-
1
-
-
0001336205
-
"Phylogenetic Inference."
-
D. Hillis, C. Moritz and B. Mable (eds.) (Second Edition), Sinauer Associates, Sunderland, MA
-
D. Swofford, G. Olsen, P. Waddell and D. Hillis, "Phylogenetic Inference." In D. Hillis, C. Moritz and B. Mable (eds.) Molecular Systematics (Second Edition), Sinauer Associates, Sunderland, MA, 407-514 (1996).
-
(1996)
Molecular Systematics
, pp. 407-514
-
-
Swofford, D.1
Olsen, G.2
Waddell, P.3
Hillis, D.4
-
2
-
-
84959747425
-
"Towards defining the course of evolution: Minimum change for a specific tree topology"
-
W. Fitch, "Towards defining the course of evolution: minimum change for a specific tree topology," Systematic Zoology, 20, 406-416 (1971).
-
(1971)
Systematic Zoology
, vol.20
, pp. 406-416
-
-
Fitch, W.1
-
3
-
-
0019797407
-
"Evolutionary Trees from DNA sequences: A maximum likelihood approach"
-
J. Felsenstein, "Evolutionary Trees from DNA sequences: a maximum likelihood approach," Journal of Molecular Evolution, 17, 368-376 (1981).
-
(1981)
Journal of Molecular Evolution
, vol.17
, pp. 368-376
-
-
Felsenstein, J.1
-
4
-
-
0001213953
-
"Simultaneous comparison of three or more sequences related by a tree"
-
D. Sankoff and J. Kruskal (eds.) Addison-Wesley Publishing Company Reading, MA
-
D. Sankoff and R. Cedergren, "Simultaneous comparison of three or more sequences related by a tree." In D. Sankoff and J. Kruskal (eds.) Time Warps, String Edits, and Macromolecules: The Theory and Practice of Sequence Comparison, Addison-Wesley Publishing Company, Reading, MA, 253-263 (1983).
-
(1983)
Time Warps, String Edits, and Macromolecules: The Theory and Practice of Sequence Comparison
, pp. 253-263
-
-
Sankoff, D.1
Cedergren, R.2
-
5
-
-
0001056906
-
"Parsimony, Character-State Reconstructions, and Evolutionary Inferences"
-
R. Mayden (ed.) Stanford University Press
-
D. Swofford and W. Maddison, "Parsimony, Character-State Reconstructions, and Evolutionary Inferences." In R. Mayden (ed.) Systematics, Historical Ecology, and North American Freshwater Fishes, Stanford University Press, 186-223 (1992).
-
(1992)
Systematics, Historical Ecology, and North American Freshwater Fishes
, pp. 186-223
-
-
Swofford, D.1
Maddison, W.2
-
6
-
-
0003081588
-
"The Steiner problem in phylogeny is NP-complete"
-
L. Foulds and R. Graham, "The Steiner problem in phylogeny is NP-complete," Advances in Applied Mathematics, 3, 43-49 (1982).
-
(1982)
Advances in Applied Mathematics
, vol.3
, pp. 43-49
-
-
Foulds, L.1
Graham, R.2
-
7
-
-
0003088855
-
"The computational complexity of inferring rooted phylogenies by parsimony"
-
W. Day, D. Johnson and D. Sankoff, "The computational complexity of inferring rooted phylogenies by parsimony," Mathematical Biosciences, 81, 33-42 (1986).
-
(1986)
Mathematical Biosciences
, vol.81
, pp. 33-42
-
-
Day, W.1
Johnson, D.2
Sankoff, D.3
-
9
-
-
0028820333
-
"A new method of inference of ancestral nucleotide and amino acid sequences"
-
Z. Yang, S. Kumar and M. Nei, "A new method of inference of ancestral nucleotide and amino acid sequences," Genetics, 141, 1641-1650 (1995).
-
(1995)
Genetics
, vol.141
, pp. 1641-1650
-
-
Yang, Z.1
Kumar, S.2
Nei, M.3
-
10
-
-
0029881442
-
"Probabilistic reconstruction of ancestral protein sequences"
-
M. Koshi and R. Goldstein, "Probabilistic reconstruction of ancestral protein sequences," Journal of Molecular Evolution, 42, 313-320 (1996).
-
(1996)
Journal of Molecular Evolution
, vol.42
, pp. 313-320
-
-
Koshi, M.1
Goldstein, R.2
-
11
-
-
0001879933
-
"Molecular studies of evolution: A source of novel statistical problems"
-
S. Gupta and Y. Jackel (eds.) Academic Press, New York
-
J. Neyman, "Molecular studies of evolution: a source of novel statistical problems." In S. Gupta and Y. Jackel (eds.) Statistical Decision Theory and Related Topics, Academic Press, New York, 1-27 (1971).
-
(1971)
Statistical Decision Theory and Related Topics
, pp. 1-27
-
-
Neyman, J.1
-
12
-
-
0034117082
-
"A fast algorithm for joint reconstruction of ancestral amino acid sequences"
-
T. Pupko, I. Pe'er, R. Shamir and D. Graur, "A fast algorithm for joint reconstruction of ancestral amino acid sequences," Molecular Biology and Evolution, 17(6), 890-896 (2000).
-
(2000)
Molecular Biology and Evolution
, vol.17
, Issue.6
, pp. 890-896
-
-
Pupko, T.1
Pe'er, I.2
Shamir, R.3
Graur, D.4
-
13
-
-
0036677932
-
"A branch-and-bound algorithm for the inference of ancestral amino-acid sequences when the replacement rate varies among sites: Application to the evolution of five gene families"
-
T. Pupko, I. Pe'er, M. Hasegawa, D. Graur and N. Friedman, "A branch-and-bound algorithm for the inference of ancestral amino-acid sequences when the replacement rate varies among sites: application to the evolution of five gene families," Bioinformatics, 18(8), 1116-1123 (2002).
-
(2002)
Bioinformatics
, vol.18
, Issue.8
, pp. 1116-1123
-
-
Pupko, T.1
Pe'er, I.2
Hasegawa, M.3
Graur, D.4
Friedman, N.5
-
14
-
-
0023079987
-
"Computational complexity of inferring phylogenies from dissimilarity matrices"
-
W. Day, "Computational complexity of inferring phylogenies from dissimilarity matrices," Bulletin of Mathematical Biology, 49(4), 461-467 (1987).
-
(1987)
Bulletin of Mathematical Biology
, vol.49
, Issue.4
, pp. 461-467
-
-
Day, W.1
-
15
-
-
0004485904
-
"Computational complexity of inferring phylogenies by compatibility"
-
W. Day and D. Sankoff, "Computational complexity of inferring phylogenies by compatibility," Systematic Zoology, 35(2), 224-299 (1986).
-
(1986)
Systematic Zoology
, vol.35
, Issue.2
, pp. 224-299
-
-
Day, W.1
Sankoff, D.2
-
16
-
-
52449147252
-
"The complexity of reconstructing trees from qualitative characters and subtrees"
-
M. Steel, "The complexity of reconstructing trees from qualitative characters and subtrees," Journal of Classification, 9, 71-90 (1992).
-
(1992)
Journal of Classification
, vol.9
, pp. 71-90
-
-
Steel, M.1
-
17
-
-
0344430855
-
"Maximum likelihood inference of phylogenetic trees, with special reference to a Poisson process model of DNA substitution and to parsimony analyses"
-
N. Goldman, "Maximum likelihood inference of phylogenetic trees, with special reference to a Poisson process model of DNA substitution and to parsimony analyses," Systematic Zoology, 39(4), 345-361 (1990).
-
(1990)
Systematic Zoology
, vol.39
, Issue.4
, pp. 345-361
-
-
Goldman, N.1
-
18
-
-
0002574561
-
"Evolutionary trees of apes and humans from DNA sequences"
-
A. J. Locke and C. R. Peters (eds.) Clarendon Press, Oxford
-
P. J. Waddell and D. Penny, "Evolutionary trees of apes and humans from DNA sequences." In A. J. Locke and C. R. Peters (eds.) Handbook of Symbolic Computation, Clarendon Press, Oxford, 53-73 (1996).
-
(1996)
Handbook of Symbolic Computation
, pp. 53-73
-
-
Waddell, P.J.1
Penny, D.2
-
19
-
-
0031202202
-
"Extending Hadamard conjugations to model sequence evolution with variable rates across sites"
-
P. J. Waddell, D. Penny and T. Moore, "Extending Hadamard conjugations to model sequence evolution with variable rates across sites," Molecular Phylogenetics and Evolution, 8, 33-50 (1997).
-
(1997)
Molecular Phylogenetics and Evolution
, vol.8
, pp. 33-50
-
-
Waddell, P.J.1
Penny, D.2
Moore, T.3
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