Taxonomy, molecular phylogeny, and ultrastructural morphology of Olpidiopsis porphyrae sp. nov. (Oomycetes, straminipiles), a unicellular obligate endoparasite of Bangia and Porphyra spp. (Bangiales, Rhodophyta)

Mycological Research

Volumn 112, Issue 3, 2008, Pages 361-374

  Sekimoto, Satoshi ^a   Yokoo, Kazunari ^b   Kawamura, Yoshio ^b   Honda, Daiske ^a  

^a KONAN UNIVERSITY   (Japan)

^b Saga Prefeclural Ariake Fisheries Research and Development Center   (Japan)

Author keywords

Algicolous fungi; Group I intron; Holocarpic; Infection; Lagenidiales; Marine algal parasite; Oomycetes; Pathogen; Sporangial development

Indexed keywords

ALGAL DNA; CYCLOOXYGENASE 2; FUNGAL DNA; RIBOSOME DNA; RIBOSOME RNA;

FUNGUS; MITOCHONDRION; MOLECULAR ANALYSIS; MORPHOLOGY; PHYLOGENY; PROTIST; RED ALGA; RNA; TAXONOMY; ULTRASTRUCTURE;

ARTICLE; CLASSIFICATION; DNA SEQUENCE; GENETICS; MICROBIOLOGY; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; OOMYCETES; PHYLOGENY; PHYSIOLOGY; PORPHYRA; SEQUENCE ALIGNMENT; ULTRASTRUCTURE;

CYCLOOXYGENASE 2; DNA, ALGAL; DNA, FUNGAL; DNA, RIBOSOMAL; MOLECULAR SEQUENCE DATA; OOMYCETES; PHYLOGENY; PORPHYRA; RNA, RIBOSOMAL; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA;

ALGAE; BANGIA; BANGIALES; FUNGI; LAGENIDIALES; OLPIDIOPSIS; OOMYCETES; PERONOSPORALES; PORPHYRA; PORPHYRA YEZOENSIS; RHODOPHYTA; SAPROLEGNIA;

EID: 40649120158     PISSN: 09537562     EISSN: 14698102     Source Type: Journal    
DOI: 10.1016/j.mycres.2007.11.002     Document Type: Article

References (57)

1. Adl S.M., Simpson A.G., Farmer M.A., Andersen R.A., Anderson O.R., Barta J.R., Bowser S.S., Brugerolle G., Fensome R.A., Fredericq S., James T.Y., Karpov S., Kugrens P., Krug J., Lane C.E., Lewis L.A., Lodge J., Lynn D.H., Mann D.G., Mccourt R.M., Mendoza L., Moestrup Ø., Mozley-Standridge S.E., Nerad T.A., Shearer C.A., Smirnov A.V., Spiegel F.W., and Taylor M.F. The new higher level classification of eukaryotes with emphasis on the taxonomy of protists. Journal of Eukaryotic Microbiology 52 (2005) 399-451
2. Addepalli M.K., and Fujita Y. Serological detection of red rot disease initiation stages of microbial pathogen, Pythium porphyrae (Oomycota) on Porphyra yezoensis. Journal of Applied Phycology 13 (2001) 219-225
3. Addepalli M.K., Fujita Y., and Kanai K. A monoclonal antibody and the lectin wheat germ agglutinin induce zoospore encystment in Pythium porphyrae, a marine microbial pathogen. Mycologia 94 (2002) 712-722
4. Aleem A.A. Olpidiopsis feldmanni sp. nov., champignon marin parasite d'Algues de la famille des Bonnemaisoniacees. Comptes Rendus Hebdomadaires des Seances de l'Academie des Sciences, Serie D (1952) Paris, pp. 1250-1252
5. Arasaki S. Asakusanori no Fuhai-byou ni kansuru kenkyuu (Studies on the deterioration of Porphyra tenera). Bulletin of the Japanese Society of Scientific Fisheries 13 (1947) 74-90 [In Japanese.]
6. Arasaki S. A chytridean parasite on the Porphyra. Bulletin of the Japanese Society of Scientific Fisheries 26 (1960) 543-548 [In Japanese.]
7. Beakes G.W. Oomycete fungi: their phylogeny and relationship to chromophyte algae. In: Green J.P., Leadbeater B.S.C., and Diver W.L. (Eds). The Chromophyte Algae: Problems and Perspectives (1989), Clarendon Press, Oxford 325-342
8. Bortnick R.N., Powell M.J., and Bangert T.N. Zoospore fine structure of the parasite Olpidiopsis saprolegniae variety saprolegniae (Oomycetes, Lagenidiales). Mycologia 77 (1985) 861-879
9. Broom J.E.S., Farr T.J., and Nelson W.A. Phylogeny of the Bangia flora of New Zealand suggests a southern origin for Porphyra and Bangia (Bangia, Rhodophyta). Molecular Phylogenetics and Evolution 31 (2004) 1197-1207
10. Cejp K. Flora ČSR., B Rada Mykologicko-Lichenologicka. Svazek 2, Oomycetes I (1959), Československe Akademie ved, Prague
11. Cook K.L., Hudspeth D.S.S., and Hudspeth M.E.S. A cox2 phylogeny of representative marine peronosporomycetes (Oomycetes). Nova Hedwigia Beiheft 122 (2001) 231-243
12. Dick M.W. Straminipilous Fungi: Systematics of the Peronosporomycetes, Including Accounts of the Marine Straminipilous Protests, the Plasmodiophorids, and Similar Organisms (2001), Kluwer Academic Publishers, Dordrecht
13. Ding H., and Ma J. Simultaneous infection by red rot and chytrid diseases in Porphyra yezoensis Ueda. Journal of Applied Phycology 17 (2005) 51-56
14. Feldmann J., and Feldmann G. Observations sur quelques Phycomycetes marins nouveaux ou peu connus. Revue de Mycologie 22 (1955) 231-251
15. Feldmann J., and Feldmann G. Le parasitisme d'un Olpidiopsis sur le Radicilingua reptans (Kylin) Papenfuss. Le Botaniste 50 (1967) 189-203
16. Felsenstein J. PHYLIP - Phylogeny Inference Package (Version 3.2). Cladistics 5 (1989) 164-166
17. Fujita Y. Diseases of cultivated Porphyra in Japan. In: Akatsuka I. (Ed). Introduction to Applied Phycology (1990), SPB Academic Publishing, Hague 177-190
18. Hasegawa M., Kishino H., and Yano T. Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. Journal of Molecular Evolution 22 (1985) 160-174
19. Haugen P., Simon D.M., and Bhattacharya D. The natural history of group I introns. Trends in Genetics 21 (2005) 111-119
20. Honda D., Yokochi T., Nakahara T., Raghukumar S., Nakagiri A., Schaumann K., and Higashihara T. Molecular phylogeny of labyrinthulids and thraustochytrids based on the sequencing of 18S ribosomal RNA gene. Journal of Eukaryotic Microbiology 46 (1999) 637-647
21. Jones D.T., Taylor W.R., and Thornton J.M. A new approach to protein fold recognition. Nature 358 (1992) 86-89
22. Karling J.S. Predominantly Holocarpic and Eucarpic Simple Biflagellate Phycomycetes (1981), J. Cramer, Vaduz pp 252
23. Küpper F.C., and Müller D.G. Massive occurrence of the heterokont and fungal parasites Anisolpidium, Eurychasma and Chytridium in Pylaiella littoralis (Ectocarpales, Phaeophyceae). Nova Hedwigia 69 (1999) 381-389
24. Küpper F.C., Maier I., Müller D.G., Loiseaux-de Goer S., and Guillou L. Phylogenetic affinities of two eukaryotic pathogens of marine macroalgae, Eurychasma dicksonii (Wright) Magnus and Chytridium polysiphoniae Cohn. Cryptogamie, Algologie 27 (2006) 165-184
25. Martin R.W., and Miller C.E. Host range and taxonomy of Olpidiopsis varians. Mycotaxon 24 (1985) 411-418
26. Martin R.W., and Miller C.E. Ultrastructure of mitosis in the endoparasite Olpidiopsis varians. Mycologia 78 (1986) 11-21
27. Martin R.W., and Miller C.E. Ultrastructure of zoosporogenesis in the endoparasite Olpidiopsis varians. Mycologia 78 (1986) 230-241
28. Martin R.W., and Miller C.E. Ultrastructure of sexual reproduction in Olpidiopsis varians. Mycologia 78 (1986) 359-370
29. Migita S. Olpidiopsis disease of culture Porphyra. (in Japanese). Bulletin of the Faculty of Fisheries, Nagasaki University 28 (1969) 131-145
30. Müller D.G., Küpper F.C., and Küpper H. Infection experiments reveal broad host ranges of Eurychasma dicksonii (Oomycota) and Chytridium polysiphoniae (Chytridiomycota), two eukaryotic parasites in marine brown algae (Phaeophyceae). Phycological Research 47 (1999) 217-223
31. Müller K.M., Cannone J.J., Gutell R.R., and Sheath R.G. A structural and phylogenetic analysis of the group IC1 introns in the order Bangiales (Rhodophyta). Molecular Biology and Evolution 18 (2001) 1654-1667
32. Müller K.M., Ellenor D.W., Sherwood A.R., Sheath R.G., Cannone J.J., and Gutell R.R. Evidence for lateral transfer of an IE intron between fungal and red algal small subunit rRNA genes. Journal of Phycology 41 (2005) 380-390
33. Müller K.M., Cannone J.J., and Sheath R.G. A molecular phylogenetic analysis of the Bangiales (Rhodophyta) and description of a new genus and species, Pseudobangia kaycoleia. Phycologia 44 (2005) 146-155
34. Murray M.G., and Thompson W.F. Rapid isolation of high molecular weight plant DNA. Nucleic Acids Research 8 (1980) 4321-4325
35. Nakayama T., Watanabe S., Mitsui K., Uchida H., and Inouye I. The phylogenetic relationship between the Chlamydomonadales and Chlorococcales inferred from 18S rDNA sequence data. Phycological Research 44 (1996) 47-55
36. Nelson W.A., Farr T.J., and Broom J.E.S. Dione and Minerva, two new genera from New Zealand circumscribed for basal taxa in the Bangiales (Rhodophyta). Phycologia 44 (2005) 139-145
37. Niwa K, Furuita H, Yamamoto T, kobiyama A, 2008. Identification and characterization of a green-type mutant of Porphyra tenera Kjellman var. tamatsuensis Miura (Bangiales, Rhodophyta). Aquaculture (in press).
38. Overton S.V., Tharp T.P., and Bland C.E. Fine structure of swimming, encysting, and germinating spores of Haliphthoros milfordensis. Canadian Journal of Botany 61 (1983) 1165-1177
39. Patterson D.J. Stramenopiles: chromophytes from a protistan pespective. In: Green J.P., Leadbeater B.S.C., and Diver W.L. (Eds). The Chromophyte Algae: Problems and Perspectives (1989), Clarendon Press, Oxford 357-379
40. Powell M.J., and Blackwell W.H. Searching for homologous ultrastructural characters in zoosporic fungi. Canadian Journal of Botany 73 (1995) S693-S700
41. Provasoli L. Media and prospect for the cultivation of marine algae. In: Watanabe A., and Hattori A. (Eds). Cultures and Collections of Algae. Proceedings of the U.S.-Japan Conference 1966, Hakone (1968), Japanese Society for Plant Physiology 63-75
42. Reynolds E.S. The use of lead citrate at high pH as an electron-opaque stain in electron microscopy. Journal of Cell Biology 17 (1963) 208-211
43. Saitou N., and Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution 4 (1987) 406-425
44. Shanor L. Studies in the genus Olpidiopsis. III. Some observations on the host range of certain species. Journal of the Elisha Mitchell Scientific Society 56 (1940) 165-176
45. Sparrow F.K. Aquatic Phycomycetes. 2nd edn. (1960), The University of Michigan Press, Ann Arbor
46. Sparrow F.K. Zoosporic marine fungi from the Pacific Northwest (U.S.A.). Archiv für Mikrobiologie 66 (1969) 129-146
47. Sparrow F.K. The present status of classification in biflagellate fungi. In: Gareth-Jones E.B. (Ed). Recent Advances in Aquatic Mycology. 2nd edn. (1976), Elek Science, London 213-222
48. Spurr A.R. A low viscosity epoxy resin embedding medium for electron microscopy. Journal of Ultrastructure Research 26 (1969) 31-43
49. Swofford D.L. PAUP*: phylogenetic analysis using parsimony (*and other methods), Version 4.0b10 (2003), Sinauer Associates, Sunderland, MA
50. Takahashi M., Ichitani T., and Sasaki M. Pythium porphyrae Takahashi et Sasaki, sp. nov. causing red rot of marine red algae Porphyra spp. Transactions of the Mycological Society of Japan 18 (1977) 279-285
51. Thompson J.D., Higgins D.G., and Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22 (1994) 4673-4680
52. Uppalapati S.R., Kerwin J.L., and Fujita Y. Epifluorescence and scanning electron microscopy of host-pathogen interactions between Pythium porphyrae (Peronosporales, Oomycota) and Porphyra yezoensis (Bangiales, Rhodophyta). Botanica Marina 44 (2001) 139-145
53. West J.A., Klochkova T.A., Kim G.H., and Loiseaux-de Goër S. Olpidiopsis sp., an oomycete from Madagascar that infects Bostrychia and other red algae: host species susceptibility. Phycological Research 54 (2006) 72-85
54. Whittick A., and South G.R. Olpidiopsis antithamnionis n. sp. (Oomycetes, Olpidiopsidaceae), a parasite of Antithamnion floccosum (O. F. Müll) Kleen from Newfoundland. Archiv für Mikrobiologie 82 (1972) 353-360
55. Wuyts J., Perriere G., and Van de Peer Y. The European ribosomal RNA database. Nucleic Acids Research 32 (2004) D101-D103
56. Yokoo K., Sekimoto S., Kawamura Y., and Honda D. The early detection of Olpidiopsis sp. (Oomycetes, Chromista) which causes damage to Nori cultivation using a PCR. Nippon Suisan Gakkaishi 71 (2005) 917-922 [In Japanese.]
57. Yoshida T., Shimada S., Yoshinaga K., and Nakajima Y. Checklist of marine algae of Japan (revised in 2005). Japanese Journal of Phycology 53 (2005) 179-228 [In Japanese.]