G., Brenner S.E., Hubbard T., and Chothia C. SCOP: a structural classification of proteins database for the investigation of sequences and structures. J. Mol. Biol. 247 (1995) 536-540
-
(1995)
J. Mol. Biol.
, vol.247
, pp. 536-540
-
-
Murzin, A.G.1
Brenner, S.E.2
Hubbard, T.3
Chothia, C.4
-
18
-
-
0026351203
-
Structural properties of human carbonic anhydrase II at pH 9.5
-
Nair S.K., and Christianson D.W. Structural properties of human carbonic anhydrase II at pH 9.5. Biochem. Biophys. Res. Commun. 181 (1991) 579-584
-
(1991)
Biochem. Biophys. Res. Commun.
, vol.181
, pp. 579-584
-
-
Nair, S.K.1
Christianson, D.W.2
-
19
-
-
0009593678
-
Unexpected pH-dependent conformation of His-64, the proton shuttle of carbonic anhydrase II
-
Nair S.K., and Christianson D.W. Unexpected pH-dependent conformation of His-64, the proton shuttle of carbonic anhydrase II. J. Am. Chem. Soc. 113 (1991) 9455-9458
-
(1991)
J. Am. Chem. Soc.
, vol.113
, pp. 9455-9458
-
-
Nair, S.K.1
Christianson, D.W.2
-
20
-
-
41049096797
-
-
Nicholas, K.B., Nicholas, H.B.J., 1997. GeneDoc: a tool for editing and annotating multiple sequence alignments. Distributed by the authors.
-
Nicholas, K.B., Nicholas, H.B.J., 1997. GeneDoc: a tool for editing and annotating multiple sequence alignments. Distributed by the authors.
-
-
-
-
21
-
-
0346848759
-
On the evolution of structure in aminoacyl-tRNA synthetases
-
O'Donoghue P., and Luthey-Schulten Z. On the evolution of structure in aminoacyl-tRNA synthetases. Microbiol. Mol. Biol. Rev. 67 (2003) 550-573
-
(2003)
Microbiol. Mol. Biol. Rev.
, vol.67
, pp. 550-573
-
-
O'Donoghue, P.1
Luthey-Schulten, Z.2
-
22
-
-
13844266306
-
Evolutionary profiles derived from the QR factorization of multiple structural alignments gives an economy of information
-
O'Donoghue P., and Luthey-Schulten Z. Evolutionary profiles derived from the QR factorization of multiple structural alignments gives an economy of information. J. Mol. Biol. 346 (2005) 875-894
-
(2005)
J. Mol. Biol.
, vol.346
, pp. 875-894
-
-
O'Donoghue, P.1
Luthey-Schulten, Z.2
-
23
-
-
0035916240
-
Structure of the Escherichia coli GlmU pyrophosphorylase and acetyltransferase active sites
-
Olsen L.R., and Roderick S.L. Structure of the Escherichia coli GlmU pyrophosphorylase and acetyltransferase active sites. Biochemistry 40 (2001) 1913-1921
-
(2001)
Biochemistry
, vol.40
, pp. 1913-1921
-
-
Olsen, L.R.1
Roderick, S.L.2
-
24
-
-
2442644099
-
Structure of serine acetyltransferase in complexes with CoA and its cysteine feedback inhibitor
-
Olsen L.R., Huang B., Vetting M.W., and Roderick S.L. Structure of serine acetyltransferase in complexes with CoA and its cysteine feedback inhibitor. Biochemistry 43 (2004) 6013-6019
-
(2004)
Biochemistry
, vol.43
, pp. 6013-6019
-
-
Olsen, L.R.1
Huang, B.2
Vetting, M.W.3
Roderick, S.L.4
-
25
-
-
0034028489
-
Evolutionary analysis of γ-carbonic anhydrase and structurally related proteins
-
Parisi G., Fornasari M., and Echave J. Evolutionary analysis of γ-carbonic anhydrase and structurally related proteins. Mol. Phylogenet. Evol. 14 (2000) 323-334
-
(2000)
Mol. Phylogenet. Evol.
, vol.14
, pp. 323-334
-
-
Parisi, G.1
Fornasari, M.2
Echave, J.3
-
26
-
-
4644272171
-
The structure and mechanism of serine acetyltransferase from Escherichia coli
-
Pye V.E., Tingey A.P., Robson R.L., and Moody P.C.E. The structure and mechanism of serine acetyltransferase from Escherichia coli. J. Biol. Chem. 279 (2004) 40729-40736
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 40729-40736
-
-
Pye, V.E.1
Tingey, A.P.2
Robson, R.L.3
Moody, P.C.E.4
-
27
-
-
0028844306
-
A left-handed parallel β helix in the structure of UDP-N-acetylglucosamine acyltransferase
-
Raetz C., and Roderick S. A left-handed parallel β helix in the structure of UDP-N-acetylglucosamine acyltransferase. Science 270 (1995) 997-1000
-
(1995)
Science
, vol.270
, pp. 997-1000
-
-
Raetz, C.1
Roderick, S.2
-
28
-
-
41049090661
-
-
Russell, R.B., 2006. STAMP Structural Alignment of Multiple Proteins Version 4.3 User Guide. Distributed by the authors.
-
Russell, R.B., 2006. STAMP Structural Alignment of Multiple Proteins Version 4.3 User Guide. Distributed by the authors.
-
-
-
-
30
-
-
0026743174
-
Multiple protein sequence alignment from tertiary structure comparison: assignment of global and residue confidence levels
-
Russell R.B., and Barton G.J. Multiple protein sequence alignment from tertiary structure comparison: assignment of global and residue confidence levels. Proteins Struct. Funct. Genet. 14 (1992) 309-323
-
(1992)
Proteins Struct. Funct. Genet.
, vol.14
, pp. 309-323
-
-
Russell, R.B.1
Barton, G.J.2
-
31
-
-
13844284979
-
Evolutionary profiles from the QR factorization of multiple sequence alignments
-
Sethi A., O'Donoghue P., and Luthey-Schulten Z. Evolutionary profiles from the QR factorization of multiple sequence alignments. Proc. Natl. Acad. Sci. USA 102 (2005) 4045-4050
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 4045-4050
-
-
Sethi, A.1
O'Donoghue, P.2
Luthey-Schulten, Z.3
-
34
-
-
0000825481
-
A statistical method for evaluating systematic relationships
-
Sokal R.R., and Michener C.D. A statistical method for evaluating systematic relationships. Univ. Kans. Sci. Bull. 28 (1958) 1409-1438
-
(1958)
Univ. Kans. Sci. Bull.
, vol.28
, pp. 1409-1438
-
-
Sokal, R.R.1
Michener, C.D.2
-
35
-
-
0024349252
-
Protein structure alignment
-
Taylor W.R., and Orengo C.A. Protein structure alignment. J. Mol. Biol. 208 (1989) 208-229
-
(1989)
J. Mol. Biol.
, vol.208
, pp. 208-229
-
-
Taylor, W.R.1
Orengo, C.A.2
-
36
-
-
0034622565
-
A structure-function study of a proton transport pathway in the gamma class carbonic anhydrase from Methanosarcina thermophila
-
Tripp B.C., and Ferry J.G. A structure-function study of a proton transport pathway in the gamma class carbonic anhydrase from Methanosarcina thermophila. Biochemistry 39 (2000) 9232-9240
-
(2000)
Biochemistry
, vol.39
, pp. 9232-9240
-
-
Tripp, B.C.1
Ferry, J.G.2
-
37
-
-
0035966050
-
Carbonic anhydrase: new insights for an ancient enzyme
-
Tripp B.C., Smith K., and Ferry J.G. Carbonic anhydrase: new insights for an ancient enzyme. J. Biol. Chem. 276 (2001) 48615-48618
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 48615-48618
-
-
Tripp, B.C.1
Smith, K.2
Ferry, J.G.3
-
38
-
-
0027121143
-
Eight bacterial proteins, including UDP-N-acetylglucosamine acyltransferase (LpxA) and three other transferases of Escherichia coli, consist of a six-residue periodicity theme
-
Vaara M. Eight bacterial proteins, including UDP-N-acetylglucosamine acyltransferase (LpxA) and three other transferases of Escherichia coli, consist of a six-residue periodicity theme. FEMS Microbiol. Lett. 97 (1992) 249-254
-
(1992)
FEMS Microbiol. Lett.
, vol.97
, pp. 249-254
-
-
Vaara, M.1
-
39
-
-
0028031940
-
The novel hexapeptide motif found in the acetyltransferases LpxA and LpxD of lipid A biosynthesis is conserved in various bacteria
-
Vuorio R., Harkonen T., Tolvanen M., and Vaara M. The novel hexapeptide motif found in the acetyltransferases LpxA and LpxD of lipid A biosynthesis is conserved in various bacteria. FEBS Lett. 337 (1994) 289-292
-
(1994)
FEBS Lett.
, vol.337
, pp. 289-292
-
-
Vuorio, R.1
Harkonen, T.2
Tolvanen, M.3
Vaara, M.4
-
40
-
-
0033578887
-
The active site of Escherichia coli UDP-N-acetylglucosamine acyltransferase. Chemical modification and site-directed mutagenesis.
-
Wyckoff T.J.O., and Raetz C.R.H. The active site of Escherichia coli UDP-N-acetylglucosamine acyltransferase. Chemical modification and site-directed mutagenesis. J. Biol. Chem. 274 (1999) 27047-27055
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 27047-27055
-
-
Wyckoff, T.J.O.1
Raetz, C.R.H.2
|