-
1
-
-
0015351714
-
The action of 5-bromodeoxyuridine on differentiation
-
Wilt F.H., and Anderson M. The action of 5-bromodeoxyuridine on differentiation. Dev. Biol. 28 (1972) 443-447
-
(1972)
Dev. Biol.
, vol.28
, pp. 443-447
-
-
Wilt, F.H.1
Anderson, M.2
-
2
-
-
0015897922
-
Size of the BUdR sensitive targets for differentiation
-
Weintraub H. Size of the BUdR sensitive targets for differentiation. Nat. New Biol. 244 (1973) 142-143
-
(1973)
Nat. New Biol.
, vol.244
, pp. 142-143
-
-
Weintraub, H.1
-
3
-
-
0033381225
-
5-Bromodeoxyuridine induces senescence-like phenomena in mammalian cells regardless of cell type or species
-
Michishita E., Nakabayashi K., Suzuki T., Kaul S.C., Ogino H., Fujii M., Mitsui Y., and Ayusawa D. 5-Bromodeoxyuridine induces senescence-like phenomena in mammalian cells regardless of cell type or species. J. Biochem. (Tokyo) 126 (1999) 1052-1059
-
(1999)
J. Biochem. (Tokyo)
, vol.126
, pp. 1052-1059
-
-
Michishita, E.1
Nakabayashi, K.2
Suzuki, T.3
Kaul, S.C.4
Ogino, H.5
Fujii, M.6
Mitsui, Y.7
Ayusawa, D.8
-
4
-
-
0036545452
-
5-Bromo-2′-deoxyuridine efficiently suppresses division potential of the yeast Saccharomyces cerevisiae
-
Fujii M., Ito H., Hasegawa T., Suzuki T., Adachi N., and Ayusawa D. 5-Bromo-2′-deoxyuridine efficiently suppresses division potential of the yeast Saccharomyces cerevisiae. Biosci. Biotechnol. Biochem. 66 (2002) 906-909
-
(2002)
Biosci. Biotechnol. Biochem.
, vol.66
, pp. 906-909
-
-
Fujii, M.1
Ito, H.2
Hasegawa, T.3
Suzuki, T.4
Adachi, N.5
Ayusawa, D.6
-
5
-
-
0036354627
-
Synergistic induction of the senescence-associated genes by 5-bromodeoxyuridine and AT-binding ligands in HeLa cells
-
Suzuki T., Michishita E., Ogino H., Fujii M., and Ayusawa D. Synergistic induction of the senescence-associated genes by 5-bromodeoxyuridine and AT-binding ligands in HeLa cells. Exp. Cell Res. 276 (2002) 174-184
-
(2002)
Exp. Cell Res.
, vol.276
, pp. 174-184
-
-
Suzuki, T.1
Michishita, E.2
Ogino, H.3
Fujii, M.4
Ayusawa, D.5
-
6
-
-
3242740226
-
Functional and chromosomal clustering of genes responsive to 5-bromodeoxyuridine in human cells
-
Minagawa S., Nakabayashi K., Fujii M., Scherer S.W., and Ayusawa D. Functional and chromosomal clustering of genes responsive to 5-bromodeoxyuridine in human cells. Exp. Gerontol. 39 (2004) 1069-1078
-
(2004)
Exp. Gerontol.
, vol.39
, pp. 1069-1078
-
-
Minagawa, S.1
Nakabayashi, K.2
Fujii, M.3
Scherer, S.W.4
Ayusawa, D.5
-
7
-
-
0015952908
-
Differential spiralization along mammalian mitotic chromosomes. II. 5-bromodeoxyuridine and 5-bromodeoxycytidine-revealed differentiation in human chromosomes
-
Zakharov A.F., Baranovskaya L.I., Ibraimov A.I., Benjusch V.A., Demintseva V.S., and Oblapenko N.G. Differential spiralization along mammalian mitotic chromosomes. II. 5-bromodeoxyuridine and 5-bromodeoxycytidine-revealed differentiation in human chromosomes. Chromosoma 44 (1974) 343-359
-
(1974)
Chromosoma
, vol.44
, pp. 343-359
-
-
Zakharov, A.F.1
Baranovskaya, L.I.2
Ibraimov, A.I.3
Benjusch, V.A.4
Demintseva, V.S.5
Oblapenko, N.G.6
-
8
-
-
0035872234
-
5-Bromodeoxyuridine suppresses position effect variegation of transgenes in HeLa cells
-
Suzuki T., Yaginuma M., Oishi T., Michishita E., Ogino H., Fujii M., and Ayusawa D. 5-Bromodeoxyuridine suppresses position effect variegation of transgenes in HeLa cells. Exp. Cell Res. 266 (2001) 53-63
-
(2001)
Exp. Cell Res.
, vol.266
, pp. 53-63
-
-
Suzuki, T.1
Yaginuma, M.2
Oishi, T.3
Michishita, E.4
Ogino, H.5
Fujii, M.6
Ayusawa, D.7
-
9
-
-
23044516024
-
Halogenated thymidine analogues restore the expression of silenced genes without demethylation
-
Fan J., Kodama E., Koh Y., Nakao M., and Matsuoka M. Halogenated thymidine analogues restore the expression of silenced genes without demethylation. Cancer Res. 65 (2005) 6927-6933
-
(2005)
Cancer Res.
, vol.65
, pp. 6927-6933
-
-
Fan, J.1
Kodama, E.2
Koh, Y.3
Nakao, M.4
Matsuoka, M.5
-
10
-
-
0842348227
-
AT-hook proteins stimulate induction of senescence markers triggered by 5-bromodeoxyuridine in mammalian cells
-
Satou W., Suzuki T., Noguchi T., Ogino H., Fujii M., and Ayusawa D. AT-hook proteins stimulate induction of senescence markers triggered by 5-bromodeoxyuridine in mammalian cells. Exp. Gerontol. 39 (2004) 173-179
-
(2004)
Exp. Gerontol.
, vol.39
, pp. 173-179
-
-
Satou, W.1
Suzuki, T.2
Noguchi, T.3
Ogino, H.4
Fujii, M.5
Ayusawa, D.6
-
11
-
-
35048857955
-
Transcription factor access to promoter elements
-
Morse R.H. Transcription factor access to promoter elements. J. Cell Biochem. 102 (2007) 560-570
-
(2007)
J. Cell Biochem.
, vol.102
, pp. 560-570
-
-
Morse, R.H.1
-
12
-
-
33747500567
-
A genomic code for nucleosome positioning
-
Segal E., Fondufe-Mittendorf Y., Chen L., Thastrom A., Field Y., Moore I.K., Wang J.P., and Widom J. A genomic code for nucleosome positioning. Nature 442 (2006) 772-778
-
(2006)
Nature
, vol.442
, pp. 772-778
-
-
Segal, E.1
Fondufe-Mittendorf, Y.2
Chen, L.3
Thastrom, A.4
Field, Y.5
Moore, I.K.6
Wang, J.P.7
Widom, J.8
-
13
-
-
33749153628
-
Nucleosome positions predicted through comparative genomics
-
Ioshikhes I.P., Albert I., Zanton S.J., and Pugh B.F. Nucleosome positions predicted through comparative genomics. Nat. Genet. 38 (2006) 1210-1215
-
(2006)
Nat. Genet.
, vol.38
, pp. 1210-1215
-
-
Ioshikhes, I.P.1
Albert, I.2
Zanton, S.J.3
Pugh, B.F.4
-
14
-
-
0033010426
-
DNA bend sites in the human beta-globin locus: evidence for a basic and universal structural component of genomic DNA
-
Wada-Kiyama Y., Suzuki K., and Kiyama R. DNA bend sites in the human beta-globin locus: evidence for a basic and universal structural component of genomic DNA. Mol. Biol. Evol. 16 (1999) 922-930
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 922-930
-
-
Wada-Kiyama, Y.1
Suzuki, K.2
Kiyama, R.3
-
15
-
-
0037125194
-
What positions nucleosomes?-A model
-
Kiyama R., and Trifonov E.N. What positions nucleosomes?-A model. FEBS Lett. 523 (2002) 7-11
-
(2002)
FEBS Lett.
, vol.523
, pp. 7-11
-
-
Kiyama, R.1
Trifonov, E.N.2
-
16
-
-
0036928525
-
Binding of 5-bromouracil-containing S/MAR DNA to the nuclear matrix
-
Ogino H., Fujii M., Satou W., Suzuki T., Michishita E., and Ayusawa D. Binding of 5-bromouracil-containing S/MAR DNA to the nuclear matrix. DNA Res. 9 (2002) 25-29
-
(2002)
DNA Res.
, vol.9
, pp. 25-29
-
-
Ogino, H.1
Fujii, M.2
Satou, W.3
Suzuki, T.4
Michishita, E.5
Ayusawa, D.6
-
17
-
-
0025267839
-
Yeast alpha 2 repressor positions nucleosomes in TRP1/ARS1 chromatin
-
Roth S.Y., Dean A., and Simpson R.T. Yeast alpha 2 repressor positions nucleosomes in TRP1/ARS1 chromatin. Mol. Cell Biol. 10 (1990) 2247-2260
-
(1990)
Mol. Cell Biol.
, vol.10
, pp. 2247-2260
-
-
Roth, S.Y.1
Dean, A.2
Simpson, R.T.3
-
18
-
-
0034600950
-
Destabilization of nucleosomes by an unusual DNA conformation adopted by poly(dA). poly(dT) tracts in vivo
-
Shimizu M., Mori T., Sakurai T., and Shindo H. Destabilization of nucleosomes by an unusual DNA conformation adopted by poly(dA). poly(dT) tracts in vivo. EMBO J. 19 (2000) 3358-3365
-
(2000)
EMBO J.
, vol.19
, pp. 3358-3365
-
-
Shimizu, M.1
Mori, T.2
Sakurai, T.3
Shindo, H.4
-
19
-
-
0032912799
-
Binding of Gal4p and bicoid to nucleosomal sites in yeast in the absence of replication
-
Balasubramanian B., and Morse R.H. Binding of Gal4p and bicoid to nucleosomal sites in yeast in the absence of replication. Mol. Cell Biol. 19 (1999) 2977-2985
-
(1999)
Mol. Cell Biol.
, vol.19
, pp. 2977-2985
-
-
Balasubramanian, B.1
Morse, R.H.2
-
20
-
-
0025799783
-
Nucleosomes are positioned with base pair precision adjacent to the alpha 2 operator in Saccharomyces cerevisiae
-
Shimizu M., Roth S.Y., Szent-Gyorgyi C., and Simpson R.T. Nucleosomes are positioned with base pair precision adjacent to the alpha 2 operator in Saccharomyces cerevisiae. EMBO J. 10 (1991) 3033-3041
-
(1991)
EMBO J.
, vol.10
, pp. 3033-3041
-
-
Shimizu, M.1
Roth, S.Y.2
Szent-Gyorgyi, C.3
Simpson, R.T.4
-
21
-
-
22744432660
-
Genome-scale identification of nucleosome positions in S. cerevisiae
-
Yuan G.C., Liu Y.J., Dion M.F., Slack M.D., Wu L.F., Altschuler S.J., and Rando O.J. Genome-scale identification of nucleosome positions in S. cerevisiae. Science 309 (2005) 626-630
-
(2005)
Science
, vol.309
, pp. 626-630
-
-
Yuan, G.C.1
Liu, Y.J.2
Dion, M.F.3
Slack, M.D.4
Wu, L.F.5
Altschuler, S.J.6
Rando, O.J.7
-
22
-
-
0023513912
-
The structure of an oligo(dA).oligo(dT) tract and its biological implications
-
Nelson H.C., Finch J.T., Luisi B.F., and Klug A. The structure of an oligo(dA).oligo(dT) tract and its biological implications. Nature 330 (1987) 221-226
-
(1987)
Nature
, vol.330
, pp. 221-226
-
-
Nelson, H.C.1
Finch, J.T.2
Luisi, B.F.3
Klug, A.4
-
23
-
-
0034999881
-
Poly(dA-dT) promoter elements increase the equilibrium accessibility of nucleosomal DNA target sites
-
Anderson J.D., and Widom J. Poly(dA-dT) promoter elements increase the equilibrium accessibility of nucleosomal DNA target sites. Mol. Cell Biol. 21 (2001) 3830-3839
-
(2001)
Mol. Cell Biol.
, vol.21
, pp. 3830-3839
-
-
Anderson, J.D.1
Widom, J.2
-
24
-
-
0025194240
-
Poly(dA).poly(dT) rich sequences are not sufficient to exclude nucleosome formation in a constitutive yeast promoter
-
Losa R., Omari S., and Thoma F. Poly(dA).poly(dT) rich sequences are not sufficient to exclude nucleosome formation in a constitutive yeast promoter. Nucleic Acids Res. 18 (1990) 3495-3502
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 3495-3502
-
-
Losa, R.1
Omari, S.2
Thoma, F.3
-
26
-
-
36049046022
-
Overexpression of HAM1 gene detoxifies 5-bromodeoxyuridine in the yeast Saccharomyces cerevisiae
-
Takayama S., Fujii M., Kurosawa A., Adachi N., and Ayusawa D. Overexpression of HAM1 gene detoxifies 5-bromodeoxyuridine in the yeast Saccharomyces cerevisiae. Curr. Genet. 52 (2007) 203-211
-
(2007)
Curr. Genet.
, vol.52
, pp. 203-211
-
-
Takayama, S.1
Fujii, M.2
Kurosawa, A.3
Adachi, N.4
Ayusawa, D.5
-
27
-
-
0027323996
-
DNA-protein interactions at the S. cerevisiae alpha 2 operator in vivo
-
Murphy M.R., Shimizu M., Roth S.Y., Dranginis A.M., and Simpson R.T. DNA-protein interactions at the S. cerevisiae alpha 2 operator in vivo. Nucleic Acids Res. 21 (1993) 3295-3300
-
(1993)
Nucleic Acids Res.
, vol.21
, pp. 3295-3300
-
-
Murphy, M.R.1
Shimizu, M.2
Roth, S.Y.3
Dranginis, A.M.4
Simpson, R.T.5
-
28
-
-
0017728872
-
The effects of incorporation of 5-halogenated deoxyuridines into the DNA of eukaryotic cells
-
Goz B. The effects of incorporation of 5-halogenated deoxyuridines into the DNA of eukaryotic cells. Pharmacol. Rev. 29 (1977) 249-272
-
(1977)
Pharmacol. Rev.
, vol.29
, pp. 249-272
-
-
Goz, B.1
-
29
-
-
0018093504
-
Studies on gene control regions. VII. Effect of 5-bromouracil-substituted lac operators on the lac operator-lac repressor interaction
-
Goeddel D.V., Yansura D.G., Winston C., and Caruthers M.H. Studies on gene control regions. VII. Effect of 5-bromouracil-substituted lac operators on the lac operator-lac repressor interaction. J. Mol. Biol. 123 (1978) 661-687
-
(1978)
J. Mol. Biol.
, vol.123
, pp. 661-687
-
-
Goeddel, D.V.1
Yansura, D.G.2
Winston, C.3
Caruthers, M.H.4
-
30
-
-
0022910040
-
The effects of base analogue substitutions on the cleavage by the EcoRI restriction endonuclease of octadeoxyribonucleotides containing modified EcoRI recognition sequences
-
Brennan C.A., Van Cleve M.D., and Gumport R.I. The effects of base analogue substitutions on the cleavage by the EcoRI restriction endonuclease of octadeoxyribonucleotides containing modified EcoRI recognition sequences. J. Biol. Chem. 261 (1986) 7270-7278
-
(1986)
J. Biol. Chem.
, vol.261
, pp. 7270-7278
-
-
Brennan, C.A.1
Van Cleve, M.D.2
Gumport, R.I.3
-
31
-
-
0020284762
-
Helix geometry and hydration in A-DNA, B-DNA, and Z-DNA
-
Dickerson R.E., Drew H.R., Conner B.N., Kopka M.L., and Pjura P.E. Helix geometry and hydration in A-DNA, B-DNA, and Z-DNA. Cold Spring Harb. Symp. Quant. Biol. 47 Pt. 1 (1983) 13-24
-
(1983)
Cold Spring Harb. Symp. Quant. Biol.
, vol.47 PART 1
, pp. 13-24
-
-
Dickerson, R.E.1
Drew, H.R.2
Conner, B.N.3
Kopka, M.L.4
Pjura, P.E.5
-
32
-
-
0024462170
-
The DNA binding site of the Xenopus transcription factor IIIA has a non-B-form structure
-
Fairall L., Martin S., and Rhodes D. The DNA binding site of the Xenopus transcription factor IIIA has a non-B-form structure. EMBO J. 8 (1989) 1809-1817
-
(1989)
EMBO J.
, vol.8
, pp. 1809-1817
-
-
Fairall, L.1
Martin, S.2
Rhodes, D.3
-
33
-
-
0027087437
-
Zinc induces a bend within the transcription factor IIIA-binding region of the 5S RNA gene
-
Nickol J., and Rau D.C. Zinc induces a bend within the transcription factor IIIA-binding region of the 5S RNA gene. J. Mol. Biol. 228 (1992) 1115-1123
-
(1992)
J. Mol. Biol.
, vol.228
, pp. 1115-1123
-
-
Nickol, J.1
Rau, D.C.2
-
34
-
-
0030581180
-
Helix rigidity of DNA: the meroduplex as an experimental paradigm
-
Hagerman K.R., and Hagerman P.J. Helix rigidity of DNA: the meroduplex as an experimental paradigm. J. Mol. Biol. 260 (1996) 207-223
-
(1996)
J. Mol. Biol.
, vol.260
, pp. 207-223
-
-
Hagerman, K.R.1
Hagerman, P.J.2
-
35
-
-
0023047191
-
Detection, sequence patterns and function of unusual DNA structures
-
Anderson J.N. Detection, sequence patterns and function of unusual DNA structures. Nucleic Acids Res. 14 (1986) 8513-8533
-
(1986)
Nucleic Acids Res.
, vol.14
, pp. 8513-8533
-
-
Anderson, J.N.1
-
36
-
-
0027103633
-
Chromosomal illegitimate recombination in mammalian cells is associated with intrinsically bent DNA elements
-
Milot E., Belmaaza A., Wallenburg J.C., Gusew N., Bradley W.E., and Chartrand P. Chromosomal illegitimate recombination in mammalian cells is associated with intrinsically bent DNA elements. EMBO J. 11 (1992) 5063-5070
-
(1992)
EMBO J.
, vol.11
, pp. 5063-5070
-
-
Milot, E.1
Belmaaza, A.2
Wallenburg, J.C.3
Gusew, N.4
Bradley, W.E.5
Chartrand, P.6
-
37
-
-
0032213283
-
Suppression of electrophoretic anomaly of bent DNA segments by the structural property that causes rapid migration
-
Ohyama T., Tsujibayashi H., Tagashira H., Inano K., Ueda T., Hirota Y., and Hashimoto K. Suppression of electrophoretic anomaly of bent DNA segments by the structural property that causes rapid migration. Nucleic Acids Res. 26 (1998) 4811-4817
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 4811-4817
-
-
Ohyama, T.1
Tsujibayashi, H.2
Tagashira, H.3
Inano, K.4
Ueda, T.5
Hirota, Y.6
Hashimoto, K.7
-
38
-
-
33747617082
-
Structural property of DNA that migrates faster in gel electrophoresis, as deduced by CD spectroscopy
-
Matsugami A., Tani K., Ouhashi K., Uesugi S., Morita M., Ohyama T., and Katahira M. Structural property of DNA that migrates faster in gel electrophoresis, as deduced by CD spectroscopy. Nucleosides Nucleotides Nucleic Acids 25 (2006) 417-425
-
(2006)
Nucleosides Nucleotides Nucleic Acids
, vol.25
, pp. 417-425
-
-
Matsugami, A.1
Tani, K.2
Ouhashi, K.3
Uesugi, S.4
Morita, M.5
Ohyama, T.6
Katahira, M.7
-
39
-
-
0023041394
-
An underlying repeat in some transcriptional control sequences corresponding to half a double helical turn of DNA
-
Rhodes D., and Klug A. An underlying repeat in some transcriptional control sequences corresponding to half a double helical turn of DNA. Cell 46 (1986) 123-132
-
(1986)
Cell
, vol.46
, pp. 123-132
-
-
Rhodes, D.1
Klug, A.2
-
40
-
-
0029075461
-
Molecular basis of human 46X,Y sex reversal revealed from the three-dimensional solution structure of the human SRY-DNA complex
-
Werner M.H., Huth J.R., Gronenborn A.M., and Clore G.M. Molecular basis of human 46X,Y sex reversal revealed from the three-dimensional solution structure of the human SRY-DNA complex. Cell 81 (1995) 705-714
-
(1995)
Cell
, vol.81
, pp. 705-714
-
-
Werner, M.H.1
Huth, J.R.2
Gronenborn, A.M.3
Clore, G.M.4
-
41
-
-
1442351139
-
Protein-DNA hydrophobic recognition in the minor groove is facilitated by sugar switching
-
Tolstorukov M.Y., Jernigan R.L., and Zhurkin V.B. Protein-DNA hydrophobic recognition in the minor groove is facilitated by sugar switching. J. Mol. Biol. 337 (2004) 65-76
-
(2004)
J. Mol. Biol.
, vol.337
, pp. 65-76
-
-
Tolstorukov, M.Y.1
Jernigan, R.L.2
Zhurkin, V.B.3
-
43
-
-
0037094162
-
Specific natural DNA-bound lipids in post-genome era. The lipid conception of chromatin organization
-
Struchkov V.A., Strazhevskaya N.B., and Zhdanov R.I. Specific natural DNA-bound lipids in post-genome era. The lipid conception of chromatin organization. Bioelectrochemistry 56 (2002) 195-198
-
(2002)
Bioelectrochemistry
, vol.56
, pp. 195-198
-
-
Struchkov, V.A.1
Strazhevskaya, N.B.2
Zhdanov, R.I.3
|