Molecular identification of two sibling species under the name Gracilaria chilensis (Rhodophyta, Gracilariales)

Journal of Phycology

Volumn 40, Issue 4, 2004, Pages 742-747

  Cohen, Séverine ^a   Faugeron, Sylvain ^b   Martínez, Enrique A ^b   Correa, Juan A ^b   Viard, Frédérique ^a   Destombe, Christophe ^a   Valero, Myriam ^a  

^a STATION BIOLOGIQUE   (France)

^b PONTIFICIA UNIVERSIDAD CATÓLICA DE CHILE   (Chile)

Author keywords

cox2 3 spacer; Gracilaria chilensis; ITS; Rhodophyta; RUBISCO spacer; Sibling species

Indexed keywords

GENETIC MARKER;

ALGAE; AVES; EUKARYOTA; GRACILARIA; GRACILARIA CHILENSIS; GRACILARIALES; RHODOPHYTA;

EID: 4043116349     PISSN: 00223646     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1529-8817.2004.03203.x     Document Type: Article

References (28)

1. Bellorin, A. M., Oliveira, M. C. & Oliveira, E. C. 2002. Phylogeny and systematics of the marine algal family Gracilariaceae (Gracilariales, Rhodophyta) based on small subunit rDNA and ITS sequences of Atlantic and Pacific species. J. Phycol. 38:551-63.
2. Bird, C. J. 1995. A review of recent taxonomic concepts and developments in the Gracilariaceae (Rhodophyta). J. Appl. Phycol. 7:255-67.
3. Bird, C. J., McLachan, J. & Oliveira, E. C. 1986. Gracilaria chilensis sp. nov; (Rhodophyta, Gigartinales), from Pacific South America. Can. J. Bot. 64:2928-34.
4. Bird, C. J., Nelson, W. A., Rice, E. L., Ryan, K. G. & Villemur, R. 1990. A critical comparison of Gracilaria chilensis and Gracilaria sordida (Rhodophyta, Gracilariales). J. Appl. Phycol. 2:375-82.
5. Bird, C. J., Rice, E. L., Murphy, C. A. & Ragan, M. A. 1992. Phylogenetic relationships in the Gracilariales (Rhodophyta) as determined by 18S rDNA sequences. Phycologia 31:510-22.
6. Buschmann, A. H., Correa, J. A., Westermeier, R., Hernandez-Gonzalez, M. D. C. & Norambuena, R. 2001. Red algal farming in Chile: a review. Aquaculture 194:203-20.
7. Byrne, K., Zuccarello, G. C., West, J., Liao, M.-L. & Kraft, G. T. 2002. Gracilaria species (Gracilariaceae, Rhodophyta) from southeastern Australia, including a new species, Gracilaria perplexa sp. nov.: morphology, molecular relationships and agar content. Phycol. Res. 50:295-311.
8. Candia, A., González, M. A., Montoya, R., Gómez, P. & Nelson, W. 1999. Comparison of ITS RFLP patterns of Gracilaria (Rhodophyceae, Gracilariales) populations from Chile and New Zealand and an examination of interfertility of Chilean morphotypes. J. Appl. Phycol. 11:185-93.
9. Destombe, C. & Douglas, S. E. 1991. RUBISCO spacer sequence divergence in the rhodophyte alga Gracilaria verrucosa and closely related species. Curr. Genet. 19:395-8.
10. Goff, L. J., Moon, D. A. & Coleman, A. W. 1994. Molecular delineation of species and species relationships in the red algal agarophytes Gracilariopsis and Gracilaria (Gracilariales). J. Phycol. 30:521-37.
11. González, M. A., Montoya, R., Candia, A., Gómez, P. & Cisternas, M. 1996. Organellar DNA restriction fragment length polymorphism (RFLP) and nuclear random amplified polymorphism DNA (RAPD) analyses of morphotypes of Gracilaria (Gracilariales, Rhodophyta) from Chile. Hydrobiologia 326/ 327:229-34.
12. Hall, T. A. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT Nucl. Ac. Symp. Ser. 41:95-8.
13. Hamby, R. K. & Zimmer, E. A. 1992. Ribosomal RNA as a phylogenetic tool in plant systematics. In Soltis, P. S., Soltis, D. E. & Doyle, J. J. [Eds.] Molecular Systematics of Plants. Chapman and Hall, London, pp. 50-91.
14. Intasuwan, S., Gordon, M. E., Daugherty, C. H. & Lindsay, G. C. 1993. Assessment of allozyme variation among New Zealand populations of Gracilaria chilensis (Gracilariales, Rhodophyta) using starch-gel electrophoresis. Hydrobiologia 260-261:159-65.
15. Kimura, M. 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16:111-20.
16. Meneses, I. 2001. Insights on the biology of Gracilaria chilensis using molecular techniques. Cah. Biol. Mar. 42:45-51.
17. Nei, M. 1987. Molecular Evolutionary Genetics. Columbia University Press, New York, pp. 512.
18. Nelson, W. A. 1987. The New-Zealand species of Gracilaria Greville (Rhodophyta, Gigartinale). New Zealand J. Bot. 25:87-98.
19. Posada, D. & Crandall, K. A. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics 14:817-8.
20. Rozas, J., Sanchez-Delbarrio, J. C., Messeguer, X. & Rozas, R. 2003. DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics 19:2496-7.
21. Santelices, B. & Ugarte, R. 1990. Ecological differences among Chilean populations of commercial Gracilaria. J. Appl. Phycol. 2:17-26.
22. Swofford, D. 2001. PAUP*. Phylogenetic Analysis Using Parsimony (*and Other Methods). Sinauer Associates, Sunderland, MA.
23. Watterson, G. A. 1975. On the number of segregating sites in genetical models without recombination. Theor. Pop. Biol. 7:256-76.
24. Wilcox, S. J., Bloor, S. J., Hemmingson, J. A., Furneaux, R. H. & Nelson, W. A. 2001. The presence of gigartinine in a New Zealand Gracilaria species. J. Appl. Phycol. 13:409-13.
25. Zuccarello, G. C., Burger, G., West, J. A. & King, R. J. 1999a. A mitochondrial marker for red algal intraspecific relationships. Mol. Ecol. 8:1443-7.
26. Zuccarello, G. C., West, J. A., Kamiya, M. & King, R. J. 1999b. A rapid method to score plastid haplotypes in red seaweeds and its use in determining parental inheritance of plastids in the red alga Bostrychia (Ceramiales). Hydrobiologia 401:207-14.
27. Zuccarello, G. C., West, J. A. & King, R. J. 1999c. Evolutionary divergence in the Bostrychia moritziana/B. radicans complex (Rhodomelaceae, Rhodophyta): molecular and hybridization data. Phycologia 38:234-44.
28. Zuccarello, G. C. & West, J. A. 2002. Phylogeography of the Bostrychia calliptera/B. pinnata complex (Rhodomelaceae, Rhodophyta) and divergence rates based on nuclear, mitochondrial and plastid DNA markers. Phycologia 41:49-60.