-
1
-
-
36248982297
-
-
Caparros M-L, editor. Cold Spring Harbor Laboratory Press. New York: Woodbury. p
-
Allis CD, Jenuwein T, Reinberg D. 2007. Epigenetics. Caparros M-L, editor. Cold Spring Harbor Laboratory Press. New York: Woodbury. p 1-61.
-
(2007)
Epigenetics
, pp. 1-61
-
-
Allis, C.D.1
Jenuwein, T.2
Reinberg, D.3
-
2
-
-
20344385787
-
Epigenetic transgenerational actions of endocrine disruptors and male fertility
-
Anway MD, Cupp AS, Uzumcu M, Skinner MK. 2005. Epigenetic transgenerational actions of endocrine disruptors and male fertility. Science 308:1466-1469.
-
(2005)
Science
, vol.308
, pp. 1466-1469
-
-
Anway, M.D.1
Cupp, A.S.2
Uzumcu, M.3
Skinner, M.K.4
-
3
-
-
34247887457
-
Dynamic histone acetylation/deacetylation with progesterone receptor-mediated transcription
-
Aoyagi S, Archer TK. 2007. Dynamic histone acetylation/deacetylation with progesterone receptor-mediated transcription. Mol Endocrinol 21:843-856.
-
(2007)
Mol Endocrinol
, vol.21
, pp. 843-856
-
-
Aoyagi, S.1
Archer, T.K.2
-
4
-
-
0041624239
-
Regulated recruitment of HP1 to a euchromatic gene induces mitotically heritable, epigenetic gene silencing: A mammalian cell culture model of gene variegation
-
Ayyanathan K, Lechner MS, Bell P, Maul GG, Schultz DC, Yamada Y, Tanaka K, Torigoe K, Rauscher FJ III. 2003. Regulated recruitment of HP1 to a euchromatic gene induces mitotically heritable, epigenetic gene silencing: A mammalian cell culture model of gene variegation. Genes Dev 17:1855-1869.
-
(2003)
Genes Dev
, vol.17
, pp. 1855-1869
-
-
Ayyanathan, K.1
Lechner, M.S.2
Bell, P.3
Maul, G.G.4
Schultz, D.C.5
Yamada, Y.6
Tanaka, K.7
Torigoe, K.8
Rauscher III, F.J.9
-
5
-
-
34249299791
-
The complex language of chromatin regulation during transcription
-
Berger SL. 2007. The complex language of chromatin regulation during transcription. Nature 447:407-412.
-
(2007)
Nature
, vol.447
, pp. 407-412
-
-
Berger, S.L.1
-
6
-
-
19944430797
-
Genomic maps and comparative analysis of histone modifications in human and mouse
-
Bernstein BE, Kamal M, Lindblad-Toh K, Bekiranov S, Bailey DK, Huebert DJ, McMahon S, Karlsson EK, Kulbokas EJ III, Gingeras TR, Schreiber SL, Lander ES. 2005. Genomic maps and comparative analysis of histone modifications in human and mouse. Cell 120:169-181.
-
(2005)
Cell
, vol.120
, pp. 169-181
-
-
Bernstein, B.E.1
Kamal, M.2
Lindblad-Toh, K.3
Bekiranov, S.4
Bailey, D.K.5
Huebert, D.J.6
McMahon, S.7
Karlsson, E.K.8
Kulbokas III, E.J.9
Gingeras, T.R.10
Schreiber, S.L.11
Lander, E.S.12
-
7
-
-
33646070846
-
A bivalent chromatin structure marks key developmental genes in embryonic stem cells
-
Bernstein BE, Mikkelsen TS, Xie X, Kamal M, Huebert DJ, Cuff J, Fry B, Meissner A, Wernig M, Plath K, Jaenisch R, Wagschal A, Feil R, Schreiber SL, Lander ES. 2006. A bivalent chromatin structure marks key developmental genes in embryonic stem cells. Cell 125:315-326.
-
(2006)
Cell
, vol.125
, pp. 315-326
-
-
Bernstein, B.E.1
Mikkelsen, T.S.2
Xie, X.3
Kamal, M.4
Huebert, D.J.5
Cuff, J.6
Fry, B.7
Meissner, A.8
Wernig, M.9
Plath, K.10
Jaenisch, R.11
Wagschal, A.12
Feil, R.13
Schreiber, S.L.14
Lander, E.S.15
-
9
-
-
0036144048
-
DNA methylation patterns and epigenetic memory
-
Bird A. 2002. DNA methylation patterns and epigenetic memory. Genes Dev 16:6-21.
-
(2002)
Genes Dev
, vol.16
, pp. 6-21
-
-
Bird, A.1
-
10
-
-
34249337761
-
Perceptions of epigenetics
-
Bird A. 2007. Perceptions of epigenetics. Nature 447:396-398.
-
(2007)
Nature
, vol.447
, pp. 396-398
-
-
Bird, A.1
-
11
-
-
0033601073
-
Methylation-induced repression - Belts, braces, and chromatin
-
Bird AP, Wolffe AP. 1999. Methylation-induced repression - Belts, braces, and chromatin. Cell 99:451-454.
-
(1999)
Cell
, vol.99
, pp. 451-454
-
-
Bird, A.P.1
Wolffe, A.P.2
-
12
-
-
0035958918
-
Retinoblastoma-binding protein 2 (Rbp2) potentiates nuclear hormone receptor-mediated transcription
-
Chan SW, Hong W. 2001. Retinoblastoma-binding protein 2 (Rbp2) potentiates nuclear hormone receptor-mediated transcription. J Biol Chem 276:28402-28412.
-
(2001)
J Biol Chem
, vol.276
, pp. 28402-28412
-
-
Chan, S.W.1
Hong, W.2
-
13
-
-
29444461024
-
Changes in attitude, changes in latitude: Nuclear receptors remodeling chromatin to regulate transcription
-
Chen J, Kinyamu HK, Archer TK. 2006. Changes in attitude, changes in latitude: Nuclear receptors remodeling chromatin to regulate transcription. Mol Endocrinol 20:1-13.
-
(2006)
Mol Endocrinol
, vol.20
, pp. 1-13
-
-
Chen, J.1
Kinyamu, H.K.2
Archer, T.K.3
-
14
-
-
33947245128
-
RBP2 belongs to a family of demethylases, specific for tri-and dimethylated lysine 4 on histone 3
-
Christensen J, Agger K, Cloos PA, Pasini D, Rose S, Sennels L, Rappsilber J, Hansen KH, Salcini AE, Helin K. 2007. RBP2 belongs to a family of demethylases, specific for tri-and dimethylated lysine 4 on histone 3. Cell 128:1063-1076.
-
(2007)
Cell
, vol.128
, pp. 1063-1076
-
-
Christensen, J.1
Agger, K.2
Cloos, P.A.3
Pasini, D.4
Rose, S.5
Sennels, L.6
Rappsilber, J.7
Hansen, K.H.8
Salcini, A.E.9
Helin, K.10
-
15
-
-
33644859083
-
The ubiquitin proteolytic system: From a vague idea, through basic mechanisms, and onto human diseases and drug targeting
-
Ciechanover A. 2006. The ubiquitin proteolytic system: From a vague idea, through basic mechanisms, and onto human diseases and drug targeting. Neurology 66(2 Suppl 1):S7-S19.
-
(2006)
Neurology
, vol.66
, Issue.2 SUPPL. 1
-
-
Ciechanover, A.1
-
16
-
-
33746332412
-
The putative oncogene GASC1 demethylates tri- and dimethylated lysine 9 on histone H3
-
Cloos PA, Christensen J, Agger K, Maiolica A, Rappsilber J, Antal T, Hansen KH, Helin K. 2006. The putative oncogene GASC1 demethylates tri- and dimethylated lysine 9 on histone H3. Nature 442:307-311.
-
(2006)
Nature
, vol.442
, pp. 307-311
-
-
Cloos, P.A.1
Christensen, J.2
Agger, K.3
Maiolica, A.4
Rappsilber, J.5
Antal, T.6
Hansen, K.H.7
Helin, K.8
-
17
-
-
33644867538
-
The proteasome: A utility tool for transcription?
-
Collins GA, Tansey WP. 2006. The proteasome: A utility tool for transcription? Curr Opin Genet Dev 16:197-202.
-
(2006)
Curr Opin Genet Dev
, vol.16
, pp. 197-202
-
-
Collins, G.A.1
Tansey, W.P.2
-
18
-
-
0034735860
-
Receptor null mice reveal contrasting roles for estrogen receptor α and β in reproductive tissues
-
Couse JF, Curtis Hewitt S, Korach KS. 2000. Receptor null mice reveal contrasting roles for estrogen receptor α and β in reproductive tissues. J Steroid Biochem Mol Biol 74:287-296.
-
(2000)
J Steroid Biochem Mol Biol
, vol.74
, pp. 287-296
-
-
Couse, J.F.1
Curtis Hewitt, S.2
Korach, K.S.3
-
19
-
-
0030016595
-
Structure and functions of the 20S and 26S proteasomes
-
Coux O, Tanaka K, Goldberg AL. 1996. Structure and functions of the 20S and 26S proteasomes. Annu Rev Biochem 65:801-847.
-
(1996)
Annu Rev Biochem
, vol.65
, pp. 801-847
-
-
Coux, O.1
Tanaka, K.2
Goldberg, A.L.3
-
20
-
-
25444520791
-
Effector proteins for methylated histones: An expanding family
-
Daniel JA, Pray-Grant MG, Grant PA. 2005. Effector proteins for methylated histones: An expanding family. Cell Cycle 4:919-926.
-
(2005)
Cell Cycle
, vol.4
, pp. 919-926
-
-
Daniel, J.A.1
Pray-Grant, M.G.2
Grant, P.A.3
-
21
-
-
18044380913
-
Inhibition of the 26S proteasome blocks progesterone receptor-dependent transcription through failed recruitment of RNA polymerase II
-
Dennis AP, Lonard DM, Nawaz Z, O'Malley BW. 2005. Inhibition of the 26S proteasome blocks progesterone receptor-dependent transcription through failed recruitment of RNA polymerase II. J Steroid Biochem Mol Biol 94:337-346.
-
(2005)
J Steroid Biochem Mol Biol
, vol.94
, pp. 337-346
-
-
Dennis, A.P.1
Lonard, D.M.2
Nawaz, Z.3
O'Malley, B.W.4
-
22
-
-
0036261563
-
Proteasomal inhibition enhances glucocorticoid receptor transactivation and alters its subnuclear trafficking
-
Deroo BJ, Rentsch C, Sampath S, Young J, DeFranco DB, Archer TK. 2002. Proteasomal inhibition enhances glucocorticoid receptor transactivation and alters its subnuclear trafficking. Mol Cell Biol 22:4113-4123.
-
(2002)
Mol Cell Biol
, vol.22
, pp. 4113-4123
-
-
Deroo, B.J.1
Rentsch, C.2
Sampath, S.3
Young, J.4
DeFranco, D.B.5
Archer, T.K.6
-
23
-
-
34247394225
-
Mutation of Drosophila Lsd1 disrupts H3-K4 methylation, resulting in tissue-specific defects during development
-
Di Stefano L, Ji JY, Moon NS, Herr A, Dyson N. 2007. Mutation of Drosophila Lsd1 disrupts H3-K4 methylation, resulting in tissue-specific defects during development. Curr Biol 17:808-812.
-
(2007)
Curr Biol
, vol.17
, pp. 808-812
-
-
Di Stefano, L.1
Ji, J.Y.2
Moon, N.S.3
Herr, A.4
Dyson, N.5
-
24
-
-
34548715144
-
Maternal nutrient supplementation counteracts bisphenol A-induced DNA hypomethylation in early development
-
Dolinoy DC, Huang D, Jirtle RL. 2007. Maternal nutrient supplementation counteracts bisphenol A-induced DNA hypomethylation in early development. Proc Natl Acad Sci USA 104:13056-13061.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 13056-13061
-
-
Dolinoy, D.C.1
Huang, D.2
Jirtle, R.L.3
-
25
-
-
33646401100
-
Menin links estrogen receptor activation to histone H3K4 trimethylation
-
Dreijerink KM, Mulder KW, Winkler GS, Hoppener JW, Lips CJ, Timmers HT. 2006. Menin links estrogen receptor activation to histone H3K4 trimethylation. Cancer Res 66:4929-4935.
-
(2006)
Cancer Res
, vol.66
, pp. 4929-4935
-
-
Dreijerink, K.M.1
Mulder, K.W.2
Winkler, G.S.3
Hoppener, J.W.4
Lips, C.J.5
Timmers, H.T.6
-
26
-
-
33947315736
-
Cancer epigenomics: DNA methylomes and histone-modification maps
-
Esteller M. 2007. Cancer epigenomics: DNA methylomes and histone-modification maps. Nat Rev Genet 8:286-298.
-
(2007)
Nat Rev Genet
, vol.8
, pp. 286-298
-
-
Esteller, M.1
-
27
-
-
1242271997
-
Proteasomal ATPases link ubiquitylation of histone H2B to methylation of histone H3
-
Ezhkova E, Tansey WP. 2004. Proteasomal ATPases link ubiquitylation of histone H2B to methylation of histone H3. Mol Cell 13:435-442.
-
(2004)
Mol Cell
, vol.13
, pp. 435-442
-
-
Ezhkova, E.1
Tansey, W.P.2
-
28
-
-
0035947238
-
The 19S regulatory particle of the proteasome is required for efficient transcription elongation by RNA polymerase II
-
Ferdous A, Gonzalez F, Sun L, Kodadek T, Johnston SA. 2001. The 19S regulatory particle of the proteasome is required for efficient transcription elongation by RNA polymerase II. Mol Cell 7:981-991.
-
(2001)
Mol Cell
, vol.7
, pp. 981-991
-
-
Ferdous, A.1
Gonzalez, F.2
Sun, L.3
Kodadek, T.4
Johnston, S.A.5
-
29
-
-
0037159223
-
A nonproteolytic function of the 19S regulatory subunit of the 26S proteasome is required for efficient activated transcription by human RNA polymerase II
-
Ferdous A, Kodadek T, Johnston SA. 2002. A nonproteolytic function of the 19S regulatory subunit of the 26S proteasome is required for efficient activated transcription by human RNA polymerase II. Biochemistry 41:12798-12805.
-
(2002)
Biochemistry
, vol.41
, pp. 12798-12805
-
-
Ferdous, A.1
Kodadek, T.2
Johnston, S.A.3
-
30
-
-
33745146571
-
Jmjd2b antagonizes H3K9 trimethylation at pericentric heterochromatin in mammalian cells
-
Fodor BD, Kubicek S, Yonezawa M, O'Sullivan RJ, Sengupta R, Perez-Burgos L, Opravil S, Mechtler K, Schotta G, Jenuwein T. 2006. Jmjd2b antagonizes H3K9 trimethylation at pericentric heterochromatin in mammalian cells. Genes Dev 20:1557-1562.
-
(2006)
Genes Dev
, vol.20
, pp. 1557-1562
-
-
Fodor, B.D.1
Kubicek, S.2
Yonezawa, M.3
O'Sullivan, R.J.4
Sengupta, R.5
Perez-Burgos, L.6
Opravil, S.7
Mechtler, K.8
Schotta, G.9
Jenuwein, T.10
-
31
-
-
20144388146
-
Loss of acetylation at Lys16 and trimethylation at Lys20 of histone H4 is a common hallmark of human cancer
-
Fraga MF, Ballestar E, Villar-Garea A, Boix-Chornet M, Espada J, Schotta G, Bonaldi T, Haydon C, Ropero S, Petrie K, Iyer NG, Perez-Rosado A, Calvo E, Lopez JA, Cano A, Calasanz MJ, Colomer D, Piris MA, Ahn N, Imhof A, Caldas C, Jenuwein T, Esteller M. 2005. Loss of acetylation at Lys16 and trimethylation at Lys20 of histone H4 is a common hallmark of human cancer. Nat Genet 37:391-400.
-
(2005)
Nat Genet
, vol.37
, pp. 391-400
-
-
Fraga, M.F.1
Ballestar, E.2
Villar-Garea, A.3
Boix-Chornet, M.4
Espada, J.5
Schotta, G.6
Bonaldi, T.7
Haydon, C.8
Ropero, S.9
Petrie, K.10
Iyer, N.G.11
Perez-Rosado, A.12
Calvo, E.13
Lopez, J.A.14
Cano, A.15
Calasanz, M.J.16
Colomer, D.17
Piris, M.A.18
Ahn, N.19
Imhof, A.20
Caldas, C.21
Jenuwein, T.22
Esteller, M.23
more..
-
32
-
-
33846690407
-
Histone methylation-dependent mechanisms impose ligand dependency for gene activation by nuclear receptors
-
Garcia-Bassets I, Kwon YS, Telese F, Prefontaine GG, Hutt KR, Cheng CS, Ju BG, Ohgi KA, Wang J, Escoubet-Lozach L, Rose DW, Glass CK, Fu XD, Rosenfeld, MG. 2007. Histone methylation-dependent mechanisms impose ligand dependency for gene activation by nuclear receptors. Cell 128:505-518.
-
(2007)
Cell
, vol.128
, pp. 505-518
-
-
Garcia-Bassets, I.1
Kwon, Y.S.2
Telese, F.3
Prefontaine, G.G.4
Hutt, K.R.5
Cheng, C.S.6
Ju, B.G.7
Ohgi, K.A.8
Wang, J.9
Escoubet-Lozach, L.10
Rose, D.W.11
Glass, C.K.12
Fu, X.D.13
Rosenfeld, M.G.14
-
33
-
-
33748641974
-
Polycomb group and SCF ubiquitin ligases are found in a novel BCOR complex that is recruited to BCL6 targets
-
Gearhart MD, Corcoran CM, Wamstad JA, Bardwell VJ. 2006. Polycomb group and SCF ubiquitin ligases are found in a novel BCOR complex that is recruited to BCL6 targets. Mol Cell Biol 26:6880-6889.
-
(2006)
Mol Cell Biol
, vol.26
, pp. 6880-6889
-
-
Gearhart, M.D.1
Corcoran, C.M.2
Wamstad, J.A.3
Bardwell, V.J.4
-
34
-
-
1942437536
-
Physical and functional association of RNA polymerase II and the proteasome
-
Gillette TG, Gonzalez F, Delahodde A, Johnston SA, Kodadek T. 2004. Physical and functional association of RNA polymerase II and the proteasome. Proc Natl Acad Sci USA 101:5904-5909.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 5904-5909
-
-
Gillette, T.G.1
Gonzalez, F.2
Delahodde, A.3
Johnston, S.A.4
Kodadek, T.5
-
35
-
-
33847047461
-
Epigenetics: A landscape takes shape
-
Goldberg AD, Allis CD, Bernstein E. 2007. Epigenetics: A landscape takes shape. Cell 128:635-638.
-
(2007)
Cell
, vol.128
, pp. 635-638
-
-
Goldberg, A.D.1
Allis, C.D.2
Bernstein, E.3
-
36
-
-
15744401773
-
Eukaryotic cytosine methyltransferases
-
Goll MG, Bestor TH. 2005. Eukaryotic cytosine methyltransferases. Annu Rev Biochem 74:481-514.
-
(2005)
Annu Rev Biochem
, vol.74
, pp. 481-514
-
-
Goll, M.G.1
Bestor, T.H.2
-
37
-
-
0037134015
-
Recruitment of a 19S proteasome subcomplex to an activated promoter
-
Gonzalez F, Delahodde A, Kodadek T, Johnston SA. 2002. Recruitment of a 19S proteasome subcomplex to an activated promoter. Science 296:548-550.
-
(2002)
Science
, vol.296
, pp. 548-550
-
-
Gonzalez, F.1
Delahodde, A.2
Kodadek, T.3
Johnston, S.A.4
-
38
-
-
0042528729
-
Heterochromatin and epigenetic control of gene expression
-
Grewal SI, Moazed D. 2003. Heterochromatin and epigenetic control of gene expression. Science 301:798-802.
-
(2003)
Science
, vol.301
, pp. 798-802
-
-
Grewal, S.I.1
Moazed, D.2
-
39
-
-
33846313981
-
Proteasomal dysfunction: A common feature of neurodegenerative diseases? Implications for the environmental origins of neurodegeneration
-
Halliwell B. 2006. Proteasomal dysfunction: A common feature of neurodegenerative diseases? Implications for the environmental origins of neurodegeneration. Antioxid Redox Signal 8:2007-2019.
-
(2006)
Antioxid Redox Signal
, vol.8
, pp. 2007-2019
-
-
Halliwell, B.1
-
40
-
-
4143074854
-
SMYD3 encodes a histone methyltransferase involved in the proliferation of cancer cells
-
Hamamoto R, Furukawa Y, Morita M, Iimura Y, Silva FP, Li M, Yagyu R, Nakamura Y. 2004. SMYD3 encodes a histone methyltransferase involved in the proliferation of cancer cells. Nat Cell Biol 6:731-740.
-
(2004)
Nat Cell Biol
, vol.6
, pp. 731-740
-
-
Hamamoto, R.1
Furukawa, Y.2
Morita, M.3
Iimura, Y.4
Silva, F.P.5
Li, M.6
Yagyu, R.7
Nakamura, Y.8
-
41
-
-
14844318562
-
Developmental diethylstilbestrol exposure alters genetic pathways of uterine cytodifferentiation
-
Huang WW, Yin Y, Bi Q, Chiang TC, Garner N, Vuoristo J, McLachlan JA, Ma L. 2005. Developmental diethylstilbestrol exposure alters genetic pathways of uterine cytodifferentiation. Mol Endocrinol 19:669-682.
-
(2005)
Mol Endocrinol
, vol.19
, pp. 669-682
-
-
Huang, W.W.1
Yin, Y.2
Bi, Q.3
Chiang, T.C.4
Garner, N.5
Vuoristo, J.6
McLachlan, J.A.7
Ma, L.8
-
42
-
-
33947302685
-
The X-linked mental retardation gene SMCX/JARID1C defines a family of histone H3 lysine 4 demethylases
-
Iwase S, Lan F, Bayliss P, de la Torre-Ubieta L, Huarte M, Qi HH. Whetstine JR, Bonni A, Roberts TM, Shi Y. 2007. The X-linked mental retardation gene SMCX/JARID1C defines a family of histone H3 lysine 4 demethylases. Cell 128:1077-1088.
-
(2007)
Cell
, vol.128
, pp. 1077-1088
-
-
Iwase, S.1
Lan, F.2
Bayliss, P.3
de la Torre-Ubieta, L.4
Huarte, M.5
Qi, H.H.6
Whetstine, J.R.7
Bonni, A.8
Roberts, T.M.9
Shi, Y.10
-
43
-
-
0035839136
-
Translating the histone code
-
Jenuwein T, Allis CD. 2001. Translating the histone code. Science 293:1074-1080.
-
(2001)
Science
, vol.293
, pp. 1074-1080
-
-
Jenuwein, T.1
Allis, C.D.2
-
44
-
-
33947310031
-
Environmental epigenomics and disease susceptibility
-
Jirtle RL, Skinner MK. 2007. Environmental epigenomics and disease susceptibility. Nat Rev Genet 8:253-262.
-
(2007)
Nat Rev Genet
, vol.8
, pp. 253-262
-
-
Jirtle, R.L.1
Skinner, M.K.2
-
45
-
-
33847065486
-
The epigenomics of cancer
-
Jones PA, Baylin SB. 2007. The epigenomics of cancer. Cell 128:683-692.
-
(2007)
Cell
, vol.128
, pp. 683-692
-
-
Jones, P.A.1
Baylin, S.B.2
-
46
-
-
0031837109
-
Methylated DNA and MeCP2 recruit histone deacetylase to repress transcription
-
Jones PL, Veenstra GJ, Wade PA, Vermaak D, Kass SU, Landsberger N, Strouboulis J, Wolffe AP. 1998. Methylated DNA and MeCP2 recruit histone deacetylase to repress transcription. Nat Genet 19:187-191.
-
(1998)
Nat Genet
, vol.19
, pp. 187-191
-
-
Jones, P.L.1
Veenstra, G.J.2
Wade, P.A.3
Vermaak, D.4
Kass, S.U.5
Landsberger, N.6
Strouboulis, J.7
Wolffe, A.P.8
-
47
-
-
34347327136
-
Proteasome activity modulates chromatin modifications and RNA polymerase II phosphorylation to enhance glucocorticoid receptor-mediated transcription
-
Kinyamu HK, Archer TK. 2007. Proteasome activity modulates chromatin modifications and RNA polymerase II phosphorylation to enhance glucocorticoid receptor-mediated transcription. Mol Cell Biol 27:4891-4904.
-
(2007)
Mol Cell Biol
, vol.27
, pp. 4891-4904
-
-
Kinyamu, H.K.1
Archer, T.K.2
-
48
-
-
17844365062
-
Linking the ubiquitin-proteasome pathway to chromatin remodeling/modification by nuclear receptors
-
Kinyamu HK, Chen J, Archer TK. 2005. Linking the ubiquitin-proteasome pathway to chromatin remodeling/modification by nuclear receptors. J Mol Endocrinol 34:281-297.
-
(2005)
J Mol Endocrinol
, vol.34
, pp. 281-297
-
-
Kinyamu, H.K.1
Chen, J.2
Archer, T.K.3
-
49
-
-
33645877393
-
Nuclear receptor mediated gene regulation through chromatin remodeling and histone modifications
-
Kishimoto M, Fujiki R, Takezawa S, Sasaki Y, Nakamura T, Yamaoka K, Kitagawa H, Kato S. 2006. Nuclear receptor mediated gene regulation through chromatin remodeling and histone modifications. Endocr J 53:157-172.
-
(2006)
Endocr J
, vol.53
, pp. 157-172
-
-
Kishimoto, M.1
Fujiki, R.2
Takezawa, S.3
Sasaki, Y.4
Nakamura, T.5
Yamaoka, K.6
Kitagawa, H.7
Kato, S.8
-
50
-
-
32344450824
-
Genomic DNA methylation: The mark and its mediators
-
Klose RJ, Bird AP. 2006. Genomic DNA methylation: The mark and its mediators. Trends Biochem Sci 31:89-97.
-
(2006)
Trends Biochem Sci
, vol.31
, pp. 89-97
-
-
Klose, R.J.1
Bird, A.P.2
-
51
-
-
33947513027
-
Regulation of histone methylation by demethylimination and demethylation
-
Klose RJ, Zhang Y. 2007. Regulation of histone methylation by demethylimination and demethylation. Nat Rev Mol Cell Biol 8:307-318.
-
(2007)
Nat Rev Mol Cell Biol
, vol.8
, pp. 307-318
-
-
Klose, R.J.1
Zhang, Y.2
-
52
-
-
33747455678
-
JmjC-domain-containing proteins and histone demethylation
-
Klose RJ, Kallin EM, Zhang Y. 2006. JmjC-domain-containing proteins and histone demethylation. Nat Rev Genet 7:715-727.
-
(2006)
Nat Rev Genet
, vol.7
, pp. 715-727
-
-
Klose, R.J.1
Kallin, E.M.2
Zhang, Y.3
-
53
-
-
33847401344
-
The retinoblastoma binding protein RBP2 is an H3K4 demethylase
-
Klose RJ, Yan Q, Tothova Z, Yamane K, Erdjument-Bromage H, Tempst P, Gilliland DG, Zhang Y, Kaelin WG Jr. 2007. The retinoblastoma binding protein RBP2 is an H3K4 demethylase. Cell 128:889-900.
-
(2007)
Cell
, vol.128
, pp. 889-900
-
-
Klose, R.J.1
Yan, Q.2
Tothova, Z.3
Yamane, K.4
Erdjument-Bromage, H.5
Tempst, P.6
Gilliland, D.G.7
Zhang, Y.8
Kaelin Jr., W.G.9
-
54
-
-
0016221697
-
Chromatin structure: A repeating unit of histones and DNA
-
Kornberg RD. 1974. Chromatin structure: A repeating unit of histones and DNA. Science 184(139):868-871.
-
(1974)
Science
, vol.184
, Issue.139
, pp. 868-871
-
-
Kornberg, R.D.1
-
55
-
-
33847076849
-
Chromatin modifications and their function
-
Kouzarides T. 2007. Chromatin modifications and their function. Cell 128:693-705.
-
(2007)
Cell
, vol.128
, pp. 693-705
-
-
Kouzarides, T.1
-
56
-
-
34047248915
-
-
Lan F, Zaratiegui M, Villen J, Vaughn MW, Verdel A, Huarte M, Shi Y, Gygi SP, Moazed D, Martienssen RA, Shi Y. 2007. S. pombe LSD1 homologs regulate heterochromatin propagation and euchromatic gene transcription. Mol Cell 26:89-101.
-
Lan F, Zaratiegui M, Villen J, Vaughn MW, Verdel A, Huarte M, Shi Y, Gygi SP, Moazed D, Martienssen RA, Shi Y. 2007. S. pombe LSD1 homologs regulate heterochromatin propagation and euchromatic gene transcription. Mol Cell 26:89-101.
-
-
-
-
57
-
-
34347254646
-
CCR4/NOT complex associates with the proteasome and regulates histone methylation
-
Laribee RN, Shibata Y, Mersman DP, Collins SR, Kemmeren P, Roguev A, Weissman JS, Briggs SD, Krogan NJ, Strahl BD. 2007. CCR4/NOT complex associates with the proteasome and regulates histone methylation. Proc Natl Acad Sci USA 104:5836-5841.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 5836-5841
-
-
Laribee, R.N.1
Shibata, Y.2
Mersman, D.P.3
Collins, S.R.4
Kemmeren, P.5
Roguev, A.6
Weissman, J.S.7
Briggs, S.D.8
Krogan, N.J.9
Strahl, B.D.10
-
58
-
-
0003735986
-
-
10th edition. Philadelphia, PA: Elsevier, Inc
-
Larsen P, Kronenberg H, Melmed S, Polonsky K. 2003. Williams Textbook of Endocrinology. 10th edition. Philadelphia, PA: Elsevier, Inc.
-
(2003)
Williams Textbook of Endocrinology
-
-
Larsen, P.1
Kronenberg, H.2
Melmed, S.3
Polonsky, K.4
-
59
-
-
27544486193
-
The proteasome regulatory particle alters the SAGA coactivator to enhance its interactions with transcriptional activators
-
Lee D, Ezhkova E, Li B, Pattenden SG, Tansey WP, Workman JL. 2005. The proteasome regulatory particle alters the SAGA coactivator to enhance its interactions with transcriptional activators. Cell 123:423-436.
-
(2005)
Cell
, vol.123
, pp. 423-436
-
-
Lee, D.1
Ezhkova, E.2
Li, B.3
Pattenden, S.G.4
Tansey, W.P.5
Workman, J.L.6
-
60
-
-
33646855253
-
Histone H3 lysine 9 methyltransferase G9a is a transcriptional coactivator for nuclear receptors
-
Lee DY, Northrop JP, Kuo MH, Stallcup MR. 2006. Histone H3 lysine 9 methyltransferase G9a is a transcriptional coactivator for nuclear receptors. J Biol Chem 281:8476-8485.
-
(2006)
J Biol Chem
, vol.281
, pp. 8476-8485
-
-
Lee, D.Y.1
Northrop, J.P.2
Kuo, M.H.3
Stallcup, M.R.4
-
61
-
-
0028890361
-
Interaction of thyroid-hormone receptor with a conserved transcriptional mediator
-
Lee JW, Ryan F, Swaffield JC, Johnston SA, Moore DD. 1995. Interaction of thyroid-hormone receptor with a conserved transcriptional mediator. Nature 374:91-94.
-
(1995)
Nature
, vol.374
, pp. 91-94
-
-
Lee, J.W.1
Ryan, F.2
Swaffield, J.C.3
Johnston, S.A.4
Moore, D.D.5
-
62
-
-
33847383585
-
Physical and functional association of a trimethyl H3K4 demethylase and Ring6a/MBLR, a polycomb-like protein
-
Lee MG, Norman J, Shilatifard A, Shiekhattar R. 2007a. Physical and functional association of a trimethyl H3K4 demethylase and Ring6a/MBLR, a polycomb-like protein. Cell 128:877-887.
-
(2007)
Cell
, vol.128
, pp. 877-887
-
-
Lee, M.G.1
Norman, J.2
Shilatifard, A.3
Shiekhattar, R.4
-
63
-
-
34247260388
-
The trithorax-group protein Lid is a histone H3 trimethyl-Lys4 demethylase
-
Lee N, Zhang J, Klose RJ, Erdjument-Bromage H, Tempst P, Jones RS, Zhang Y. 2007b. The trithorax-group protein Lid is a histone H3 trimethyl-Lys4 demethylase. Nat Struct Mol Biol 14:341-343.
-
(2007)
Nat Struct Mol Biol
, vol.14
, pp. 341-343
-
-
Lee, N.1
Zhang, J.2
Klose, R.J.3
Erdjument-Bromage, H.4
Tempst, P.5
Jones, R.S.6
Zhang, Y.7
-
64
-
-
33847070442
-
The role of chromatin during transcription
-
Li B, Carey M, Workman JL. 2007. The role of chromatin during transcription. Cell 128:707-719.
-
(2007)
Cell
, vol.128
, pp. 707-719
-
-
Li, B.1
Carey, M.2
Workman, J.L.3
-
66
-
-
34548252291
-
Nuclear receptor coregulators: Judges, juries, and executioners of cellular regulation
-
Lonard DM, O'Malley BW. 2007. Nuclear receptor coregulators: Judges, juries, and executioners of cellular regulation. Mol Cell 27:691-700.
-
(2007)
Mol Cell
, vol.27
, pp. 691-700
-
-
Lonard, D.M.1
O'Malley, B.W.2
-
67
-
-
0033638393
-
The 26S proteasome is required for estrogen receptor-α and coactivator turnover and for efficient estrogen receptor-α transactivation
-
Lonard DM, Nawaz Z, Smith CL, O'Malley BW. 2000. The 26S proteasome is required for estrogen receptor-α and coactivator turnover and for efficient estrogen receptor-α transactivation. Mol Cell 5:939-948.
-
(2000)
Mol Cell
, vol.5
, pp. 939-948
-
-
Lonard, D.M.1
Nawaz, Z.2
Smith, C.L.3
O'Malley, B.W.4
-
68
-
-
0012473279
-
The nuclear receptor superfamily: The second decade
-
Mangelsdorf DJ, Thummel C, Beato M, Herrlich P, Schutz G, Umesono K, Blumberg B, Kastner P, Mark M, Chambon P, Evans RM. 1995. The nuclear receptor superfamily: The second decade. Cell 83:835-839.
-
(1995)
Cell
, vol.83
, pp. 835-839
-
-
Mangelsdorf, D.J.1
Thummel, C.2
Beato, M.3
Herrlich, P.4
Schutz, G.5
Umesono, K.6
Blumberg, B.7
Kastner, P.8
Mark, M.9
Chambon, P.10
Evans, R.M.11
-
69
-
-
27644589675
-
The diverse functions of histone lysine methylation
-
Martin C, Zhang Y. 2005. The diverse functions of histone lysine methylation. Nat Rev Mol Cell Biol 6:838-849.
-
(2005)
Nat Rev Mol Cell Biol
, vol.6
, pp. 838-849
-
-
Martin, C.1
Zhang, Y.2
-
70
-
-
34250192537
-
Mechanisms of epigenetic inheritance
-
Martin C, Zhang Y. 2007. Mechanisms of epigenetic inheritance. Curr Opin Cell Biol 19:266-272.
-
(2007)
Curr Opin Cell Biol
, vol.19
, pp. 266-272
-
-
Martin, C.1
Zhang, Y.2
-
71
-
-
3042794162
-
Systemic exposure to proteasome inhibitors causes a progressive model of Parkinson's disease
-
McNaught KS, Perl DP, Brownell AL, Olanow CW. 2004. Systemic exposure to proteasome inhibitors causes a progressive model of Parkinson's disease. Ann Neurol 56:149-162.
-
(2004)
Ann Neurol
, vol.56
, pp. 149-162
-
-
McNaught, K.S.1
Perl, D.P.2
Brownell, A.L.3
Olanow, C.W.4
-
72
-
-
2642544592
-
Estrogen receptor-α directs ordered, cyclical, and combinatorial recruitment of cofactors on a natural target promoter
-
Metivier R, Penot G, Hubner MR, Reid G, Brand H, Kos M, Gannon F. 2003. Estrogen receptor-α directs ordered, cyclical, and combinatorial recruitment of cofactors on a natural target promoter. Cell 115:751-763.
-
(2003)
Cell
, vol.115
, pp. 751-763
-
-
Metivier, R.1
Penot, G.2
Hubner, M.R.3
Reid, G.4
Brand, H.5
Kos, M.6
Gannon, F.7
-
73
-
-
24144462170
-
LSD1 demethylates repressive histone marks to promote androgen-receptor-dependent transcription
-
Metzger E, Wissmann M, Yin N, Muller JM, Schneider R, Peters AH, Gunther T, Buettner R, Schule R. 2005. LSD1 demethylates repressive histone marks to promote androgen-receptor-dependent transcription. Nature 437:436-439.
-
(2005)
Nature
, vol.437
, pp. 436-439
-
-
Metzger, E.1
Wissmann, M.2
Yin, N.3
Muller, J.M.4
Schneider, R.5
Peters, A.H.6
Gunther, T.7
Buettner, R.8
Schule, R.9
-
74
-
-
22944481528
-
Huntingtin interacting protein 1 modulates the transcriptional activity of nuclear hormone receptors
-
Mills IG, Gaughan L, Robson C, Ross T, McCracken S, Kelly J, Neal DE. 2005. Huntingtin interacting protein 1 modulates the transcriptional activity of nuclear hormone receptors. J Cell Biol 170:191-200.
-
(2005)
J Cell Biol
, vol.170
, pp. 191-200
-
-
Mills, I.G.1
Gaughan, L.2
Robson, C.3
Ross, T.4
McCracken, S.5
Kelly, J.6
Neal, D.E.7
-
75
-
-
33744903415
-
Identification of the MLL2 complex as a coactivator for estrogen receptor α
-
Mo R, Rao SM, Zhu YJ. 2006. Identification of the MLL2 complex as a coactivator for estrogen receptor α. J Biol Chem 281:15714-15720.
-
(2006)
J Biol Chem
, vol.281
, pp. 15714-15720
-
-
Mo, R.1
Rao, S.M.2
Zhu, Y.J.3
-
76
-
-
33748419671
-
Polycomb response elements and targeting of Polycomb group proteins in Drosophila
-
Muller J, Kassis JA. 2006. Polycomb response elements and targeting of Polycomb group proteins in Drosophila. Curr Opin Genet Dev 16:476-484.
-
(2006)
Curr Opin Genet Dev
, vol.16
, pp. 476-484
-
-
Muller, J.1
Kassis, J.A.2
-
77
-
-
0032574977
-
Transcriptional repression by the methyl-CpG-binding protein MeCP2 involves a histone deacetylase complex
-
Nan X, Ng HH, Johnson CA, Laherty CD, Turner BM, Eisenman RN, Bird A. 1998. Transcriptional repression by the methyl-CpG-binding protein MeCP2 involves a histone deacetylase complex. Nature 393:386-389.
-
(1998)
Nature
, vol.393
, pp. 386-389
-
-
Nan, X.1
Ng, H.H.2
Johnson, C.A.3
Laherty, C.D.4
Turner, B.M.5
Eisenman, R.N.6
Bird, A.7
-
78
-
-
1542297619
-
Urban renewal in the nucleus: Is protein turnover by proteasomes absolutely required for nuclear receptor-regulated transcription?
-
Nawaz Z, O'Malley BW. 2004. Urban renewal in the nucleus: Is protein turnover by proteasomes absolutely required for nuclear receptor-regulated transcription? Mol Endocrinol 18:493-499.
-
(2004)
Mol Endocrinol
, vol.18
, pp. 493-499
-
-
Nawaz, Z.1
O'Malley, B.W.2
-
79
-
-
0031711585
-
Increased tumors but uncompromised fertility in the female descendants of mice exposed developmentally to diethylstilbestrol
-
Newbold RR, Hanson RB, Jefferson WN, Bullock BC, Haseman J, McLachlan JA. 1998. Increased tumors but uncompromised fertility in the female descendants of mice exposed developmentally to diethylstilbestrol. Carcinogenesis 19:1655-1663.
-
(1998)
Carcinogenesis
, vol.19
, pp. 1655-1663
-
-
Newbold, R.R.1
Hanson, R.B.2
Jefferson, W.N.3
Bullock, B.C.4
Haseman, J.5
McLachlan, J.A.6
-
80
-
-
0033922097
-
Proliferative lesions and reproductive tract tumors in male descendants of mice exposed developmentally to diethylstilbestrol
-
Newbold RR, Hanson RB, Jefferson WN, Bullock BC, Haseman J, McLachlan JA. 2000. Proliferative lesions and reproductive tract tumors in male descendants of mice exposed developmentally to diethylstilbestrol. Carcinogenesis 21:1355-1363.
-
(2000)
Carcinogenesis
, vol.21
, pp. 1355-1363
-
-
Newbold, R.R.1
Hanson, R.B.2
Jefferson, W.N.3
Bullock, B.C.4
Haseman, J.5
McLachlan, J.A.6
-
81
-
-
34547725157
-
DNMT3L connects unmethylated lysine 4 of histone H3 to de novo methylation of DNA
-
Ooi SK, Qiu C, Bernstein E, Li K, Jia D, Yang Z, Erdjument-Bromage H, Tempst P, Lin SP, Allis CD, Cheng X, Bestor TH. 2007. DNMT3L connects unmethylated lysine 4 of histone H3 to de novo methylation of DNA. Nature 448:714-717.
-
(2007)
Nature
, vol.448
, pp. 714-717
-
-
Ooi, S.K.1
Qiu, C.2
Bernstein, E.3
Li, K.4
Jia, D.5
Yang, Z.6
Erdjument-Bromage, H.7
Tempst, P.8
Lin, S.P.9
Allis, C.D.10
Cheng, X.11
Bestor, T.H.12
-
82
-
-
1342264315
-
A corepressor/coactivator exchange complex required for transcriptional activation by nuclear receptors and other regulated transcription factors
-
Perissi V, Aggarwal A, Glass CK, Rose DW, Rosenfeld MG. 2004. A corepressor/coactivator exchange complex required for transcriptional activation by nuclear receptors and other regulated transcription factors. Cell 116:511-526.
-
(2004)
Cell
, vol.116
, pp. 511-526
-
-
Perissi, V.1
Aggarwal, A.2
Glass, C.K.3
Rose, D.W.4
Rosenfeld, M.G.5
-
83
-
-
33947693747
-
On the use of the word 'epigenetic'
-
Ptashne M. 2007. On the use of the word 'epigenetic'. Curr Biol 17:R233-R236.
-
(2007)
Curr Biol
, vol.17
-
-
Ptashne, M.1
-
84
-
-
0037351881
-
Cyclic, proteasome-mediated turnover of unliganded and liganded ERα on responsive promoters is an integral feature of estrogen signaling
-
Reid G, Hubner MR, Metivier R, Brand H, Denger S, Manu D, Beaudouin J, Ellenberg J, Gannon F. 2003. Cyclic, proteasome-mediated turnover of unliganded and liganded ERα on responsive promoters is an integral feature of estrogen signaling. Mol Cell 11:695-707.
-
(2003)
Mol Cell
, vol.11
, pp. 695-707
-
-
Reid, G.1
Hubner, M.R.2
Metivier, R.3
Brand, H.4
Denger, S.5
Manu, D.6
Beaudouin, J.7
Ellenberg, J.8
Gannon, F.9
-
85
-
-
33846983276
-
Polycomb/Trithorax response elements and epigenetic memory of cell identity
-
Ringrose L, Paro R. 2007. Polycomb/Trithorax response elements and epigenetic memory of cell identity. Development 134:223-232.
-
(2007)
Development
, vol.134
, pp. 223-232
-
-
Ringrose, L.1
Paro, R.2
-
86
-
-
22844457491
-
DNA methylation and human disease
-
Robertson KD. 2005. DNA methylation and human disease. Nat Rev Genet 6:597-610.
-
(2005)
Nat Rev Genet
, vol.6
, pp. 597-610
-
-
Robertson, K.D.1
-
87
-
-
33845907924
-
Bortezomib as an antitumor agent
-
Roccaro AM, Hideshima T, Richardson PG, Russo D, Ribatti D, Vacca A, Dammacco F, Anderson KC. 2006. Bortezomib as an antitumor agent. Curr Pharm Biotechnol 7:441-448.
-
(2006)
Curr Pharm Biotechnol
, vol.7
, pp. 441-448
-
-
Roccaro, A.M.1
Hideshima, T.2
Richardson, P.G.3
Russo, D.4
Ribatti, D.5
Vacca, A.6
Dammacco, F.7
Anderson, K.C.8
-
88
-
-
17444404622
-
Hsp90 and environmental impacts on epigenetic states: A model for the trans-generational effects of diethylstibesterol on uterine development and cancer
-
Ruden DM, Xiao L, Garfinkel MD, Lu X. 2005. Hsp90 and environmental impacts on epigenetic states: A model for the trans-generational effects of diethylstibesterol on uterine development and cancer. Hum Mol Genet 14 (Spec No 1):R149-R155.
-
(2005)
Hum Mol Genet
, vol.14
, Issue.SPEC 1
-
-
Ruden, D.M.1
Xiao, L.2
Garfinkel, M.D.3
Lu, X.4
-
89
-
-
33846019277
-
Methylation of lysine 4 on histone H3: Intricacy of writing and reading a single epigenetic mark
-
Ruthenburg AJ, Allis CD, Wysocka J. 2007. Methylation of lysine 4 on histone H3: Intricacy of writing and reading a single epigenetic mark. Mol Cell 25:15-30.
-
(2007)
Mol Cell
, vol.25
, pp. 15-30
-
-
Ruthenburg, A.J.1
Allis, C.D.2
Wysocka, J.3
-
90
-
-
34447312020
-
ESET/SETDB1 gene expression and histone H3 (K9) trimethylation in Huntington's disease
-
Ryu H, Lee J, Hagerty SW, Soh BY, McAlpin SE, Cormier KA, Smith KM, Ferrante RJ. 2006. ESET/SETDB1 gene expression and histone H3 (K9) trimethylation in Huntington's disease. Proc Natl Acad Sci USA 103:19176-19181.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 19176-19181
-
-
Ryu, H.1
Lee, J.2
Hagerty, S.W.3
Soh, B.Y.4
McAlpin, S.E.5
Cormier, K.A.6
Smith, K.M.7
Ferrante, R.J.8
-
91
-
-
1342268289
-
Histone H3 lysine 4 methylation patterns in higher eukaryotic genes
-
Schneider R, Bannister AJ, Myers FA, Thorne AW, Crane-Robinson C, Kouzarides T. 2004. Histone H3 lysine 4 methylation patterns in higher eukaryotic genes. Nat Cell Biol 6:73-77.
-
(2004)
Nat Cell Biol
, vol.6
, pp. 73-77
-
-
Schneider, R.1
Bannister, A.J.2
Myers, F.A.3
Thorne, A.W.4
Crane-Robinson, C.5
Kouzarides, T.6
-
92
-
-
33847084602
-
Genome regulation by polycomb and trithorax proteins
-
Schuettengruber B, Chourrout D, Vervoort M, Leblanc B, Cavalli G. 2007. Genome regulation by polycomb and trithorax proteins. Cell 128:735-745.
-
(2007)
Cell
, vol.128
, pp. 735-745
-
-
Schuettengruber, B.1
Chourrout, D.2
Vervoort, M.3
Leblanc, B.4
Cavalli, G.5
-
93
-
-
0037089626
-
SETDB1: A novel KAP-1-associated histone H3, lysine 9-specific methyltransferase that contributes to HP1-mediated silencing of euchromatic genes by KRAB zinc-finger proteins
-
Schultz DC, Ayyanathan K, Negorev D, Maul GG, Rauscher FJ III. 2002. SETDB1: A novel KAP-1-associated histone H3, lysine 9-specific methyltransferase that contributes to HP1-mediated silencing of euchromatic genes by KRAB zinc-finger proteins. Genes Dev 16:919-932.
-
(2002)
Genes Dev
, vol.16
, pp. 919-932
-
-
Schultz, D.C.1
Ayyanathan, K.2
Negorev, D.3
Maul, G.G.4
Rauscher III, F.J.5
-
94
-
-
33845799903
-
Polycomb silencing mechanisms and the management of genomic programmes
-
Schwartz YB, Pirrotta V. 2007. Polycomb silencing mechanisms and the management of genomic programmes. Nat Rev Genet 8:9-22.
-
(2007)
Nat Rev Genet
, vol.8
, pp. 9-22
-
-
Schwartz, Y.B.1
Pirrotta, V.2
-
95
-
-
34447519212
-
The lysine-specific demethylase 1 is required for cell proliferation in both p53-dependent and -independent manners
-
Scoumanne A, Chen X. 2007. The lysine-specific demethylase 1 is required for cell proliferation in both p53-dependent and -independent manners. J Biol Chem 282:15471-15475.
-
(2007)
J Biol Chem
, vol.282
, pp. 15471-15475
-
-
Scoumanne, A.1
Chen, X.2
-
96
-
-
33947152396
-
The Trithorax group protein Lid is a trimethyl histone H3K4 demethylase required for dMyc-induced cell growth
-
Secombe J, Li L, Carlos L, Eisenman RN. 2007. The Trithorax group protein Lid is a trimethyl histone H3K4 demethylase required for dMyc-induced cell growth. Genes Dev 21:537-551.
-
(2007)
Genes Dev
, vol.21
, pp. 537-551
-
-
Secombe, J.1
Li, L.2
Carlos, L.3
Eisenman, R.N.4
-
97
-
-
33846025127
-
Dynamic regulation of histone lysine methylation by demethylases
-
Shi Y, Whetstine JR. 2007. Dynamic regulation of histone lysine methylation by demethylases. Mol Cell 25:1-14.
-
(2007)
Mol Cell
, vol.25
, pp. 1-14
-
-
Shi, Y.1
Whetstine, J.R.2
-
98
-
-
34250168304
-
Activation of androgen receptor by histone demethylases JMJD2A and JMJD2D
-
Shin S, Janknecht R. 2007. Activation of androgen receptor by histone demethylases JMJD2A and JMJD2D. Biochem Biophys Res Commun 359:742-746.
-
(2007)
Biochem Biophys Res Commun
, vol.359
, pp. 742-746
-
-
Shin, S.1
Janknecht, R.2
-
99
-
-
33748753648
-
Widespread, but non-identical, association of proteasomal 19 and 20 S proteins with yeast chromatin
-
Sikder D, Johnston SA, Kodadek T. 2006. Widespread, but non-identical, association of proteasomal 19 and 20 S proteins with yeast chromatin. J Biol Chem 281:27346-27355.
-
(2006)
J Biol Chem
, vol.281
, pp. 27346-27355
-
-
Sikder, D.1
Johnston, S.A.2
Kodadek, T.3
-
100
-
-
33751116960
-
Histone H3 Lys 4 methylation: Caught in a bind?
-
Sims RJ III, Reinberg D. 2006. Histone H3 Lys 4 methylation: Caught in a bind? Genes Dev 20:2779-2786.
-
(2006)
Genes Dev
, vol.20
, pp. 2779-2786
-
-
Sims III, R.J.1
Reinberg, D.2
-
101
-
-
34249066239
-
Functional cooperation between HP1 and DNMT1 mediates gene silencing
-
Smallwood A, Esteve PO, Pradhan S, Carey M. 2007. Functional cooperation between HP1 and DNMT1 mediates gene silencing. Genes Dev 21:1169-1178.
-
(2007)
Genes Dev
, vol.21
, pp. 1169-1178
-
-
Smallwood, A.1
Esteve, P.O.2
Pradhan, S.3
Carey, M.4
-
102
-
-
33845645536
-
The proteasome restricts permissive transcription at tissue-specific gene loci in embryonic stem cells
-
Szutorisz H, Georgiou A, Tora L, Dillon N. 2006. The proteasome restricts permissive transcription at tissue-specific gene loci in embryonic stem cells. Cell 127:1375-1388.
-
(2006)
Cell
, vol.127
, pp. 1375-1388
-
-
Szutorisz, H.1
Georgiou, A.2
Tora, L.3
Dillon, N.4
-
103
-
-
34447324675
-
Maternal care, the epigenome and phenotypic differences in behavior
-
Szyf M, Weaver I, Meaney M. 2007. Maternal care, the epigenome and phenotypic differences in behavior. Reprod Toxicol 24:9-19.
-
(2007)
Reprod Toxicol
, vol.24
, pp. 9-19
-
-
Szyf, M.1
Weaver, I.2
Meaney, M.3
-
104
-
-
34249900454
-
The histone H3K4 demethylase SMCX links REST target genes to X-linked mental retardation
-
Tahiliani M, Mei P, Fang R, Leonor T, Rutenberg M, Shimizu F, Li J, Rao A, Shi Y. 2007. The histone H3K4 demethylase SMCX links REST target genes to X-linked mental retardation. Nature 447:601-605.
-
(2007)
Nature
, vol.447
, pp. 601-605
-
-
Tahiliani, M.1
Mei, P.2
Fang, R.3
Leonor, T.4
Rutenberg, M.5
Shimizu, F.6
Li, J.7
Rao, A.8
Shi, Y.9
-
105
-
-
33646230318
-
Histone and DNA methylation defects at Hox genes in mice expressing a SET domain-truncated form of Ml1
-
Terranova R, Agherbi H, Boned A, Meresse S, Djabali M. 2006. Histone and DNA methylation defects at Hox genes in mice expressing a SET domain-truncated form of Ml1. Proc Natl Acad Sci USA 103:6629-6634.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 6629-6634
-
-
Terranova, R.1
Agherbi, H.2
Boned, A.3
Meresse, S.4
Djabali, M.5
-
107
-
-
0036965325
-
-
Van Speybroeck L. 2002. From epigenesis to epigenetics: The case of C. H. Waddington. Ann NY Acad Sci 981:61-81.
-
Van Speybroeck L. 2002. From epigenesis to epigenetics: The case of C. H. Waddington. Ann NY Acad Sci 981:61-81.
-
-
-
-
108
-
-
32844459336
-
The Polycomb group protein EZH2 directly controls DNA methylation
-
Vire E, Brenner C, Deplus R, Blanchon L, Fraga M, Didelot C, Morey L, Van Eynde A, Bernard D, Vanderwinden JM, Bollen M, Esteller M, Di Croce L, de Launoit Y, Furks F. 2006. The Polycomb group protein EZH2 directly controls DNA methylation. Nature 439:871-874.
-
(2006)
Nature
, vol.439
, pp. 871-874
-
-
Vire, E.1
Brenner, C.2
Deplus, R.3
Blanchon, L.4
Fraga, M.5
Didelot, C.6
Morey, L.7
Van Eynde, A.8
Bernard, D.9
Vanderwinden, J.M.10
Bollen, M.11
Esteller, M.12
Di Croce, L.13
de Launoit, Y.14
Furks, F.15
-
109
-
-
0032867676
-
The 26S proteasome: A molecular machine designed for controlled proteolysis
-
Voges D, Zwickl P, Baumeister W. 1999. The 26S proteasome: A molecular machine designed for controlled proteolysis. Annu Rev Biochem 68:1015-1068.
-
(1999)
Annu Rev Biochem
, vol.68
, pp. 1015-1068
-
-
Voges, D.1
Zwickl, P.2
Baumeister, W.3
-
110
-
-
0035962668
-
Methyl CpG binding proteins: Coupling chromatin architecture to gene regulation
-
Wade PA. 2001. Methyl CpG binding proteins: Coupling chromatin architecture to gene regulation. Oncogene 20:3166-3173.
-
(2001)
Oncogene
, vol.20
, pp. 3166-3173
-
-
Wade, P.A.1
-
111
-
-
33644751843
-
Epigenetics: Environmental instructions for the genome
-
Wade PA, Archer TK. 2006. Epigenetics: Environmental instructions for the genome. Environ Health Perspect 114:A140-A141.
-
(2006)
Environ Health Perspect
, vol.114
-
-
Wade, P.A.1
Archer, T.K.2
-
112
-
-
0035900780
-
Proteasome-mediated glucocorticoid receptor degradation restricts transcriptional signaling by glucocorticoids
-
Wallace AD, Cidlowski JA. 2001. Proteasome-mediated glucocorticoid receptor degradation restricts transcriptional signaling by glucocorticoids. J Biol Chem 276:42714-42721.
-
(2001)
J Biol Chem
, vol.276
, pp. 42714-42721
-
-
Wallace, A.D.1
Cidlowski, J.A.2
-
113
-
-
34247348215
-
Opposing LSD1 complexes function in developmental gene activation and repression programmes
-
Wang J, Scully K, Zhu X, Cai L, Zhang J, Prefontaine GG, Krones A, Ohgi KA, Zhu P, Garcia-Bassets I, Liu F, Taylor H, Lozach J, Jayes FL, Korach KS, Glass CK, Fu XD, Rosenfeld MG. 2007. Opposing LSD1 complexes function in developmental gene activation and repression programmes. Nature 446:882-887.
-
(2007)
Nature
, vol.446
, pp. 882-887
-
-
Wang, J.1
Scully, K.2
Zhu, X.3
Cai, L.4
Zhang, J.5
Prefontaine, G.G.6
Krones, A.7
Ohgi, K.A.8
Zhu, P.9
Garcia-Bassets, I.10
Liu, F.11
Taylor, H.12
Lozach, J.13
Jayes, F.L.14
Korach, K.S.15
Glass, C.K.16
Fu, X.D.17
Rosenfeld, M.G.18
-
114
-
-
3342989681
-
Epigenetic programming by maternal behavior
-
Weaver IC, Cervoni N, Champagne FA, D'Alessio AC, Sharma S, Seckl JR, Dymov S, Szyf M, Meaney MJ. 2004. Epigenetic programming by maternal behavior. Nat Neurosci 7:847-854.
-
(2004)
Nat Neurosci
, vol.7
, pp. 847-854
-
-
Weaver, I.C.1
Cervoni, N.2
Champagne, F.A.3
D'Alessio, A.C.4
Sharma, S.5
Seckl, J.R.6
Dymov, S.7
Szyf, M.8
Meaney, M.J.9
-
115
-
-
34047116826
-
Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome
-
Weber M, Hellmann I, Stadler MB, Ramos L, Paabo S, Rebhan M, Schubeler D. 2007. Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome. Nat Genet 39:457-466.
-
(2007)
Nat Genet
, vol.39
, pp. 457-466
-
-
Weber, M.1
Hellmann, I.2
Stadler, M.B.3
Ramos, L.4
Paabo, S.5
Rebhan, M.6
Schubeler, D.7
-
116
-
-
33646124469
-
Reversal of histone lysine trimethylation by the JMJD2 family of histone demethylases
-
Whetstine JR, Nottke A, Lan F, Huarte M, Smolikov S, Chen Z, Spooner E, Li E, Zhang G, Colaiacovo M, Shi Y. 2006. Reversal of histone lysine trimethylation by the JMJD2 family of histone demethylases. Cell 125:467-481.
-
(2006)
Cell
, vol.125
, pp. 467-481
-
-
Whetstine, J.R.1
Nottke, A.2
Lan, F.3
Huarte, M.4
Smolikov, S.5
Chen, Z.6
Spooner, E.7
Li, E.8
Zhang, G.9
Colaiacovo, M.10
Shi, Y.11
-
117
-
-
33746295893
-
Human Ccr4-Not complex is a ligand-dependent repressor of nuclear receptor-mediated transcription
-
Winkler GS, Mulder KW, Bardwell VJ, Kalkhoven E, Timmers HT. 2006. Human Ccr4-Not complex is a ligand-dependent repressor of nuclear receptor-mediated transcription. EMBO J 25:3089-3099.
-
(2006)
EMBO J
, vol.25
, pp. 3089-3099
-
-
Winkler, G.S.1
Mulder, K.W.2
Bardwell, V.J.3
Kalkhoven, E.4
Timmers, H.T.5
-
118
-
-
33847392500
-
Cooperative demethylation by JMJD2C and LSD1 promotes androgen receptor-dependent gene expression
-
Wissmann M, Yin N, Muller JM, Greschik H, Fodor BD, Jenuwein T, Vogler C, Schneider R, Gunther T, Buettner R, Metzger E, Schule R. 2007. Cooperative demethylation by JMJD2C and LSD1 promotes androgen receptor-dependent gene expression. Nat Cell Biol 9:347-353.
-
(2007)
Nat Cell Biol
, vol.9
, pp. 347-353
-
-
Wissmann, M.1
Yin, N.2
Muller, J.M.3
Greschik, H.4
Fodor, B.D.5
Jenuwein, T.6
Vogler, C.7
Schneider, R.8
Gunther, T.9
Buettner, R.10
Metzger, E.11
Schule, R.12
-
119
-
-
33947608608
-
A novel variant of the putative demethylase gene, s-JMJD1C, is a coactivator of the AR
-
Wolf SS, Patchev VK, Obendorf M. 2007. A novel variant of the putative demethylase gene, s-JMJD1C, is a coactivator of the AR. Arch Biochem Biophys 460:56-66.
-
(2007)
Arch Biochem Biophys
, vol.460
, pp. 56-66
-
-
Wolf, S.S.1
Patchev, V.K.2
Obendorf, M.3
-
120
-
-
3543035174
-
Packaging principle: How DNA methylation and histone acetylation control the transcriptional activity of chromatin
-
Wolffe AP. 1998. Packaging principle: How DNA methylation and histone acetylation control the transcriptional activity of chromatin. J Exp Zool 282:239-244.
-
(1998)
J Exp Zool
, vol.282
, pp. 239-244
-
-
Wolffe, A.P.1
-
121
-
-
0028049298
-
Isolation and characterization of XE169, a novel human gene that escapes X-inactivation
-
Wu J, Ellison J, Salido E, Yen P, Mohandas T, Shapiro LJ. 1994. Isolation and characterization of XE169, a novel human gene that escapes X-inactivation. Hum Mol Genet 3:153-160.
-
(1994)
Hum Mol Genet
, vol.3
, pp. 153-160
-
-
Wu, J.1
Ellison, J.2
Salido, E.3
Yen, P.4
Mohandas, T.5
Shapiro, L.J.6
-
122
-
-
34250014379
-
Diverse histone modifications on histone 3 lysine 9 and their relation to DNA methylation in specifying gene silencing
-
Wu J, Wang SH, Potter D, Liu JC, Smith LT, Wu YZ, Huang TH, Plass C. 2007. Diverse histone modifications on histone 3 lysine 9 and their relation to DNA methylation in specifying gene silencing. BMC Genomics 8:131.
-
(2007)
BMC Genomics
, vol.8
, pp. 131
-
-
Wu, J.1
Wang, S.H.2
Potter, D.3
Liu, J.C.4
Smith, L.T.5
Wu, Y.Z.6
Huang, T.H.7
Plass, C.8
-
123
-
-
33745839365
-
A PHD finger of NURF couples histone H3 lysine 4 trimethylation with chromatin remodelling
-
Wysocka J, Swigut T, Xiao H, Milne TA, Kwon SY, Landry J, Kauer M, Tackett AJ, Chait BT, Badenhorst P, Wu C, Allis CD. 2006. A PHD finger of NURF couples histone H3 lysine 4 trimethylation with chromatin remodelling. Nature 442:86-90.
-
(2006)
Nature
, vol.442
, pp. 86-90
-
-
Wysocka, J.1
Swigut, T.2
Xiao, H.3
Milne, T.A.4
Kwon, S.Y.5
Landry, J.6
Kauer, M.7
Tackett, A.J.8
Chait, B.T.9
Badenhorst, P.10
Wu, C.11
Allis, C.D.12
-
124
-
-
0022327612
-
Steroid receptor regulated transcription of specific genes and gene networks
-
Yamamoto KR. 1985. Steroid receptor regulated transcription of specific genes and gene networks. Annu Rev Genet 19:209-252.
-
(1985)
Annu Rev Genet
, vol.19
, pp. 209-252
-
-
Yamamoto, K.R.1
-
125
-
-
33947244845
-
PLU-1 is an H3K4 demethylase involved in transcriptional repression and breast cancer cell proliferation
-
Yamane K, Tateishi K, Klose RJ, Fang J, Fabrizio LA, Erdjument-Bromage H, Taylor-Papadimitriou J, Tempst P, Zhang Y. 2007. PLU-1 is an H3K4 demethylase involved in transcriptional repression and breast cancer cell proliferation. Mol Cell 25:801-812.
-
(2007)
Mol Cell
, vol.25
, pp. 801-812
-
-
Yamane, K.1
Tateishi, K.2
Klose, R.J.3
Fang, J.4
Fabrizio, L.A.5
Erdjument-Bromage, H.6
Taylor-Papadimitriou, J.7
Tempst, P.8
Zhang, Y.9
-
126
-
-
22544465244
-
JMJD2A is a novel N-CoR-interacting protein and is involved in repression of the human transcription factor achaete scute-like homologue 2 (ASCL2/Hash2)
-
Zhang D, Yoon HG, Wong J. 2005. JMJD2A is a novel N-CoR-interacting protein and is involved in repression of the human transcription factor achaete scute-like homologue 2 (ASCL2/Hash2). Mol Cell Biol 25:6404-6414.
-
(2005)
Mol Cell Biol
, vol.25
, pp. 6404-6414
-
-
Zhang, D.1
Yoon, H.G.2
Wong, J.3
-
127
-
-
33748947865
-
The catalytic subunit of the proteasome is engaged in the entire process of estrogen receptor-regulated transcription
-
Zhang H, Sun L, Liang J, Yu W, Zhang Y, Wang Y, Chen Y, Li R, Sun X, Shang Y. 2006. The catalytic subunit of the proteasome is engaged in the entire process of estrogen receptor-regulated transcription. EMBO J 25:4223-4233.
-
(2006)
EMBO J
, vol.25
, pp. 4223-4233
-
-
Zhang, H.1
Sun, L.2
Liang, J.3
Yu, W.4
Zhang, Y.5
Wang, Y.6
Chen, Y.7
Li, R.8
Sun, X.9
Shang, Y.10
|