Differential gene expression analysis of iodide-treated rat thyroid follicular cell line PCCl3

Genomics

Volumn 91, Issue 4, 2008, Pages 356-366

  Leoni, S G ^a   Galante, P A ^b   Ricarte Filho, J C M ^a   Kimura, E T ^a  

^a UNIVERSITY OF SÃO PAULO   (Brazil)

^b LUDWIG INSTITUTE FOR CANCER RESEARCH   (Brazil)

Author keywords

Autoregulation; Differential gene expression; Iodine; Iodine excess; Methimazole; PCCl3 lineage; SAGE; Thyroid; Thyroid differentiation; Transcriptome

Indexed keywords

IODIDE; SODIUM IODIDE; SODIUM IODIDE SYMPORTER; THYROGLOBULIN; THYROID PEROXIDASE; THYROTROPIN RECEPTOR;

ANIMAL CELL; ARTICLE; CELL DIFFERENTIATION; CELL LINEAGE; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENE REPRESSION; GENETIC TRANSCRIPTION; NONHUMAN; NUCLEOTIDE SEQUENCE; OXIDATION; PRIORITY JOURNAL; RAT; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SERIAL ANALYSIS OF GENE EXPRESSION; THYROID FOLLICLE CELL; UNINDEXED SEQUENCE;

ANIMALS; BASE SEQUENCE; CELL LINE; GENE EXPRESSION PROFILING; IODIDES; RATS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA, MESSENGER; THYROID GLAND;

RATTUS;

EID: 41049100251     PISSN: 08887543     EISSN: 10898646     Source Type: Journal    
DOI: 10.1016/j.ygeno.2007.12.009     Document Type: Article

References (50)

1. Greespan M. The thyroid gland. Basic and Clinical Endocrinology (1997), Prentice Hall, London 193-262
2. Dai G., Levy O., and Carrasco N. Cloning and characterization of the thyroid iodide transporter. Nature 379 (1996) 458-460
3. Larsen P.R., Davies T.F., and Hay I.D. Thyroid, Wilson, Foster, Kronemberg & Larsen, Philadelphia (1998)
4. Ingbar S.H. Autoregulation of the thyroid: response to iodide excess and depletion. Mayo Clin. Proc. 47 (1972) 814-823
5. Pisarev M.A. Thyroid autoregulation. J. Endocrinol. Investig. 8 (1985) 475-484
6. Morton M.E., Chaikoff I.L., and Rosenfeld S. Inhibiting effect of inorganic iodide on the formation in vitro of thyroxine and diiodotyrosine by surviving thyroid tissue. J. Biol. Chem. 154 (1944) 381-387
7. Wolff J., and Chaikoff I.L. Plasma inorganic iodide as a homeostatic regulator of thyroid function. J. Biol. Chem. (1948) 555-564
8. Becks G.P., Eggo M.C., and Burrow G.N. Organic iodine inhibits deoxyribonucleic acid synthesis and growth in FRTL-5 thyroid cells. Endocrinology 123 (1988) 545-551
9. Tramontano D., Veneziani B.M., Lombardi A., Villone G., and Ingbar S.H. Iodine inhibits the proliferation of rat thyroid cells in culture. Endocrinology 125 (1989) 984-992
10. Dumont J.E., Lamy F., Roger P., and Maenhaut C. Physiological and pathological regulation of thyroid cell proliferation and differentiation by thyrotropin and other factors. Physiol. Rev. 72 (1992) 667-697
11. Dugrillon A., and Gartner R. The role of iodine and thyroid cell growth. Thyroidology 4 (1992) 31-36
12. - symporter mRNAs in dog thyroid. Mol. Cell. Endocrinol. 131 (1997) 195-203
13. Schena M., Shalon D., Davis R.W., and Brown P.O. Quantitative monitoring of gene expression patterns with a complementary DNA microarray. Science 270 (1995) 467-470
14. Velculescu V.E., Zhang L., Vogelstein B., and Kinzler K.W. Serial analysis of gene expression. Science 270 (1995) 484-487
15. Novak J.P., Sladek R., and Hudson T.J. Characterization of variability in large-scale gene expression data: implications for study design. Genomics 79 (2002) 104-113
16. Tuteja R., and Tuteja N. Serial analysis of gene expression: applications in human studies. J. Biomed. Biotechnol. 26 (2004) 113-120
17. Zhang L., et al. Gene expression profiles in normal and cancer cells. Science 276 (1997) 1268-1272
18. Ambesi-Impiombato F.S., Parks L.A., and Coon H.G. Culture of hormone-dependent functional epithelial cells from rat thyroids. Proc. Natl. Acad. Sci. U. S. A. 77 (1980) 3455-3459
19. Fusco A., et al. One- and two-step transformations of rat thyroid epithelial cells by retroviral oncogenes. Mol. Cell. Biol. (1987) 3365-3370
20. Pauws E., et al. Serial analysis of gene expression as a tool to assess the human thyroid expression profile and to identify novel thyroidal genes. J. Clin. Endocrinol. Metab. 85 (2000) 1923-1927
21. Vilain C., Libert F., Venet D., Costagliola S., and Vassart G. Small amplified RNA-SAGE: an alternative approach to study transcriptome from limiting amount of mRNA. Nucleic Acids Res. 31 (2003) e24
22. Farwell A.P., and Braverman L.E. Thyroid and antithyroid drugs. Goodman & Gilman's: The Pharmacological Basis of Therapeutics (2001), McGraw-Hill, New York 1563-1596
23. Beauchamp N.J., Van Achterberg T.A., Engelse M.A., Pannekoek H., and De Vries C.J. Gene expression profiling of resting and activated vascular smooth muscle cells by serial analysis of gene expression and clustering analysis. Genomics 82 (2003) 288-299
24. Horvath A., et al. Serial analysis of gene expression in adrenocortical hyperplasia caused by a germline PRKAR1A mutation. J. Clin. Endocrinol. Metab. 91 (2006) 584-596
25. Perez-Plasencia C., et al. Characterization of the global profile of genes expressed in cervical epithelium by serial analysis of gene expression (SAGE). BMC Genomics 6 (2005) 130
26. Ma X.H., et al. Serial analysis of gene expression in mouse uterus at the implantation site. J. Biol. Chem. 281 (2006) 9351-9360
27. Lee J.Y., et al. Analysis of gene expression profiles of normal human nasal mucosa and nasal polyp tissues by SAGE. J. Allergy Clin. Immunol. 118 (2006) 134-142
28. Rosenblum J.S., and Kozarich J.W. Prolyl peptidases: a serine protease subfamily with high potential for drug discovery. Curr. Opin. Chem. Biol. 7 (2003) 496-504
29. Osada Y., Shiratsuchi A., and Nakanishi Y. Involvement of mitogen-activated protein kinases in class B scavenger receptor type I-induced phagocytosis of apoptotic cells. Exp. Cell Res. 312 (2006) 1820-1830
30. Kubota H., Hynes G., and Willison K. The chaperonin containing T-complex polypeptide 1 (TCP-1): multisubunit machinery assisting in protein folding and assembly in the eukaryotic cytosol. Eur. J. Biochem. 15 (1995) 3-16
31. 2+ signaling followed by phospholipase-A2 activation and potentiated by an adenosine derivative. Endocrinology 136 (1995) 116-123
32. Kohrle J., Jakob F., Contempre B., and Dumont J.E. Selenium, the thyroid, and the endocrine system. Endocr. Rev. 26 (2005) 944-984
33. Bjorkman U., and Ekholm R. Hydrogen peroxide degradation and glutathione peroxidase activity in cultures of thyroid cells. Mol. Cell. Endocrinol. 111 (1995) 99-107
34. Duntas L.H. The role of selenium in thyroid autoimmunity and cancer. Thyroid 16 (2006) 455-460
35. Esworthy R.S., Swiderek K.M., Ho Y.S., and Chu F.F. Selenium-dependent glutathione peroxidase-GI is a major glutathione peroxidase activity in the mucosal epithelium of rodent intestine. Biochim. Biophys. Acta 1381 (1998) 213-226
36. Perillo N.L., Marcus M.E., and Baum L.G. Galectins: versatile modulators of cell adhesion, cell proliferation, and cell death. J. Mol. Med. 76 (1998) 402-412
37. Plowman G.D., et al. The epithelin precursor encodes two proteins with opposing activities on epithelial cell growth. J. Biol. Chem. 267 (1992) 13073-13078
38. Shinohara M., Chung Y.J., Saji M., and Ringel M.D. Akt in thyroid tumorigenesis and progression. Endocrinology 148 (2007) 942-947
39. Van Aelst L., and D'souza-Schorey C. Rho GTPases and signaling networks. Genes Dev. 11 (1997) 2295-2322
40. Deng J.T., Sutherland C., Brautigan D.L., Eto M., and Walsh M.P. Phosphorylation of the myosin phosphatase inhibitors, CPI-17 and PHI-1, by integrin-linked kinase. Biochem. J. 367 (2002) 517-524
41. Medina D.L., and Santisteban P. Thyrotropin-dependent proliferation of in vitro rat thyroid cell systems. Eur. J. Endocrinol. 143 (2000) 161-178
42. Al-Khafaji F., et al. Biological activity of activating thyrotrophin receptor mutants: modulation by iodide. J. Mol. Endocrinol. 34 (2005) 209-220
43. Eng P.H., Cardona G.R., Previti M.C., Chin W.W., and Braverman L.E. Regulation of the sodium iodide symporter by iodide in FRTL-5 cells. Eur. J. Endocrinol. 144 (2001) 139-144
44. Spitzweg C., Joba W., Morris J.C., and Heufelder A.E. Regulation of sodium iodide symporter gene expression in FRTL-5 rat thyroid cells. Thyroid 9 (1999) 821-830
45. Smerdely P., Pitsiavas V., and Boyages S.C. Methimazole inhibits FRTL5 thyroid cell proliferation by inducing S-phase arrest of the cell cycle. Endocrinology 133 (1993) 2403-2406
46. Taniguchi S., Yoshida A., and Mashiba H. Direct effect of methimazole on rat thyroidal cell growth induced by thyrotropin and insulin-like growth factor I. Endocrinology 124 (1989) 2046-2051
47. Muller P.Y., Janovjak H., Miserez A.R., and Dobbie Z. Processing of gene expression data generated by quantitative real-time RT-PCR. Biotechniques (2002) 1372-1374 (1376, 1378-1379)
48. Ashburner M., et al. Gene Ontology: tool for the unification of biology. Nat. Genet. 25 (2000) 25-29
49. Al-Shahrour F., et al. BABELOMICS: a suite of web tools for functional annotation and analysis of groups of genes in high-throughput experiments. Nucleic Acids Res. 33 (2005) W460-W464
50. Velculescu V.E., Zhang L., Vogelstein B., and Kinzler K.W. Serial analysis of gene expression. Science 270 (1995) 484-487