Analysis of the bacterial community found in clay wall material used in the construction of traditional Japanese buildings

Bioscience, Biotechnology and Biochemistry

Volumn 72, Issue 2, 2008, Pages 557-561

  Kitajima, Sakihito ^a   Shiono, Takeshi ^a   Ujihara, Tomomi ^b   Sato, Hiroyuki ^a,c  

^a KYOTO INSTITUTE OF TECHNOLOGY   (Japan)

^b NATIONAL INSTITUTE OF VEGETABLE AND TEA SCIENCE   (Japan)

^c Sato Plasterer Inc   (Japan)

Author keywords

Clay wall; Clostridium; Geobacter; Kyokabe; Tsuchikabe

Indexed keywords

BIOCHEMISTRY; BIODEGRADATION; CELLULOSE; RNA;

CLOSTRIDIUM; GEOBACTER; PROTEOBACTERIA;

BACTERIA;

ALUMINUM SILICATE; PRIMER DNA; RNA 16S;

ARTICLE; BACTERIUM; BUILDING MATERIAL; CLASSIFICATION; CLAY; GENETICS; ISOLATION AND PURIFICATION; JAPAN; NUCLEOTIDE SEQUENCE;

ALUMINUM SILICATES; BACTERIA; BASE SEQUENCE; CONSTRUCTION MATERIALS; DNA PRIMERS; JAPAN; RNA, RIBOSOMAL, 16S;

ACIDOBACTERIA; ACIDOBACTERIUM; BACTERIA (MICROORGANISMS); CLOSTRIDIALES; CLOSTRIDIUM; DELTAPROTEOBACTERIA; FIRMICUTES; GEOBACTER; PROTEOBACTERIA;

EID: 40449119692     PISSN: 09168451     EISSN: 13476947     Source Type: Journal    
DOI: 10.1271/bbb.70671     Document Type: Article

References (18)

1. Sato, K., and Sato, H., "Tsuchikabe · Sakan no Sigoto to Gijutsu" (in Japanese), Gakugei-shuppansha, Kyoto, pp. 40-74 (2001).
2. Nakamura, S., Nurikabe zairyôni okeru nori · susa no kouyô (1) (in Japanese). Nippon Kenchiku Gakkai Hôkoku, 1, 60-65 (1949).
3. Shimase, H., Morisako, K., and Sato, H., Hysteresis characteristics of mud wall built by traditional plastering in Kyoto (in Japanese). Proc. Annual Meeting of Kinki Branch of AIJ (Architectural Institute of Japan), 47, 333-336 (2007).
4. Straub, K. L., Hanzlik, M., and Buchholz-Cleven, B. E., The use of biologically produced ferrihydrite for the isolation of novel iron-reducing bacteria. Syst. Appl. Microbiol., 21, 442-449 (1998).
5. (III) reduction in anoxic, mining-impacted lake sediments (Lake Coeur d'Alene, Idaho). Appl. Environ. Microbiol., 66, 154-162 (2000).
6. (III)-reducers. Int. J. Syst. Evol. Microbiol., 51, 581-588 (2001).
7. (III)-reducing subsurface isolates. Int. J. Syst. Evol. Microbiol., 55, 1667-1674 (2005).
8. Iwasaki, H., and Shinozaki, M., Classification of wall clay produced in Japan Part 2. Classification of wall clay produced in Fukushima prefecture by test for particle size distribution of soils and elementary analysis (in Japanese). Nippon Kenchiku Gakkai Gakujutu Kôen Kôgai shu (Kantô), 475-476 (1997).
9. McIntyre, N. S., and Zetaruk, D. G., X-ray photoelectron spectroscopic studies of iron oxide. Anal. Chem., 49, 1521-1529 (1977).
10. Kelly, W. J., Asmundson, R. V., and Hopcroft, D. H., Isolation and characterization of a strictly anaerobic, cellulolytic spore former: Clostridium chartatabidum sp. nov. Arch. Microbiol., 147, 169-173 (1987).
11. Yang, J. C., Chynoweth, D. P., Williams, D. S., and Li, A., Clostridium aldrichii sp. nov., a cellulolytic mesophile inhabiting a wood-fermenting anaerobic digester. Int. J. Syst. Bacteriol., 40, 268-272 (1990).
12. Rainey, F. A., and Stackebrandt, E., 16S rDNA analysis reveals phylogenetic diversity among the polysaccharolytic clostridia. FEMS Microbiol. Lett., 113, 125-128 (1993).
13. Varel, V. H., Tanner, R. S., and Woese, C. R., Clostridium herbivorans sp. nov., a cellulolytic anaerobe from the pig intestine. Int. J. Syst. Bacteriol., 45, 490-494 (1995).
14. Kakiuchi, M., Isui, A., Suzuki, K., Fujino, T., Fujino, E., Kimura, T., Karita, S., Sakka, K., and Ohmiya, K., Cloning and DNA sequencing of the genes encoding Clostridium josui scaffolding protein CipA and cellulase CelD and identification of their gene products as major components of the cellulosome J. Bacteriol., 180, 4303-4308 (1998).
15. Chin, K. J., Hahn, D., Hengstmann, U., Liesack, W., and Janssen, P. H., Characterization and identification of numerically abundant culturable bacteria from the anoxic bulk soil of rice paddy microcosms. Appl. Environ. Microbiol., 65, 5042-5049 (1999).
16. Warnick, T. A., Methe, B. A., and Leschine, S. B., Clostridium phytofermentans sp. nov., a cellulolytic mesophile from forest soil. Int. J. Syst. Evol. Microbiol., 52, 1155-1160 (2002).
17. Kato, S., Haruta, S., Cui, Z. J., Ishii, M., Yokota, A., and Igarashi, Y., Clostridium straminisolvens sp. nov., a moderately thermophilic, aerotolerant and cellulolytic bacterium isolated from a cellulose-degrading bacterial community. Int. J. Syst. Evol. Microbiol., 54, 2043-2047 (2004).
18. Zhilina, T. N., Kevbrin, V. V., Turova, T. P., Lysenko, A. M., Kostrikina, N. A., and Zavarzin, G. A., Clostridium alkalicellum sp. nov., an obligately alkaliphilic cellulolytic bacterium from a soda lake in the Baikal region. Mikrobiologiia, 74, 642-653 (2005).