Recombinant Sabin environmental isolates in Greece and Cyprus

Journal of Applied Microbiology

Volumn 104, Issue 4, 2008, Pages 1153-1162

  Paximadi, E ^a   Karakasiliotis, I ^b   Papaventsis, D ^a   Papageorgiou, G ^c   Markoulatos, P ^a  

^a UNIVERSITY OF THESSALY   (Greece)

^b IMPERIAL COLLEGE LONDON   (United Kingdom)

^c State General Laboratory of Cyprus   (Cyprus)

Author keywords

Polioviruses; Recombinant; RT PCR; Sequencing; Sewages

Indexed keywords

SEWAGE TREATMENT PLANTS;

ENVIRONMENTAL ISOLATES; GENOMICS; POLIO VIRUS; RECOMBINANT; RECOMBINATION EVENTS; RT-PCR; SEQUENCING; SEWAGE-TREATMENT PLANTS; TIME-PERIODS; VACCINE DERIVED POLIOVIRUSES;

HEALTH RISKS;

ORAL POLIOMYELITIS VACCINE; RECOMBINANT VACCINE;

ENVIRONMENTAL AUDITING; HYBRID; POLIOMYELITIS; POLYMERASE CHAIN REACTION; PROTEIN; PUBLIC HEALTH; RECOMBINATION; SEWAGE TREATMENT; VACCINE; VIRUS PARTICLE;

ARTICLE; CONTROLLED STUDY; CYPRUS; ENVIRONMENTAL FACTOR; GENOME; GREECE; NONHUMAN; NUCLEOTIDE SEQUENCE; POLIOMYELITIS VIRUS; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; VIRUS ISOLATION; VIRUS RECOMBINATION;

ASIA; ATHENS [ATTICA]; ATTICA; CYPRUS; EURASIA; EUROPE; GREECE; LIMASSOL; MIDDLE EAST; NICOSIA [CYPRUS]; SOUTHERN EUROPE;

EID: 40849124153     PISSN: 13645072     EISSN: 13652672     Source Type: Journal    
DOI: 10.1111/j.1365-2672.2007.03649.x     Document Type: Article

References (44)

1. Alexander, J.P. Jr., Gary, H.E. Jr. Pallansch, M.A. (1997) Duration of poliovirus excretion and its implications for acute flaccid paralysis surveillance: a review of the literature. J Infect Dis 175, 176 182.
2. Blomqvist, S., Bruu, A.L., Stenvik, M. Hovi, T. (2003) Characterization of a recombinant type 3/type 2 poliovirus isolated from a healthy vaccine and containing a chimeric capsid protein VP1. J Gen Virol 84, 573 580.
3. Blomqvist, S., Savolainen, C.P., Laine, P., Hirttiö, E., Lamminsalo, E., Penttilä, S., Jöks, Roivainen, M. Hovi, T. (2004) Characterization of a highly evolved vaccine-derived poliovirus type 3 isolated from sewage in Estonia. J Virol 78, 4876 4883.
4. Brown, B., Oberste, S., Maher, K. Pallansch, M. (2003) Complete genomic sequencing shows that polioviruses and members of human enterovirus species C are closely related in the noncapsid coding region. J Virol 77, 8973 8984.
5. Casas, I., Powell, L., Klapper, P.E. Cleator, G.M. (1996) New method for the extraction of viral RNA and DNA from cerebrospinal fluid for use in the polymerase chain reaction assay. J Virol Methods 5, 525 536.
6. Centers for Disease Control and Prevention (2001) Acute flaccid paralysis associated with circulating vaccine-derived poliovirus - Philippines, 2001. Morb Mortal Wkly Rep 50, 874 875.
7. Centers for Disease Control and Prevention (2002) Poliomyelitis - Madagascar, 2002. Morb Mortal Wkly Rep 51, 622.
8. Cherkasova, E., Korotkova, E., Yakovenko, M., Ivanova, O., Eremeeva, T., Chumakov, K. Agol, V. (2002) Long-term circulation of vaccine-derived poliovirus that causes paralytic disease. J Virol 76, 6791 6799.
9. Chumakov, K.M., Norwood, L.P., Parker, M.L., Dragunsky, E.M., Ran, Y.X. Levenbook, I.S. (1992) RNA sequence variants in live poliovirus vaccine and their relation to neurovirulence. J Virol 66, 966 970.
10. Cochi, S.L., Hull, H.F. Ward, N.A. (1995) To conquer poliomyelitis forever. Lancet 345, 1589 1590.
11. Cuervo, N.S., Guillot, S., Romanenkova, N., Combiescu, M., Aubert-Combiescu, A., Seghier, M., Caro, V., Crainic, R., et al. (2001) Genomic features of intertypic recombinant Sabin poliovirus strains excreted by primary vaccines. J Virol 75, 5740 5751.
12. Dahourou, G., Guillot, S., Le-Gall, O. Crainic, R. (2002) Genetic recombination in wildtype poliovirus. J Gen Virol 83, 3103 3110.
13. Diamanti, E., Ibrahimi, B., Tafaj, F., Mezini, E., Dodbiba, A., Dobi, V., Catone, S., Genovese, D., et al. (1998) Surveillance of suspected poliomyelitis in Albania, 1980-1995: suggestion of increased risk of vaccine associated poliomyelitis. Vaccine 16, 940 948.
14. Divizia, M., Palombi, L., Buonomo, E., Donia, D., Ruscio, V., Equestre, M., Leno, L., Pana, A., et al. (1999) Genomic characterization of human and environmental polioviruses isolated in Albania. Appl Environ Microbiol 65, 3534 3539.
15. Fiore, L., Genovese, D., Diamanti, E., Catone, S., Ridolfi, B., Ibrahimi, B., Konomi, R., van der Avoort, H.G., et al. (1998) Antigenic and molecular characterization of wild type 1 poliovirus causing outbreaks of poliomyelitis in Albania and neighbouring countries in 1996. J Clin Microbiol 36, 112 118.
16. Georgescu, M.M., Delpeyroux, F. Crainic, R. (1995) Tripartite genome organization of a natural type 2 vaccine/nonvaccine recombinant poliovirus. J Gen Virol 76, 2343 2348.
17. Georgopoulou, A., Markoulatos, P., Spyrou, N. Vamvakopoulos, N.C. (2000) Improved genotyping of vaccine and wild type poliovirus strains by restriction fragment length polymorphism analysis: clinical diagnostic implications. J Clin Microbiol 141, 1047 1054.
18. Georgopoulou, A. Markoulatos, P. (2001) Sabin type 2 polioviruses with intertypic vaccine/vaccine recombinant genomes. Eur J Clin Microbiol Infect Dis 20, 792 799.
19. Grabow, W.O., Botma, K.L., de Villiers, J.C., Clay, C.G. Erasmus, B. (1999) Assessment of cell culture and polymerase chain reaction procedures for the detection of polioviruses in wastewater. Bull World Health Organ 77, 973 980.
20. Hovi, T., Stevnik, M., Partanen, H. Kangas, A. (2001) Poliovirus surveillance by examining sewage specimens: quantitative recovery of virus after introduction into sewerage at remote upstream location. Epidimiol Infect 127, 101 106.
21. Karakasiliotis, I., Markoulatos, P. Katsorchis, T. (2004) Site analysis of recombinant and mutant poliovirus isolates of Sabin origin from patients and from vaccinees. Mol Cell Probes 18, 103 109.
22. Kew, O.M., Sutter, R.W., Nottay, B.K., McDonough, M.J., Prevots, D.R., Quick, L. Pallansch, M.A. (1998) Prolonged replication of a type 1 vaccine-derived poliovirus in an immunodeficient patient. J Clin Microbiol 36, 2893 2899.
23. Kew, O., Morris-Glasgow, V., Landaverde, M., Burns, C., Shaw, J., Garib, Z., et al. (2002) Outbreak of poliomyelitis in Hispaniola associated with circulating type 1 vaccine-derived poliovirus. Science 296, 356 359.
24. Kyriakopoulou, Z., Kottaridi, C., Dedepsidis, E., Bolanaki, E., Levidiotou-Stefanou, S. Markoulatos, P. (2006) Molecular characterization of wild-type polioviruses isolated in Greece during the 1996 outbreak in Albania. J Clin Microbiol 44, 1150 1152.
25. Liu, H.M., Zheng, D.P., Zhang, L.B., Oberste, M.S., Palansch, M.A. Kew, O.M. (2000) Molecular evolution of a type 1 wild-vaccine poliovirus recombinant during widespread circulation in China. J Virol 74, 11153 11161.
26. Manor, Y., Handsher, R., Halmut, T., Neuman, M., Bobrov, A., Rudich, H., Vonsoner, A., Shulman, L., Kew, O. Mendelson, E. (1999) Detection of poliovirus circulation by environmental surveillance in the absence of clinical cases in Israel and the Palestinian authority. J Clin Microbiol 37, 1670 1675.
27. Martin, J., Dunn, G., Hull, R., Patel, V. Minor, P.D. (2000) Evolution of the sabin strain of type 3 poliovirus in an immunodeficient patient during the entire 637-day period of virus excretion. J Virol 74, 3001 3010.
28. Martin, J., Samoilovich, E., Dunn, G., Lackenby, A., Feldman, E., Heath, A., Svirchevskaya, E., Cooper, G., et al. (2002) Isolation of an intertypic poliovirus capsid recombinant from a child with vaccine-associated paralytic poliomyelitis. J Virol 76, 10921 10928.
29. Marturano, J. Fiore, L. (2002) Investigation of the presence of recombinant polioviruses in the hit population in Albania during the 1996 outbreak. J Clin Microbiol 40, 316 317.
30. Metcalf, T., Melnick, G.J.L. Estes, M.K. (1995) Environmental virology: from detection of virus in sewage and water by isolation to identification by molecular biology - a trip of over 50 years. Annu Rev Microbiol 49, 461 487.
31. Mocé-Llivina, L., Jofre, J., Méndez, X., Akkelidou, D., Lucena, F. Papageorgiou, G.T. (2002) Counting cytopathogenic virus adsorbed to cellulose nitrate membrane filters as a simple method for counting viruses in raw sewage and sewage effluents. J Virol Methods 102, 83 92.
32. Omata, T., Kohara, M., Kuge, S., Komatsu, T., Abe, S., Semler, B.L., Kameda, A., Itoh, H., et al. (1986) Genetic analysis of the attenuation phenotype of poliovirus type 1. J Virol 58, 348 358.
33. Paximadi, E., Karakasiliotis, I., Mamuris, Z., Stathopoulos, C., Krikelis, V. Markoulatos, P. (2006) Genomic analysis of recombinant sabin clinical isolates. Virus Genes 32, 203 210.
34. Papageorgiou, G.T., Mocé-Llivina, L., Christodoulou, C.G., Lucena, F., Akkelidou, D., Ioannou, E. Jofre, J. (2000) A simple methodological approach for counting and identifying cytopathogenic viruses adsorbed to cellulose nitrate membrane filters. Appl Environ Microbiol 66, 194 198.
35. Papaventsis, D., Siafakas, N., Markoulatos, P., Papageorgiou, G.T., Kourtis, C., Chatzichristou, E., Economou, C. Levidiotou, S. (2005) Membrane adsorption with direct cell culture combined with reverse transcription-PCR as a fast method for identifying enteroviruses from sewage. Appl Environ Microbiol 71, 72 79.
36. Reynolds, K.A., Gerba, C.P. Pepper, I.L. (1996) Detection of infectious enteroviruses by an integrated cell culture-PCR procedure. Appl Environ Microbiol 62, 1424 1427.
37. Rusin, P., Enriquez, C., Johnson, D. Gerba, C. (2000) Enteric viruses. In Environmental Microbiology ed. Maier, R., Pepper, I. Gerba, C. 1st edn. pp. 472 484. London : Academic Press.
38. Sabin, A.B. (1965) Oral poliovirus vaccine. History of its development and prospects for eradication of poliomyelitis. JAMA 194, 872 876.
39. Sedmak, G., Bina, D. MacDonald, J. (2003) Assessment of an enterovirus sewage surveillance system by comparison of clinical isolates with sewage isolates from Milwaukee, Wisconsin, collected from August 1994 to December 2002. Appl Environ Microbiol 69, 7181 7187.
40. Shulman, L.M., Manor, Y., Handsher, R., Delpeyroux, F., McDonough, M.J., Halmut, T., Silberstein, I., Alfandari, J., et al. (2000) Molecular and antigenic characterization of a highly evolved derivative of the type 2 oral-polio vaccine strain isolated from sewage in Israel. J Clin Microbiol 38, 3729 3734.
41. Stanway, G., Brown, F., Christian, P., Hovi, T., Hyypiä, T., King, A.M.Q., Knowles, N.J., Lemon, S.M. et al. (2005) Picornaviridae. In Virus Taxonomy, 8th Report of the ICTV ed. Fauquet, C.M., Mayo, M.A., Maniloff, U., Desselberger, U. Ball, L.A. pp. 757 758. London : Elsevier/Academic Press.
42. Yang, C.F., Naguib, T., Yang, S.J., Nasr, E., Jorba, J., Ahmed, N., Campagnoli, R., van der Avoort, H., et al. (2003) Circulation of endemic type 2 vaccine-derived poliovirus in Egypt from 1983 to 1993. J Virol 77, 8366 8377.
43. Yoshida, H., Horie, H., Matsuura, K. Miyamura, T. (2000) Characterisation of vaccine-derived polioviruses isolated from sewage and river water in Japan. Lancet 356, 1461 1463.
44. Yoshida, H., Horie, H., Matsuura, K., Kitamura, T., Hashizume, S. Miyamura, T. (2002) Prevalence of vaccine-derived polioviruses in the environment. J Gen Virol 83, 1107 1111.