-
2
-
-
0034927555
-
Analysis of variance for gene expression microarray data
-
Kerr, M.K., M. Martin, and G.A. Churchill. 2000. Analysis of variance for gene expression microarray data. J. Comput. Biol. 7:819-837.
-
(2000)
J. Comput. Biol.
, vol.7
, pp. 819-837
-
-
Kerr, M.K.1
Martin, M.2
Churchill, G.A.3
-
3
-
-
0036319960
-
Design issues for cDNA microarray experiments
-
Yang, Y.H. and T.P. Speed. 2002. Design issues for cDNA microarray experiments. Nat. Rev. Genet. 3:579-583.
-
(2002)
Nat. Rev. Genet.
, vol.3
, pp. 579-583
-
-
Yang, Y.H.1
Speed, T.P.2
-
4
-
-
0036900895
-
Fundamentals of experimental design for cDNA microarrays
-
Churchill, G.A. 2002. Fundamentals of experimental design for cDNA microarrays. Nat. Genet. 32(Suppl):490-495.
-
(2002)
Nat. Genet.
, vol.32
, Issue.SUPPL.
, pp. 490-495
-
-
Churchill, G.A.1
-
5
-
-
0035684378
-
A model for measurement error for gene expression arrays
-
Rocke, D.M. and B. Durbin. 2001. A model for measurement error for gene expression arrays. J. Comput. Biol. 8:557-569.
-
(2001)
J. Comput. Biol.
, vol.8
, pp. 557-569
-
-
Rocke, D.M.1
Durbin, B.2
-
6
-
-
1342294092
-
Normalization for cDNA microarray data: A robust composite method addressing single and multiple slide systematic variation
-
Yang, Y.H., S. Dudoit, P. Luu, D.M. Lin, V. Peng, J. Ngai, and T.P. Speed. 2002. Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation. Nucleic Acids Res. 30:e15.
-
(2002)
Nucleic Acids Res.
, vol.30
-
-
Yang, Y.H.1
Dudoit, S.2
Luu, P.3
Lin, D.M.4
Peng, V.5
Ngai, J.6
Speed, T.P.7
-
8
-
-
12344280017
-
Summaries of Affymetrix GeneChip probe level data
-
Irizarry, R.A., B.M. Bolstad, F. Collin, L.M. Cope, B. Hobbs, and T.P. Speed. 2003. Summaries of Affymetrix GeneChip probe level data. Nucleic Acids Res. 31:e15.
-
(2003)
Nucleic Acids Res.
, vol.31
-
-
Irizarry, R.A.1
Bolstad, B.M.2
Collin, F.3
Cope, L.M.4
Hobbs, B.5
Speed, T.P.6
-
9
-
-
0035687554
-
Assessing gene significance from cDNA microarray expression data via mixed models
-
Wolfinger, R.D., G. Gibson, E.D. Wolfinger, L. Bennett, H. Hamadeh, P. Bushel, C. Afshari, and R.S. Paules. 2001. Assessing gene significance from cDNA microarray expression data via mixed models. J. Comput. Biol. 8:625-637.
-
(2001)
J. Comput. Biol.
, vol.8
, pp. 625-637
-
-
Wolfinger, R.D.1
Gibson, G.2
Wolfinger, E.D.3
Bennett, L.4
Hamadeh, H.5
Bushel, P.6
Afshari, C.7
Paules, R.S.8
-
10
-
-
0035733752
-
The contributions of sex, genotype and age to transcriptional variance in Drosophila Melanogaster
-
Jin, W., R.M. Riley, R.D. Wolfinger, K. White, G. Passador-Gurgel, and G. Gibson. 2001. The contributions of sex, genotype and age to transcriptional variance in Drosophila Melanogaster. Nat. Genet. 29:389-395.
-
(2001)
Nat. Genet.
, vol.29
, pp. 389-395
-
-
Jin, W.1
Riley, R.M.2
Wolfinger, R.D.3
White, K.4
Passador-Gurgel, G.5
Gibson, G.6
-
11
-
-
3943112078
-
How many mice and how many arrays? Replication in mouse cDNA microarray experiments
-
K.F. Johnson and S.M. Lin (Eds.), Kluwer Academic, Norwell, MA
-
Cui, X.Q. and G.A. Churchill. 2003. How many mice and how many arrays? Replication in mouse cDNA microarray experiments, p. 139-154. In K.F. Johnson and S.M. Lin (Eds.), Methods of Microarray Data Analysis III. Kluwer Academic, Norwell, MA.
-
(2003)
Methods of Microarray Data Analysis III
, pp. 139-154
-
-
Cui, X.Q.1
Churchill, G.A.2
-
12
-
-
3142715303
-
Analysis of variance components in gene expression data
-
Chen, J.J., R.R. Delongchamp, C.-A. Tsai, H. Hsueh, F. Sistare, K.L. Thompson, V.G. Desai, and J.C. Fuscoe. 2004. Analysis of variance components in gene expression data. Bioinformatics 20:1436-1446.
-
(2004)
Bioinformatics
, vol.20
, pp. 1436-1446
-
-
Chen, J.J.1
Delongchamp, R.R.2
Tsai, C.-A.3
Hsueh, H.4
Sistare, F.5
Thompson, K.L.6
Desai, V.G.7
Fuscoe, J.C.8
-
13
-
-
0043203327
-
Multiple hypothesis testing in microarray experiments
-
Dudoit, S., J.P. Shaffer, and J.C. Boldrick. 2003. Multiple hypothesis testing in microarray experiments. Stat. Sci. 18:71-103.
-
(2003)
Stat. Sci.
, vol.18
, pp. 71-103
-
-
Dudoit, S.1
Shaffer, J.P.2
Boldrick, J.C.3
-
14
-
-
0042424602
-
Statistical significance for genome-wide studies
-
Storey, J.D. and R. Tibshirani. 2003. Statistical significance for genome-wide studies. Proc. Natl. Acad. Sci. USA 100:9440-9445.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 9440-9445
-
-
Storey, J.D.1
Tibshirani, R.2
-
15
-
-
0037276175
-
Statistical tests for differential expression in cDNA microarray experiments
-
Cui, X.Q. and G.A. Churchill. 2003. Statistical tests for differential expression in cDNA microarray experiments. Genome Biol. 4:210.
-
(2003)
Genome Biol.
, vol.4
, pp. 210
-
-
Cui, X.Q.1
Churchill, G.A.2
-
16
-
-
3943101158
-
Improved statistical tests for differential gene expression by shrinking variance components
-
In press
-
Cui, X.Q., G. Hwang, J. Qiu, N. Blades, and G.A. Churchill. Improved statistical tests for differential gene expression by shrinking variance components. Biostatistics (In press).
-
Biostatistics
-
-
Cui, X.Q.1
Hwang, G.2
Qiu, J.3
Blades, N.4
Churchill, G.A.5
-
17
-
-
0003605027
-
-
SAS Institute, Cary, NC
-
Littlell, R.C., G. Milliken, W.W. Stroup, and R.D. Wolfinger. 1996. SAS System for Mixed Models. SAS Institute, Cary, NC.
-
(1996)
SAS System for Mixed Models
-
-
Littlell, R.C.1
Milliken, G.2
Stroup, W.W.3
Wolfinger, R.D.4
|