Novel x-type high-molecular-weight glutenin genes from Aegilops tauschii and their implications on the wheat origin and evolution mechanism of Glu-D1-1 proteins

Genetics

Volumn 178, Issue 1, 2008, Pages 23-33

  Zhang, Yanzhen ^a   Li, Xiaohui ^a   Wang, Aili ^a   An, Xueli ^a   Zhang, Qian ^a,b   Pei, Yuhe ^a   Gao, Liyan ^a   Ma, Wujun ^b   Appels, Rudi ^b   Yan, Yueming ^a  

^a CAPITAL NORMAL UNIVERSITY   (China)

^b MURDOCH UNIVERSITY   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

GLUTAMATE AMMONIA LIGASE; GLUTENIN; PROTEIN GLU D1 1; PROTEIN SUBUNIT; UNCLASSIFIED DRUG;

AEGILOPS TAUSCHII; ALLELE; AMINO ACID SEQUENCE; ARTICLE; CONTROLLED STUDY; ESCHERICHIA COLI; GENE IDENTIFICATION; GENE SEQUENCE; GENE STRUCTURE; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; MOLECULAR WEIGHT; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; POLYACRYLAMIDE GEL ELECTROPHORESIS; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PROTEIN MOTIF; REVERSED PHASE HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; SINGLE NUCLEOTIDE POLYMORPHISM; STRUCTURE ANALYSIS; WHEAT;

AMINO ACID SEQUENCE; BASE SEQUENCE; CLONING, MOLECULAR; ESCHERICHIA COLI; EVOLUTION; GENE DELETION; GENES, PLANT; GENETIC VECTORS; GLUTEN; MOLECULAR SEQUENCE DATA; MOLECULAR WEIGHT; OPEN READING FRAMES; PHYLOGENY; PLANT PROTEINS; POLYMORPHISM, SINGLE NUCLEOTIDE; PROTEIN SUBUNITS; TRITICUM;

AEGILOPS TAUSCHII; TRITICUM AESTIVUM;

EID: 40849115171     PISSN: 00166731     EISSN: 00166731     Source Type: Journal    
DOI: 10.1534/genetics.107.077412     Document Type: Article

References (47)

1. ALBERGHINA, G., R. COZZOLINO, S. FISICHELLA, D. GAROZZO and A. SAVARINO, 2005 Proteomics of gluten: mapping of the 1Bx7 glutenin subunit in Chinese Spring cultivar by matrix-assisted laser desorption/ionization. Rapid Commun. Mass Spectrom. 19: 2069-2074.
2. ALLABY, R. G., and T. A. BROWN, 2001 Network analysis provides insights into evolution of 5S rDNA arrays in Triticum and Aegilops. Genetics 157: 1331-1341.
3. ALLABY, R. G., M. BANERJEE and T. A. BROWN, 1999 Evolution of the high molecular weight glutenin loci of the A, B, D and G genomes of wheat. Genome 42: 296-307.
4. ALTENBACH, S. B., 1998 Quantification of individual low-molecular-weight glutenin subunit transcripts in developing wheat grains by competitive RT-PCR. Theor. Appl. Genet. 97: 413-421.
5. ANDERSON, O. D., and F. C. GREENE, 1989 The characterization and comparative analysis of HMW glutenin genes from genomes A and B of hexaploid bread wheat. Theor. Appl. Genet. 77: 689-700.
6. ANDERSON, O. D., F. C. GREENE, R. E. YIP, N. G. HALFORD, P. R. SHEWRY et al., 1989 Nucleotide sequences of the two high-molecular-weight glutenin genes from the D-genome of a hexaploid bread wheat, Triticum aestivum L. cv Cheyenne. Nucleic Acids Res. 17: 461-462.
7. ANDERSON, O. D., C. RAUSCH, O. MOULLET and W. S. LAGUDAH, 2003 The wheat D-genome HMW-glutenin locus: BAC sequencing, gene distribution, and retrotransposon clusters. Funct. Integr. Genomics 3: 56-68.
8. ANDREWS, J. L., R. L. HAY, J. H. SKERRITT and H. SUTTON, 1994 HPLC and immunoassay-based glutenin subunit analysis: screening for dough properties in wheats grown under different environmental conditions. J. Cereal Sci. 20: 203-215.
9. BLATTER, R. H. E., S. JACOMET and A. SCHLUMBAUM, 2004 About the origin of European spelt (Triticum spelta L.): allelic differentiation of the HMW glutenin B1-1 and A1-2 subunit genes. Theor. Appl. Genet. 108: 360-367.
10. CALDWELL, K. S., J. DVORAK, E. S. LAGUDAH, E. AKHUNOV, M. C. LUO et al., 2004 Sequence polymorphism in polyploidy wheat and their D-genome ancestor. Genetics 167: 941-947.
11. COZZOLINO, R., G. S. DI, S. FISICHELLA, D. GAROZZO, D. LAFIANDRA et al., 2001 Matrix-assisted laser desorption/ionization mass spectrometric peptide mapping of high molecular weight glutenin subunits 1Bx7 and 1Dy10 in Cheyenne cultivar. Rapid Commun. Mass Spectrom. 15: 778-787.
12. CUNSOLO, V., S. FOTI, R. SALETTI, S. GILBERT, A. S. TATHAM et al., 2004 Structural studies of the allelic wheat glutenin subunits 1Bx7 and 1Bx20 by matrix-assisted laser desorption/ionization mass spectrometry and high-performance liquid chromatography/ electrospray ionization mass spectrometry. J. Mass Spectrom. 39: 66-78.
13. DEVOS, K. M., J. K. M. BROWN and J. L. BENNETZEN, 2002 Genome size reduction through illegitimate recombination counteracts genome expansion in Arabidopsis. Genome Res. 12: 1075-1079.
14. D'OVIDIO, R., D. LAFIANDRA and E. PORCEDDU, 1996 Identification and molecular characterization of a large insertion within the repetitive domain of a high-molecular-weight glutenin subunit gene from hexaploid wheat. Theor. Appl. Genet. 93: 1048-1053.
15. DVORAK, J., M. C. LUO, Z. L. YANG and H. B. ZHANG, 1998 The structure of the Aegilops tauschii genepool and the evolution of hexaploid wheat. Theor. Appl. Genet. 97: 657-670.
16. GIANIBELLI, M. C., M. ECHAIDE, O. R. LARROQUE, J. M. CARILLO and J. DUBCOVSKY, 2002 Biochemical and molecular characterisation of Glu-1 loci in Argentinian wheat cultivars. Euphytica 128: 61-73.
17. GILES, R. J., and T. A. BROWN, 2006 GluDy allele variations in Aegilops tauchii and Triticum aestivum: implications for the origins of hexaploid wheat. Theor. Appl. Genet. 112: 1563-1572.
18. GOLDSBROUGH, A. P., N. J. BULLEID, R. B. FREEDMAN and R. B. FLAVELL, 1989 Conformational differences between two wheat (Triticum aestivum) 'high-molecular-weight' glutenin subunits are due to a short region containing six amino acid differences. Biochem. J. 263: 837-842.
19. GU, Y. Q., C. D. DEVIN, X. Y. KONG and O. D. ANDERSON, 2004 Rapid genome evolution revealed by comparative sequence analysis of orthologous regions from four Triticeae genomes. Plant Physiol. 135: 459-470.
20. HICKMAN, D. R., P. ROEPSTORFF, P. R. SHEWRY and A. S. TATHAM, 1995 Molecular weights of high molecular weight subunits of glutenin determined by mass spectrometry. J. Cereal Sci. 22: 99-103.
21. HUANG, S., A. SIRIKHACHORNKIT, X. J. SU, J. FARIS, B. GILL et al., 2002 Genes encoding plastid acetyl-CoaA carboxylase and 3-phosphoglycerate kinase of the Triticum/Aegilops complex and evolutionary history of polyploid wheat. Proc. Natl. Acad. Sci. USA 99: 8133-8138.
22. LAGUDAH, E. S., and G. M. HALLORAN, 1988 Phylogenetic relationships of Triticum tauschii the D genome donor to hexaploid wheat. 1. Variation in HMW subunits of glutenin and gliadin. Theor. Appl. Genet. 75: 592-598.
23. LELLEY, T., M. STACHEL, H. GRAUSGRUBER and J. VOLLMANN, 2000 Analysis of relationships between Ae. tauschii and the D genome of wheat utilizing microsatellite. Genome 43: 661-668.
24. LI, W., Y. WAN, Z. LIU, K. LIU, B. LI et al., 2004 Molecular charaterization of HMW glutenin subunit allele 1Bx14: further insights into the evolution of Glu-B1-1 alleles in wheat and related species. Theor. Appl. Genet. 109: 1093-1104.
25. MA, W., R. APPELS, F. BEKES, O. LARROQUE, M. K. MORELL et al., 2005 Genetic characterisation of dough rheological properties in a wheat doubled haploid population: additive genetic effects and epistatic interactions. Theor. Appl. Genet. 111: 410-422.
26. MASCI, S., R. D'OVIDIO, D. LAFIANDRA and D. D. KASARDA, 1998 Characterization of a low-molecular-weight glutenin subunit gene from bread wheat and the corresponding protein that represents a major subunit of the glutenin polymers. Plant Physiol. 118: 1147-1158.
27. MCFADDEN, E. S., and E. R. SEARS, 1946a The origin of Triticum spelta and its free-threshing hexaploid relatives. J. Hered. 37: 81-89.
28. MCFADDEN, E. S., and E. R. SEARS, 1946b The origin of Triticum spelta and its free-threshing hexaploid relatives. J. Hered. 37: 107-116.
29. PAYNE, P. I., 1987 Genetics of wheat storage proteins and the effect of allelic variation on bread-making quality. Annu. Rev. Plant Physiol. 38: 141-153.
30. RAZIN, A., and A. D. RIGGS, 1980 DNA methylation and gene function. Science 210: 604-610.
31. SHEWRY, P. R., and N. G. HALFORD, 2002 Cereal seed storage proteins: structures, properties and role in grain utilization. J. Exp. Bot. 53: 947-958.
32. SHEWRY, P. R., N. G. HALFORD and A. S. TATHAM, 1992 The high molecular weight subunits of wheat glutenin. J. Cereal Sci. 15: 105-120.
33. SHEWRY, P. R., Y. POPINEAU, D. LAFIANDRA and P. BELTON, 2001 Wheat glutenin subunits and dough elasticity findings of the EUROWHEAT project. Trends Food Sci. Technol. 11: 433-441.
34. SUGIYAMA, T., A. RAFALSKI, D. PETERSON and D. SOL, 1985 A wheat HMW glutenin subunit gene reveals a highly repeated structure. Nucleic Acid Res. 13: 8729-8737.
35. SUN, M. M., Y. M. YAN, Y. JIANG, Y. H. XIAO, Y. K. HU et al., 2004 Molecular cloning and comparative analysis of a y-type inactive HMW glutenin subunit gene from cultivated emmer wheat (Triticum dicoccum L.). Hereditas 141: 46-54.
36. SUN, X., S. HU, X. LIU, W. QIAN, S. HAO et al., 2006 Characterization of the HMW glutenin subunits from Aegilops searsii and identification of a novel variant HMW glutenin subunit. Theor. Appl. Genet. 113: 631-641.
37. TALBERT, L. E., L. Y. SMITH and N. K. BLAKE, 1998 More than one origin of hexaploid wheat is indicated by sequence comparison of low-copy DNA. Genome 41: 402-407.
38. TATHAM, A. S., and P. R. SHEWRY, 1985 The conformation of wheat gluten proteins. The secondary structures and thermal stabilities of alpha-, beta-, gamma- and omega-gliadins. J. Cereal Sci. 3: 103-113.
39. THOMPSON, J. D., D. G. HIGGINS and T. J. GIBSON, 1994 Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22: 4673-4680.
40. WAN, Y., D. WANG, P. R. SHEWRY and N. G. HALFORD, 2002 Isolation and characterization of five novel high molecular weight subunit genes from Triticum timopheevi and Aegilops cylindrica. Theor. Appl. Genet. 104: 828-839.
41. WAN, Y., Z. YAN, K. LIU, Y. ZHENG, R. D'OVIDIO et al., 2005 Comparative analysis of D genome-encoded high-molecular weight subunits of glutenin. Theor. Appl. Genet. 111: 1183-1190.
42. m genomes of wheat. Plant Cell 15: 1186-1197.
43. WRIGLEY, C. W., 1996 Giant proteins with flour power. Nature 381: 738-739.
44. YAN, Y., S. L. K. HSAM, J. Z. YU, Y. JIANG and F. J. ZELLER, 2003a Allelic variation of the HMW glutenin subunits in Aegilops tauschii accessions detected by sodium dodecyl sulphate (SDS-PAGE), acid polyacrylamide gel (A-PAGE) and capillary electrophoresis. Euphytica 130: 377-385.
45. YAN, Y., S. L. K. HSAM, J. YU, Y. JIANG, I. OHTSUKA et al., 2003b HMW and LMW glutenin alleles among putative tetraploid and hexaploid T. spelta progenitors. Theor. Appl. Genet. 107: 1321-1330.
46. t1 glutenin gene of Aegilops tauschii. Theor. Appl. Genet. 108: 1349-1358.
47. t) from Aegilops tauschii. Genome 49: 735-745.