SSR marker diversity of soybean aphid resistance sources in North America

Genome

Volumn 50, Issue 12, 2007, Pages 1104-1111

  Chen, Charles Y ^a   Gu, Cuihua ^b   Mensah, Clarice ^b   Nelson, Randall L ^c   Wang, Dechun ^b  

^a NATIONAL PEANUT RESEARCH LABORATORY   (United States)

^b MICHIGAN STATE UNIVERSITY   (United States)

^c UNIVERSITY OF ILLINOIS AT URBANA CHAMPAIGN   (United States)

Author keywords

Cluster analysis; Genetic diversity; Soybean aphid resistance; SSR markers

Indexed keywords

ALLELE; ANIMAL; APHID; ARTICLE; CLUSTER ANALYSIS; GENE; GENETIC MARKER; GENETIC POLYMORPHISM; GENETIC VARIABILITY; GENETICS; GENOTYPE; NORTH AMERICA; PLANT DISEASE; SOYBEAN; VARIABLE NUMBER OF TANDEM REPEAT;

ALLELES; ANIMALS; APHIDS; CLUSTER ANALYSIS; GENES, PLANT; GENETIC MARKERS; GENOTYPE; MINISATELLITE REPEATS; NORTH AMERICA; PLANT DISEASES; POLYMORPHISM, GENETIC; SOYBEANS; VARIATION (GENETICS);

EID: 40949140240     PISSN: 08312796     EISSN: None     Source Type: Journal    
DOI: 10.1139/G07-090     Document Type: Article

References (36)

1. Alston, F.H., and Briggs, J.B. 1977. Resistance genes in apple and biotypes of Dysaphis devecta. Ann. Appl. Biol. 87: 75-81.
2. Anderson, J.A., Churchill, G.A., Autrique, J.E., Tanksley, S.D., and Sorrells, M.E. 1992. Optimizing parental selection for genetic linkage maps. Genome, 36: 181-186.
3. Belaj, A., Catoviae, Z., Rallo, L., and Trujillo, I. 2002. Genetic diversity and relationships in olive (Olea europaea L.) germplasm collections as determined by randomly amplified polymorphic DNA. Theor. Appl. Genet. 105: 638-644. 12582515
4. Chen, Y., and Nelson, R.L. 2005. Relationship between origin and genetic diversity in Chinese soybean germplasm. Crop Sci. 45: 1645-1652. 10.2135/cropsci2004.0071
5. Chen, Y., Wang, D., Arelli, P., Ebrahimi, M., and Nelson, R.L. 2006. Molecular marker diversity of SCN resistant sources in soybean. Genome, 49: 938-949. 10.1139/G06-057 17036069
6. Cornelious, B., Chen, P., Chen, Y., de Leon, N., Shannon, J.G., and Wang, D. 2005. Identification of QTLs underlying water-logging tolerance in soybean. Mol. Breed. 16: 103-112. 10.1007/s11032-005-5911-2
7. Cui, Z., Gai, J., Carter, T.E., Qiu, J., and Zhao, T. 1998. The released Chinese soybean cultivars and their pedigree analyses. China Agriculture Press, Beijing, China.
8. Diwan, N., and Cregan, P.B. 1997. Automated sizing of fluorescent labeled simple sequence repeat markers to assay genetic variation in soybean. Theor. Appl. Genet. 95: 723-733. 10.1007/s001220050618
9. Ercan, A.G., Taskin, M., and Turgut, K. 2004. Analysis of genetic diversity in Turkish sesame (Sesamum indicum L.) populations using RAPD markers. Genet. Resour. Crop Evol. 51: 599-607. 10.1023/B:GRES.0000024651.45623.f2
10. Excoffier, L., Smouse, P.E., and Quattro, J.M. 1992. Analysis of molecular variance inferred from metric distance among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics, 131: 479-491. 1644282
11. Excoffier, L., Laval, G., and Schneider, S. 2005. Arlequin (version 3.0): An integrated software package for population genetics data analysis. Evol. Bioinformatics Online [serial online], 1: 47-50. Available from http://la-press.com/cr-data/files/f-EBO-1-ExcoffierSc-231.pdf.
12. Fan, Y.H. 1988. Screening for soybean varieties resistant to the soybean aphid. Soybean Sci. 7: 167-169.
13. Haley, S.D., Peairs, F.B., Walker, C.B., Rudolph, J.B., and Randolph, T.L. 2004. Occurrence of a new Russian wheat aphid biotype in Colorado. Crop Sci. 44: 1589-1592.
14. Hartman, G.L., Domier, L.L., Wax, L.M., Helm, C.G., Onstad, D.W., Shaw, J.T., et al. 2001. Occurrence and distribution of Aphis glycines on soybeans in Illinois in 2000 and its potential control. Available from http://www. plantmanagementnetwork.org/pub/php/brief/aphisglycines/ [accessed 22 August 2007].
15. Hill, C.B., Li, Y., and Hartman, G.L. 2004. Resistance to the soybean aphid in soybean germplasm. Crop Sci. 44: 98-106.
16. Hill, C.B., Li, Y., and Hartman, G.L. 2006. a. A single dominant gene for resistance to the soybean aphid in the soybean cultivar Dowling. Crop Sci. 46: 1601-1605. 10.2135/cropsci2005.11-0421
17. Hill, C.B., Li, Y., and Hartman, G.L. 2006. b. Soybean aphid resistance in soybean Jackson is controlled by a single dominant gene. Crop Sci. 46: 1606-1608. 10.2135/cropsci2005.11-0438
18. Kisha, T., Sneller, C.H., and Diers, B.W. 1997. Relationship between genetic distance among parents and genetic variance in populations of soybean. Crop Sci. 37: 1317-1325.
19. Li, Y., Hill, C.B., Carlson, S.R., Diers, B.W., and Hartman, G.L. 2007. Soybean aphid resistance in the soybean cultivars Dowling and Jackson map to linkage group M. Mol. Breed. 19: 25-34. 10.1007/s11032-006-9039-9
20. Mensah, C., DiFonzo, C., Nelson, R.L., and Wang, D. 2005. Resistance to soybean aphid in early maturing soybean germplasm. Crop Sci. 45: 2228-2233. 10.2135/cropsci2004.0680
21. Mensah, C., DiFonzo, C., and Wang, D. 2006. Inheritance of soybean aphid resistance in PI 567541B and PI 567598B. In Proceedings of the ASA-CSSA-SSSA, 12-16 November 2006, Indianapolis, Ind. ASA-CSSA-SSSA, Madison, Wis.
22. Nei, M. 1987. Molecular evolutionary genetics. Columbia University Press, New York.
23. Nichols, D.M., Wang, L., Pei, Y., Glover, K.D., and Diers, B.W. 2007. Variability among Chinese Glycine soja and Chinese and North American soybean genotypes. Crop Sci. 47: 1289-1298.
24. Pedersen, P. 2006. Agronomic impact of the soybean aphid [online]. Available from http://extension.agron.iastate.edu/soybean/diseases- aphidsagronomic.html [accessed 17 September 2007].
25. Pilcher, C., Rice, M.E., and Vagts, T. 2005. Economic impact of soybean aphid. Integrated Crop Management Newsletter IC-494. Iowa State University Extension. p. 2.
26. Plant Health Initiative. 2007. Soybean aphid distribution [online]. Available from http://planthealth.info/aphids-dist.htm [accessed 17 September 2007].
27. Reif, J.C., Melchinger, A.E., Xia, X.C., Warburton, M.L., Hoisington, D.A., Vasal, S.K., et al. 2003. Genetic distance based on simple sequence repeats and heterosis in tropical maize populations. Crop Sci. 43: 1275-1282.
28. SAS Institute Inc. 1999. SAS/STAT user's guide. Version 8.0. 1st ed. SAS Institute Inc., Cary, N.C.
29. Shepard, R.N. 1974. Representation of structure in similarity data: problems and prospects. Psychometrika, 39: 373-421.
30. Song, Q.J., Marek, L.F., Shoemaker, R.C., Lark, K.G., Concibido, V.C., Delannay, X., et al. 2004. A new integrated genetic linkage map of soybean. Theor. Appl. Genet. 109: 122-128. 10.1007/s00122-004-1602-3 14991109
31. Sun, Z.Q., Tian, P.Z., and Wang, J. 1991. Utilization of aphid resistant character in wild soybean. I. Aphid resistant performance of F2. Soybean Sci. 10: 98-103.
32. USDA-ARS. 2007. National plant germplasm system [online]. Available from http://www.ars-grin.gov/npgs/index.html [accessed 17 September 2007].
33. Wang, D., Shi, J., Carlson, S.R., Cregan, P.B., Ward, R.W., and Diers, B.W. 2003. A low-cost and high-throughput system for high-resolution genotyping with microsatellite DNA markers. Crop Sci. 43: 1828-1832.
34. Yue, D.R., Guo, S.G., and Shan, Y.L. 1988. Preliminary report on evaluation technique and method of soybean aphid resistance on the wild soybean. Jilin Agric. Sci. 3: 1-3.
35. Yue, D.R., Guo, S.G., and Shan, Y.L. 1989. Resistance of wild soybean Glycine soja to Aphis glycines. I. Screening for resistant varieties. Jilin Agric. Sci. 3: 15-19.
36. Zhang, D.P., Cervantes, J., Huaman, Z., Carey, E., and Ghislain, M. 2004. Assessing genetic diversity of sweet potato (Ipomoea batatas (L.) Lam.) cultivars from tropical America using AFLP. Genet. Resour. Crop Evol. 47: 659-665.