메뉴 건너뛰기




Volumn 21, Issue 3, 2008, Pages 339-349

S genotyping and S screening utilizing SFB gene polymorphism in Japanese plum and sweet cherry by dot-blot analysis

Author keywords

Allele specific oligonucleotide; Dot blot analysis; Japanese plum; SFB; Sweet cherry

Indexed keywords

GENES; OLIGONUCLEOTIDES; ORCHARDS; PLANTS (BOTANY);

EID: 39749088759     PISSN: 13803743     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11032-007-9134-6     Document Type: Article
Times cited : (12)

References (48)
  • 1
    • 85183953377 scopus 로고    scopus 로고
    • Beppu K, Takemoto Y, Yamane H, Yaegaki H, Yamaguchi M, Kataoka I, Tao R (2003) Determination of S-haplotypes of Japanese plum (Prunus salicina Lindl.) cultivars by PCR and cross-pollination tests. J Hort Sci Biotechnol 78:315-318
  • 2
    • 85184006092 scopus 로고    scopus 로고
    • Beppu K, Yamane H, Yaegaki H, Yamaguchi M, Kataoka I, Tao R (2002) Diversity of S-RNase genes and S-haplotypes in Japanese plum (Prunus salicina Lindl.). J Hort Sci Biotechnol 77:658-664
  • 3
    • 85183987587 scopus 로고    scopus 로고
    • Bošković R, Russell K, Tobutt KR (1997) Inheritance of stylar ribonucleases in cherry progenies, and reassignment of incompatibility alleles to two incompatibility groups. Euphytica 95:221-228
  • 4
    • 85183961856 scopus 로고    scopus 로고
    • Bošković R, Tobutt KR (2001) Genotyping cherry cultivars assigned to incompatibility groups, by analyzing stylar ribonucleases. Theor Apple Genet 103:475-485
  • 5
    • 85184012255 scopus 로고    scopus 로고
    • Cheng J, Han Z, Xu X, Li T (2006) Isolation and identification of the pollen-expressed polymorphic F-box genes linked to the S-locus in apple (Malus × domestica). Sex Plant Reprod 19:175-183
  • 6
    • 85183958150 scopus 로고    scopus 로고
    • Crane MB, Brown AG (1937) Incompatibility and sterility in the sweet cherry, Prunus avium L. J Pomol Hortic Sci 15:86-116
  • 7
    • 85183976457 scopus 로고    scopus 로고
    • De Cuyper B, Sonneveld T, Tobutt KR (2005) Determining self-incompatibility genotypes in Belgian wild cherries. Mol Ecol 14:945-955
  • 8
    • 85184006250 scopus 로고    scopus 로고
    • Doyle JJ, Doyle JL (1987) A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull 19:11-15
  • 9
    • 85184025331 scopus 로고    scopus 로고
    • Entani T, Iwano M, Shiba H, Che FS, Isogai A, Takayama S (2003) Comparative analysis of the self-incompatibility (S-) locus region of Prunus mume: identification of a pollen-expressed F-box gene with allelic diversity. Genes Cells 8:203-213
  • 10
    • 85183986190 scopus 로고    scopus 로고
    • Fujimoto R, Nishio T (2003) Identification of S haplotypes in Brassica by dot-blot analysis of SP11 alleles. Theor Appl Genet 106:1433-1437
  • 11
    • 85183994482 scopus 로고    scopus 로고
    • Halász J, Hegedüs A, Szabó Z, Nyéki J, Pedryc A (2007) DNA-based S-genotyping of Japanese plum and pluot cultivars to clarify incompatibility relationships. HortScience 42:5-184
  • 12
    • 85184026965 scopus 로고    scopus 로고
    • Ikeda K, Igic B, Ushijima K, Yamane H, Hauck NR, Nakano R, Sassa H, Iezzoni AF, Kohn JR, Tao R (2004a) Primary structural features of the S haplotype-specific F-box protein, SFB, in Prunus. Sex Plant Reprod 16:235-243
  • 13
    • 85184000778 scopus 로고    scopus 로고
    • Ikeda K, Watari K, Ushijima K, Yamane H, Hauck NR, Iezzoni AF, Tao R (2004b) Molecular makers for the self-compatible S-4′-haplotype, a pollen-part mutant in sweet cherry (Prunus avium L.). J Amer Soc Hort Sci 129:724-728
  • 14
    • 85183942005 scopus 로고    scopus 로고
    • Ikeda K, Ushijima K, Yamane H, Tao R, Hauck NR, Sebolt AM, Iezzoni AF (2005) Linkage and physical distance between the S-haplotype S-RNase and SFB genes in sweet cherry. Sex Plant Reprod 17:289-296
  • 15
    • 85184002499 scopus 로고    scopus 로고
    • Ishimizu T, Shinkawa T, Sakiyama F, Norioka S (1998) Primary structural features of rosaceous S-RNases with gametophytic self-incompatibility. Plant Mol Biol 37:931-941
  • 16
    • 85184012574 scopus 로고    scopus 로고
    • Janssens GA, Goderis IJ, Broekaert F, Broothaerts W (1995) A molecular method for S-allele identification in apple based on allele-specific PCR. Theor Appl Genet 91:691-698
  • 17
    • 85183944484 scopus 로고    scopus 로고
    • Lewis D (1949) Structure of the incompatibility gene. II. Heredity 3:339-355
  • 18
    • 85183971847 scopus 로고    scopus 로고
    • Moriya Y, Yamamoto K, Okada K, Iwanami H, Bessho H, Nakanishi T, Takasaki T (2007) Development of a CAPS marker system for genotyping European pear cultivars harboring 17 S alleles. Plant Cell Rep 26:345-354
  • 19
    • 85183983120 scopus 로고    scopus 로고
    • Ortega E, Sutherland BG, Dicenta F, Bošković R, Tobutt KR (2005) Determination of incompatibility genotypes in almond using first and second intron consensus primers: detection of new S alleles and correction of reported S genotypes. Plant Breeding 124:188-196
  • 20
    • 85183979821 scopus 로고    scopus 로고
    • Romero C, Vilanova S, Burgos L, Martínez-Calvo J, Vicente M, Llácer G, Madenes ML (2004) Analysis of S-locus structure in Prunus armeniaca L: identification of S-haplotype specific S-RNase and F-box genes. Plant Mol Biol 56:145-157
  • 21
    • 85183996646 scopus 로고    scopus 로고
    • Sakamoto K, Kusaba M, Nishio T (2000) Single-seed PCR-RFLP analysis for the identification of S haplotypes in commercial F1 hybrid cultivars of broccoli and cabbage. Plant Cell Rep 19:400-406
  • 22
    • 85183947692 scopus 로고    scopus 로고
    • Sapir G, Stern RA, Eisikowitch DE, Goldway M (2004) Cloning of four new Japanese plum S-alleles and determination of the compatibility between cultivars by PCR analysis. J Hort Sci Biotechnol 79:223-227
  • 23
    • 85184004100 scopus 로고    scopus 로고
    • Sassa H, Hirano H, Ikehashi H (1992) Self-incompatibility-related RNases in styles of Japanese pear (Pyrus serotina Rehd.). Plant Cell Physiol 33:811-814
  • 24
    • 85183946747 scopus 로고    scopus 로고
    • Sassa H, Kakui H, Miyamoto M, Suzuki Y, Hanada T, Ushijima K, Kusaba M, Hirano H, Koba T (2007) S locus F-box brothers: multiple and pollen-specific F-box genes with S haplotype-specific polymorphisms in apple and Japanese pear. Genetics 175:1869-1881
  • 25
    • 85183991679 scopus 로고    scopus 로고
    • Sassa H, Mase N, Hirano H, Ikehashi H (1994) Identification of self-incompatibility related glycoproteins in styles of apple (Malus x domestica). Theor Apple Genet 89:201-205
  • 26
    • 85184017691 scopus 로고    scopus 로고
    • Shirasawa K, Kishitani S, Nishio T (2005) Dot-blot analysis for identification of japonica rice cultivars and genotyping of recombinant inbred lines. Breed Sci 55:187-192
  • 27
    • 85184023692 scopus 로고    scopus 로고
    • Shirasawa K, Shiokai S, Yamaguchi M, Kishitani S, Nishio T (2006) Dot-blot-SNP analysis for practical plant breeding and cultivar identification in rice. Theor Appl Genet 113:147-155
  • 28
    • 85183950943 scopus 로고    scopus 로고
    • Sonneveld T, Robbins TP, Bošković R, Tobutt KR (2001) Cloning of six cherry self-incompatibility alleles and development of allele-specific PCR detection. Theor Appl Genet 102:1046-1055
  • 29
    • 85184000331 scopus 로고    scopus 로고
    • Sonneveld T, Robbins TP, Tobutt KR (2006) Improved discrimination of self-incompatibility S-RNase alleles in cherry and high throughput genotyping by automated sizing of first intron polymerase chain reaction products. Plant Breeding 125:305-307
  • 30
    • 85184003888 scopus 로고    scopus 로고
    • Sonneveld T, Tobutt KR, Robbins TP (2003) Allele-specific PCR detection of sweet cherry self-incompatibility (S) alleles S 1 to S 16 using consensus and allele-specific primers. Theor Appl Genet 107:1059-1070
  • 31
    • 85183956774 scopus 로고    scopus 로고
    • Sonneveld T, Tobutt KR, Vaughan SP, Robbins TP (2005) Loss of pollen-S function in two self-compatible selections of Prunus avium is associated with deletion/mutation of an S haplotype-specific F-box gene. Plant Cell 17:37-51
  • 32
    • 85184018024 scopus 로고    scopus 로고
    • Tamura M, Ushijima K, Sassa H, Hirano H, Tao R, Gradziel TM, Dandekar AM (2000) Identification of self-incompatibility genotypes of almond by allele-specific PCR analysis. Theor Appl Genet 101:344-349
  • 33
    • 85183990495 scopus 로고    scopus 로고
    • Tao R, Habu T, Namba A, Yamane H, Fuyuhiro F, Iwamoto K, Sugiura A (2002) Inheritance of S f -RNase in Japanese apricot (Prunus mume) and its relation to self-compatibility. Theor Appl Genet 105:222-228
  • 34
    • 85183951145 scopus 로고    scopus 로고
    • Tao R, Yamane H, Sassa H, Mori H, Gradziel TM, Dandekar AM, Sugiura A (1997) Identification of stylar RNases associated with gametophytic self-incompatibility in almond (Prunus dulcis). Plant Cell Physiol 38:304-311
  • 35
    • 85183953305 scopus 로고    scopus 로고
    • Tao R, Yamane H, Sugiura A, Murayama H, Sassa H, Mori H (1999) Molecular typing of S-alleles through identification, characterization and cDNA cloning for S-RNases in sweet cherry. J Am Soc Hortic Sci 124:224-233
  • 36
    • 85183979430 scopus 로고    scopus 로고
    • Ushijima K, Sassa H, Tao R, Yamane H, Dandekar AM, Gradziel TM, Hirano H (1998) Cloning and characterization of cDNAs encoding S-RNases from almond (Prunus dulcis): primary structural features and sequence diversity of the S-RNases in Rosaceae. Mol Gen Genet 260:261-268
  • 37
    • 85184009860 scopus 로고    scopus 로고
    • Ushijima K, Sassa H, Dandekar AM, Gradziel TM, Tao R, Hirano H (2003) Structural and transcriptional analysis of the self-incompatibility locus of almond: identification of a pollen-expressed F-box gene with haplotype-specific polymorphism. Plant Cell 15:771-781
  • 38
    • 85183961148 scopus 로고    scopus 로고
    • Ushijima K, Yamane H, Watari A, Kakehi E, Ikeda K, Hauck NR, Iezzoni AF, Tao R (2004) The S haplotype-specific F-box protein gene, SFB, is defective in self-compatible haplotypes of Prunus avium and P. mume. Plant J 39:573-586
  • 39
    • 85184015971 scopus 로고    scopus 로고
    • Vaughan SP, Russell K, Sargent DJ, Tobutt KR (2006) Isolation of S-locus F-box alleles in Prunus avium and their application in a novel method to determine self-incompatibility genotype. Theor Appl Genet 112:856-866
  • 40
    • 85183947504 scopus 로고    scopus 로고
    • Wünsch A, Hormaza JI (2004) Cloning and characterization of genomic DNA sequences of four self-incompatibility alleles in sweet cherry (Prunus avium L.). Theor Appl Genet 108:299-305
  • 41
    • 85183950455 scopus 로고    scopus 로고
    • Yaegaki H, Shimada T, Moriguchi T, Hayama H, Haji T, Yamaguchi M (2001) Molecular characterization of S-RNase genes and S-genotypes in the Japanese apricot (Prunus mume Sieb. et Zucc.). Sex Plant Reprod 13:251-257
  • 42
    • 85183972773 scopus 로고    scopus 로고
    • Yamane H, Tao R, Murayama H, Sugiura A (2000) Determining the S-genotypes of several sweet cherry cultivars based on PCR-RFLP analysis. J Hort Sci Biotechnol 75:562-567
  • 43
    • 85183985024 scopus 로고    scopus 로고
    • Yamane H, Tao R, Sugiura A (1999) Identification and cDNA cloning for S-RNases in self-incompatible Japanese plum (Prunus salicina Lindl. cv. Sordum). Plant Biotech 16:389-396
  • 44
    • 85183974987 scopus 로고    scopus 로고
    • Yamane H, Tao R, Sugiura A (2001) Identification and characterization of S-RNases in tetraploid sour cherry (Prunus cerasus). J Am Soc Hortic Sci 126:661-667
  • 45
    • 85183991847 scopus 로고    scopus 로고
    • Yamane H, Ikeda K, Ushijima K, Sassa H, Tao R (2003a) A pollen-expressed gene for a novel protein with an F-box motif that is very tightly linked to a gene for S-RNase in two species of cherry, Prunus cerasus and P. avium. Plant Cell Physiol 44:764-769
  • 46
    • 85183983763 scopus 로고    scopus 로고
    • Yamane H, Ushijima K, Sassa H, Tao R (2003b) The use of the S haplotype-specific F-box protein gene, SFB, as a molecular marker for S-haplotypes and self-compatibility in Japanese apricot (Prunus mume). Theor Appl Genet 107:1357-1361
  • 47
    • 85183975838 scopus 로고    scopus 로고
    • Zhang SL, Huang SX, Kitashiba H, Nishio T (2007) Identification of S-haplotype-specific F-box gene in Japanese plum (Prunus salicina Lindl.). Sex Plant Reprod 20:1-8
  • 48
    • 85183975390 scopus 로고    scopus 로고
    • Zuccherelli S, Tassinari P, Broothaerts W, Tartarini S, Dondini L, Sansavini S (2002) S-allele characterization in self-incompatible pear (Pyrus communis L.). Sex Plant Reprod 15:153-158


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.