Structural insight into the reaction mechanism and evolution of cytokinin biosynthesis

Proceedings of the National Academy of Sciences of the United States of America

Volumn 105, Issue 7, 2008, Pages 2734-2739

  Sugawara, Hajime ^a,b   Ueda, Nanae ^a   Kojima, Mikiko ^a   Makita, Nobue ^a   Yamaya, Tomoyuki ^a,c   Sakakibara, Hitoshi ^a  

^a RIKEN Center for Sustainable Resource Science   (Japan)

^b DAIICHI SANKYO CO   (Japan)

^c TOHOKU UNIVERSITY   (Japan)

Author keywords

Agrobacterium tumefaciens; Crystal structure; Isopentenyltransferase; P loop containing nucleoside triphosphate hydrolases; Trans zeatin

Indexed keywords

ADENOSINE PHOSPHATE; CYTOKININ; DIMETHYL S THIODIPHOSPHATE; ISOENZYME; ISOPENTENYLTRANSFERASE; PHOSPHORUS DERIVATIVE; UNCLASSIFIED DRUG; ZEATIN; AMINO ACID; BACTERIAL PROTEIN; DIMETHYL THIOPHOSPHITE; PHOSPHOROTHIOIC ACID DERIVATIVE; ZINC;

ARTICLE; CONTROLLED STUDY; CRYSTAL STRUCTURE; ENZYME SPECIFICITY; ENZYME SUBSTRATE; HORMONE STRUCTURE; HORMONE SYNTHESIS; MOLECULAR EVOLUTION; NONHUMAN; PHYTOCHEMISTRY; PRENYLATION; PRIORITY JOURNAL; REACTION ANALYSIS; RHIZOBIUM RADIOBACTER; SITE DIRECTED MUTAGENESIS; STRUCTURAL HOMOLOGY; BINDING SITE; BIOSYNTHESIS; CHEMICAL STRUCTURE; CHEMISTRY; GENETICS; KINETICS; METABOLISM; PROTEIN BINDING; PROTEIN TERTIARY STRUCTURE; X RAY CRYSTALLOGRAPHY;

AGROBACTERIUM; AGROBACTERIUM TUMEFACIENS; BACTERIA (MICROORGANISMS);

ADENOSINE MONOPHOSPHATE; AMINO ACIDS; BACTERIAL PROTEINS; BINDING SITES; CRYSTALLOGRAPHY, X-RAY; CYTOKININS; EVOLUTION, MOLECULAR; KINETICS; MODELS, MOLECULAR; ORGANOTHIOPHOSPHORUS COMPOUNDS; PROTEIN BINDING; PROTEIN STRUCTURE, TERTIARY; RHIZOBIUM RADIOBACTER; SUBSTRATE SPECIFICITY; ZINC;

EID: 40649108101     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.0707374105     Document Type: Article

References (43)

1. Gan S, Amasino RM (1995) Science 270:1986-1988.
2. Sachs T, Thimann KV (1967) Am J Bot 54:134-144.
3. Tanaka M, Takei K, Kojima M, Sakakibara H, Mori H (2006) Plant J 45:1028-1036.
4. Ashikari M, Sakakibara H, Lin S, Yamamoto T, Takashi T, Nishimura A, Angeles ER, Qian Q, Kitano H, Matsuoka M (2005) Science 309:741-745.
5. Kurakawa T, Ueda N, Maekawa M, Kobayashi K, Kojima M, Nagato Y, Sakakibara H, Kyozuka J (2007) Nature 445:652-655.
6. Morris RO (1986) Annu Rev Plant Physiol Plant Mol Biol 37:509-538.
7. Mok DW, Mok MC (2001) Annu Rev Plant Physiol Plant Mol Biol 52:89-118.
8. Sakakibara H (2006) Annu Rev Plant Biol 57:431-449.
9. Taya Y, Tanaka Y, Nishimura S (1978) Nature 271:545-547.
10. Akiyoshi DE, Klee H, Amasino RM, Nester EW, Gordon MP (1984) Proc Natl Acad Sci USA 81:5994-5998.
11. Kakimoto T (2001) Plant Cell Physiol 42:677-685.
12. Blackwell JR, Horgan R (1993) Phytochemistry 34:1477-1481.
13. Sakakibara H, Kasahara H, Ueda N, Kojima M, Takei K, Hishiyama S, Asami T, Okada K, Kamiya Y, Yamaya T, Yamaguchi S (2005) Proc Natl Acad Sci USA 102:9972-9977.
14. Krall L, Raschke M, Zenk MH, Baron C (2002) FEBS Lett 527:315-318.
15. Takei K, Yamaya T, Sakakibara H (2004) J Biol Chem 279:41866-41872.
16. John MC, Amasino RM (1988) J Bacteriol 170:790-795.
17. Powell GK, Hommes NG, Kuo J, Castle LA, Morris RO (1988) Mol Plant Microbe Interact 1:235-242.
18. Akiyoshi DE, Morris RO, Hinz R, Mischke BS, Kosuge T, Garfinkel DJ, Gordon MP, Nester EW (1983) Proc Natl Acad Sci USA 80:407-411.
19. Saraste M, Sibbald PR, Wittinghofer A (1990) Trends Biochem Sci 15:430-434.
20. Phan RM, Poulter CD (2001) J Org Chem 66:6705-6710.
21. Sakano Y, Okada Y, Matsunaga A, Suwama T, Kaneko T, Ito K, Noguchi H, Abe I (2004) Phytochemistry 65:2439-2446.
22. Kuzuyama T, Noel JP, Richard SB (2005) Nature 435:983-987.
23. Long SB, Casey PJ, Beese LS (2002) Nature 419:645-650.
24. Holm L, Sander C (1996) Science 273:595-603.
25. Izard T, Ellis J (2000) EMBO J 19:2690-2700.
26. Izard T (2001) Protein Sci 10:1508-1513.
27. Takei K, Dekishima Y, Eguchi T, Yamaya T, Sakakibara H (2003) J Plant Res 116:259-263.
28. LeMaster DM, Richards FM (1985) Biochemistry 24:7263-7268.
29. Hendrickson WA, Horton JR, LeMaster DM (1990) EMBO J 9:1665-1672.
30. Takei K, Sakakibara H, Sugiyama T (2001) J Biol Chem 276:26405-26410.
31. Yamamoto M, Kumasaka T, Fujisawa T, Ueki T (1998) J Synchrotron Radiat 5:222-225.
32. Otwinowski Z, Minor W (1997) Methods Enzymol 276:307-326.
33. Terwilliger TC, Berendzen J (1999) Acta Crystallogr D Biol Crystallogr 55:849-861.
34. Terwilliger TC (2000) Acta Crystallogr D 56:965-972.
35. McRee DE (1999) J Struct Biol 125:156-165.
36. Brunger AT, Adams PD, Clore GM, DeLano WL, Gros P, Grosse-Kunstleve RW, Jiang JS, Kuszewski J, Nilges M, Pannu NS, et al. (1998) Acta Crystallogr D 54:905-921.
37. Brünger AT (1997) Methods Enzymol 277:366-396.
38. Murshudov GN, Vagin AA, Lebedev A, Wilson KS, Dodson EJ (1999) Acta Crystallogr D 55:247-255.
39. Winn MD, Isupov MN, Murshudov GN (2001) Acta Crystallogr D 57:122-133.
40. Navaza J (1994) Acta Crystallogr A 50:157-163.
41. Laskowski RA, MacArthur MW, Moss DS, Thornton JM (1993) J Appl Crystallogr 26:283-291.
42. Hutchinson EG, Thornton JM (1996) Protein Sci 5:212-220.
43. DeLano WL (2002) PyMol (Delano Scientific, Palo Alto, CA). Available at: http://pymol.sourceforge.net/.