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Volumn 8, Issue 1, 2008, Pages

The origin of a novel gene through overprinting in Escherichia coli

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SEQUENCE; ARTICLE; ESCHERICHIA COLI; EVOLUTIONARY RATE; GENE; GENE SEQUENCE; GENETIC ANALYSIS; GENETIC LINKAGE; GENOMICS; HEAT SHOCK; OPEN READING FRAME; POINT MUTATION; PROKARYOTE; SEQUENCE HOMOLOGY; SHIGELLA; VIRUS; BACTERIAL GENE; CLASSIFICATION; GENETICS; MOLECULAR EVOLUTION; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY;

EID: 40949139328     PISSN: None     EISSN: 14712148     Source Type: Journal    
DOI: 10.1186/1471-2148-8-31     Document Type: Article
Times cited : (40)

References (35)
  • 1
    • 0030660580 scopus 로고    scopus 로고
    • Gene families: The taxonomy of protein paralogs and chimeras
    • 10.1126/science.278.5338.609. 9381171
    • Gene families: the taxonomy of protein paralogs and chimeras. S Henikoff EA Greene S Pietrokovski P Bork TK Attwood L Hood, Science 1997 278 609 614 10.1126/science.278.5338.609 9381171
    • (1997) Science , vol.278 , pp. 609-614
    • Henikoff, S.1    Greene, E.A.2    Pietrokovski, S.3    Bork, P.4    Attwood, T.K.5    Hood, L.6
  • 4
    • 0026722407 scopus 로고
    • Origins of genes: "big bang" or continuous creation?
    • 1329098. 10.1073/pnas.89.20.9489
    • Origins of genes: "big bang" or continuous creation? PK Keese A Gibbs, Proc Natl Acad Sci USA 1992 89 9489 9493 1329098 10.1073/pnas.89.20.9489
    • (1992) Proc Natl Acad Sci USA , vol.89 , pp. 9489-9493
    • Keese, P.K.1    Gibbs, A.2
  • 6
    • 0017798436 scopus 로고
    • Evolution of overlapping genes
    • 10.1038/272532a0. 692657
    • Evolution of overlapping genes. T Miyata T Yasunaga, Nature 1978 272 532 535 10.1038/272532a0 692657
    • (1978) Nature , vol.272 , pp. 532-535
    • Miyata, T.1    Yasunaga, T.2
  • 7
    • 0033926304 scopus 로고    scopus 로고
    • Stability and evolution of overlapping genes
    • 10937248
    • Stability and evolution of overlapping genes. DC Krakauer, Evolution 2000 54 731 739 10937248
    • (2000) Evolution , vol.54 , pp. 731-739
    • Krakauer, D.C.1
  • 8
    • 33645539406 scopus 로고    scopus 로고
    • Origin and evolution of overlapping genes in the family Microviridae
    • 10.1099/vir.0.81375-0. 16528052
    • Origin and evolution of overlapping genes in the family Microviridae. A Pavesi, J Gen Virol 2006 87 1013 1017 10.1099/vir.0.81375-0 16528052
    • (2006) J Gen Virol , vol.87 , pp. 1013-1017
    • Pavesi, A.1
  • 9
    • 8744308029 scopus 로고    scopus 로고
    • Properties of overlapping genes are conserved across microbial genomes
    • 15520290. 10.1101/gr.2433104
    • Properties of overlapping genes are conserved across microbial genomes. ZI Johnson SW Chisholm, Genome Res 2004 14 2268 2272 15520290 10.1101/gr.2433104
    • (2004) Genome Res , vol.14 , pp. 2268-2272
    • Johnson, Z.I.1    Chisholm, S.W.2
  • 10
    • 0033561022 scopus 로고    scopus 로고
    • Comparative study of overlapping genes in the genomes of Mycoplasma genitalium and Mycomplasma pneumoniae
    • 10101192. 10.1093/nar/27.8.1847
    • Comparative study of overlapping genes in the genomes of Mycoplasma genitalium and Mycomplasma pneumoniae. Y Fukuda T Washio M Tomita, Nucleic Acids Res 1999 27 1847 1853 10101192 10.1093/nar/27.8.1847
    • (1999) Nucleic Acids Res , vol.27 , pp. 1847-1853
    • Fukuda, Y.1    Washio, T.2    Tomita, M.3
  • 11
    • 0345490693 scopus 로고    scopus 로고
    • On dynamics of overlapping genes in bacterial genomes
    • 10.1016/j.gene.2003.09.021. 14659892
    • On dynamics of overlapping genes in bacterial genomes. Y Fukuda Y Nakayama M Tomita, Gene 2003 323 181 187 10.1016/j.gene.2003.09.021 14659892
    • (2003) Gene , vol.323 , pp. 181-187
    • Fukuda, Y.1    Nakayama, Y.2    Tomita, M.3
  • 12
    • 19544372124 scopus 로고    scopus 로고
    • Comparative study of overlapping genes in bacteria, with special reference to Rickettsia prowazekii and Rickettsia conorii
    • 10.1099/ijs.0.63446-0. 15879256
    • Comparative study of overlapping genes in bacteria, with special reference to Rickettsia prowazekii and Rickettsia conorii. KR Sakharkar MK Sakharkar Ch Verma TTK Chow, Int J Syst Evol Microbiol 2005 55 1205 1209 10.1099/ijs.0.63446-0 15879256
    • (2005) Int J Syst Evol Microbiol , vol.55 , pp. 1205-1209
    • Sakharkar, K.R.1    Sakharkar, M.K.2    Verma, C.3    Chow, T.T.K.4
  • 13
    • 0022760932 scopus 로고
    • Two overlapping genes in bovine mitochondrial DNA encode membrane components of ATP synthase
    • 2875870
    • Two overlapping genes in bovine mitochondrial DNA encode membrane components of ATP synthase. IM Fearnley JE Walker, EMBO J 1986 5 2003 2008 2875870
    • (1986) EMBO J , vol.5 , pp. 2003-2008
    • Fearnley, I.M.1    Walker, J.E.2
  • 14
    • 0027229503 scopus 로고
    • The Escherichia coli Heat Shock Gene htpY: Mutational Analysis, Cloning, Sequencing, and Transcriptional Regulation
    • 8478327
    • The Escherichia coli Heat Shock Gene htpY: Mutational Analysis, Cloning, Sequencing, and Transcriptional Regulation. D Missiakas C Georgopoulos S Raina, J Bacteriol 1993 175 2613 2624 8478327
    • (1993) J Bacteriol , vol.175 , pp. 2613-2624
    • Missiakas, D.1    Georgopoulos, C.2    Raina, S.3
  • 15
    • 0027415420 scopus 로고
    • Sequence of the Schizosaccharomyces pombe gtp1 gene and identification of a novel family of putative GTP-binding proteins
    • 10.1016/0378-1119(93)90327-Y. 8462872
    • Sequence of the Schizosaccharomyces pombe gtp1 gene and identification of a novel family of putative GTP-binding proteins. JD Hudson PG Young, Gene 1993 125 191 193 10.1016/0378-1119(93)90327-Y 8462872
    • (1993) Gene , vol.125 , pp. 191-193
    • Hudson, J.D.1    Young, P.G.2
  • 16
    • 0027453388 scopus 로고
    • Simple methods for testing molecular clock hypothesis
    • 8244016
    • Simple methods for testing molecular clock hypothesis. F Tajima, Genetics 1993 135 599 607 8244016
    • (1993) Genetics , vol.135 , pp. 599-607
    • Tajima, F.1
  • 17
    • 0034178257 scopus 로고    scopus 로고
    • Homology a personal view on some of the problems
    • 10.1016/S0168-9525(00)02005-9. 10782117
    • Homology a personal view on some of the problems. WM Fitch, Trends Genet 2000 16 227 231 10.1016/S0168-9525(00)02005-9 10782117
    • (2000) Trends Genet , vol.16 , pp. 227-231
    • Fitch, W.M.1
  • 18
    • 0028538351 scopus 로고
    • Which is the Most Conserved Group of Proteins? Homology-Orthology, Paralogy, Xenology, and the Fusion of Independent Lineages
    • 10.1007/BF00173425. 7807544
    • Which is the Most Conserved Group of Proteins? Homology-Orthology, Paralogy, Xenology, and the Fusion of Independent Lineages. JP Gogarten, J Mol Evol 1994 39 541 543 10.1007/BF00173425 7807544
    • (1994) J Mol Evol , vol.39 , pp. 541-543
    • Gogarten, J.P.1
  • 19
    • 0027905006 scopus 로고
    • Natural selection and the origin of jingwei, a chimeric processed functional gene in Drosophila
    • 10.1126/science.7682012. 7682012
    • Natural selection and the origin of jingwei, a chimeric processed functional gene in Drosophila. M Long CH Langley, Science 1993 260 91 95 10.1126/science.7682012 7682012
    • (1993) Science , vol.260 , pp. 91-95
    • Long, M.1    Langley, C.H.2
  • 20
    • 0037007062 scopus 로고    scopus 로고
    • Origin of sphinx, a young chimeric RNA in Drosophila melanogaster
    • 11904380. 10.1073/pnas.072066399
    • Origin of sphinx, a young chimeric RNA in Drosophila melanogaster. W Wang FG Brunet E Nevo M Long, Proc Natl Acad Sci USA 2002 99 4448 4453 11904380 10.1073/pnas.072066399
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 4448-4453
    • Wang, W.1    Brunet, F.G.2    Nevo, E.3    Long, M.4
  • 22
    • 33745618956 scopus 로고    scopus 로고
    • Regulon and promoter analysis of the E. coli heat-shock factor, sigma32, reveals a multifaceted cellular response to heat stress
    • 16818608. 10.1101/gad.1428206
    • Regulon and promoter analysis of the E. coli heat-shock factor, sigma32, reveals a multifaceted cellular response to heat stress. G Nonaka M Blankschien C Herman CA Gross VA Rhodius, Genes Dev 2006 20 1776 1789 16818608 10.1101/gad.1428206
    • (2006) Genes Dev , vol.20 , pp. 1776-1789
    • Nonaka, G.1    Blankschien, M.2    Herman, C.3    Gross, C.A.4    Rhodius, V.A.5
  • 31
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice
    • 7984417. 10.1093/nar/22.22.4673
    • CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice. JD Thompson DG Higgins TJ Gibson, Nucleic Acids Res 1994 22 4673 4680 7984417 10.1093/nar/22.22.4673
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 32
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. TA Hall, Nucl Acids Symp Ser 1999 41 95 98
    • (1999) Nucl Acids Symp Ser , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 33
    • 1342288004 scopus 로고    scopus 로고
    • The Jalview Aligment aEditor
    • 10.1093/bioinformatics/btg430
    • The Jalview Aligment aEditor. M Clamp J Cuff SM Searle GJ Barton, Bioinformatics 2004 12 426 427 10.1093/bioinformatics/btg430
    • (2004) Bioinformatics , vol.12 , pp. 426-427
    • Clamp, M.1    Cuff, J.2    Searle, S.M.3    Barton, G.J.4
  • 34
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment
    • 10.1093/bib/5.2.150. 15260895
    • MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment. S Kumar K Tamura M Nei, Brief Bioinform 2004 5 150 163 10.1093/bib/5.2.150 15260895
    • (2004) Brief Bioinform , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 35
    • 0022507362 scopus 로고
    • Simple methods for estimating the number of synonymous and nonsynonymous nucleotide substitutions
    • 3444411
    • Simple methods for estimating the number of synonymous and nonsynonymous nucleotide substitutions. M Nei T Gojobori, Mol Biol Evol 1986 3 418 426 3444411
    • (1986) Mol Biol Evol , vol.3 , pp. 418-426
    • Nei, M.1    Gojobori, T.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.