Molecular detection and prevalence of enterovirus within environmental water in Taiwan

Journal of Applied Microbiology

Volumn 104, Issue 3, 2008, Pages 817-823

  Chen, C H ^a   Hsu, B M ^b   Wan, M T ^a  

^a TATUNG UNIVERSITY   (Taiwan)

^b NATIONAL CHUNG CHENG UNIVERSITY   (Taiwan)

Author keywords

Enterovirus; Environmental water; Molecular detection; Prevalence; Taiwan

Indexed keywords

GROUNDWATER; POLYMERASE CHAIN REACTION; SEWAGE; SURFACE WATERS; VIRUSES; WATER POLLUTION;

DETECTION RATES; ENTEROVIRUS; ENVIRONMENTAL SAMPLE; ENVIRONMENTAL WATER; MOLECULAR DETECTION; PREVALENCE; REVERSE TRANSCRIPTION-POLYMERASE CHAIN REACTION; SEWAGE WATER; TAIWAN; WATER-WATER;

RNA;

DETECTION METHOD; EPIDEMIOLOGY; GENOTYPE; IDENTIFICATION METHOD; MOLECULAR ANALYSIS; POLYMERASE CHAIN REACTION; RNA; SAMPLING; SEWAGE; VIRUS; WATER QUALITY;

5' UNTRANSLATED REGION; ARTICLE; COXSACKIE VIRUS A; ECHO VIRUS; ENTEROVIRUS; ENVIRONMENTAL MONITORING; GENOTYPE; NONHUMAN; NUCLEOTIDE SEQUENCE; PREVALENCE; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SEWAGE; TAIWAN; VIRUS DETECTION; VIRUS ISOLATION;

ASIA; EURASIA; FAR EAST; TAIWAN;

ENTEROVIRUS; HUMAN ECHOVIRUS 11; HUMAN ENTEROVIRUS 71; SUS;

EID: 39149095559     PISSN: 13645072     EISSN: 13652672     Source Type: Journal    
DOI: 10.1111/j.1365-2672.2007.03598.x     Document Type: Article

References (29)

1. Abbaszadegan, M., Huber, M.S., Gerba, C.P. Pepper, I.L. (1993) Detection of enteroviruses in groundwater with the polymerase chain reaction. Appl Environ Microbiol 59, 1318 1324.
2. Abbaszadegan, M., Stewart, P. LeChevallier, M. (1999) A strategy for detection of viruses in groundwater by PCR. Appl Environ Microbiol 65, 444 449.
3. Bosch, A. (1998) Human enteric viruses in the water environment: minireview. Int Microbiol 1, 191 196.
4. Cardosa, M.J., Perera, D., Brown, B.A., Cheon, D., Chan, H.M., Chan, K.P., Cho, H. McMinn, P. (2003) Molecular epidemiology of human enterovirus 71 strains and recent outbreaks in the Asia-Pacific region: comparative analysis of the VP1 and VP4 genes. Emerg Infect Dis 9, 461 468.
5. Carter, M.J. (2005) Enterically infecting viruses: pathogenicity, transmission and significance for food and waterborne infection. J Appl Microbiol 98, 1354 1380.
6. Chou, M.Y. Malison, M.D. (1988) Outbreak of acute hemorrhagic conjuntivitis due to Coxackie A24 variant-Taiwan. Am J Epidemiol 27, 795 800.
7. Fong, T.T. Lipp, E.K. (2005) Enteric viruses of humans and animals in aquatic environments: health risks, detection, and potential water quality assessment tools. Microbiol Mol Biol Rev 69, 357 371.
8. Fong, T.T., Griffin, D.W. Lipp, E.K. (2005) Molecular assays for targeting human and bovine enteric viruses in coastal waters and their application for library-independent source tracking. Appl Environ Microbiol 71, 2070 2078.
9. Fuhrman, J.A., Liang, X. Noble, R.T. (2005) Rapid detection of enteroviruses in small volumes of natural waters by real-time quantitative reverse transcriptase PCR. Appl Environ Microbiol 71, 4523 4530.
10. Griffin, D.W., Donaldson, K.A., Paul, J.H. Joan, B.R. (2003) Pathogenic human virus in coastal waters. Clin Microbiol Rev 16, 129 143.
11. Hafliger, D., Gilgen, M., Luthy, J. Hubner, P. (1997) Seminested RT-PCR systems for small round structured viruses and detection of enteric viruses in seafood. Int J Food Microbiol 37, 27 36.
12. Hsu, B.M., Chen, C.H., Kung, C.M., Wan, M.T. Shen, S.M. (2007) Evaluation of enterovirus recovery in surface water by different adsorption and elution procedures. Chemosphere 66, 964 969.
13. Jean, J.S. (1999) Outbreak of enteroviruses and groundwater contamination in Taiwan: Concept of biomedical hydrogeology. Hydrogeol J 7, 339 340.
14. Kocwa-Haluch, R. (2001) Waterborne enteroviruses as a hazard for human health. Pol J Environ Stud 10, 485 487.
15. Kumar, S., Tamura, K. Nei, M. (2004) MEGA3: intergrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5, 150 163.
16. Lee, S.G., Lin, T.L., Ko, Y.F., Yang, W.C., Wu, S.L., Wang, S.F., Yang, S.Y., Yang, C.Y. et al. (2005a) Analysis of epidemic serotypes of enterovirus in Taiwan during 1998-2004. Epidemiol Bull 21, 96 117.
17. Lee, S.H., Lee, C., Lee, K.W., Cho, H.B. Kim, S.J. (2005b) The simultaneous detection of both enteroviruses and adenoviruses in environmental water samples including tap water with an integrated cell culture-multiplex- nested PCR procedure. J Appl Microbiol 98, 1020 1029.
18. Lin, K.H., Hwang, K.P., Ke, G.M., Wang, C.F., Ke, L.Y., Hsu, Y.T., Tung, Y.C., Chu, P.Y. et al. (2006) Evolution of EV71 genogroup in Taiwan from 1998 to 2005: an emerging of subgenogroup C4 of EV71. J Med Virol 78, 254 262.
19. Lodder, W.J., Husman, A.M. de, R. (2005) Presence of noroviruses and other enteric viruses in sewage and surface waters in the Netherlands. Appl Environ Microbiol 71, 1453 1461.
20. Melnick, J.L., Gerba, C.P. Wallis, C. (1978) Viruses in water. Bull WHO 56, 499 508.
21. Oberste, M.S., Maher, K., Kilpatrick, D.R., Flemister, M.R., Brown, B.A. Pallansch, M.A. (1999) Typing of human enteroviruses by partial sequencing of VP1. J Clin Microbiol 37, 1288 1293.
22. Oberste, M.S., Nix, W.A., Maher, K. Pallansch, M.A. (2003) Improved molecular identification of enteroviruses by RT-PCR and amplicon sequencing. J Clin Virol 26, 375 377.
23. Pallanch, M.A. Ross, R.P. (2001) Enteroviruses: polioviruses, coxsackie, echoviruses and newer enteroviruses. In Fields Virology, 4th edn ed. Knipe, D. Howley, P. pp. 723 775. Baltimore, MD : Williams and Wilkins Publishers.
24. Pianetti, A., Baffone, W., Citterio, B., Casaroli, A., Bruscolini, F. Salvaggio, L. (2000) Presence of enteroviruses and reoviruses in the waters of the Italian coast of the Adriatic Sea. Epidemiol Infect 125, 455 462.
25. Rose, J.B., Mullinax, R.L., Singh, S.N., Yates, M.V. Gerba, C.P. (1987) Occurrence of rotaviruses and enteroviruses in recreational waters of Oak Creek, Arizona. Water Res 21, 1375 1381.
26. Sobsey, M.D., Shields, P.A., Hauchman, F.S., Hazard, R.L. Caton, L.W. (1986) Survival and transport of hepatitis A virus in soils, groundwater and wastewater. Water Sci Technol 18, 97 106.
27. U.S. Environmental Protection Agency. (1998) Announcement of the drinking water contaminant candidate list. EPA-815-Z-98-001. Fed Regist 63, 10273 10287.
28. Vivier, J.C., Ehlers, M.M. Grabow, W.O.K. (2004) Detection of enteroviruses in treated drinking water. Water Res 38, 2699 2705.
29. Yates, M.V., Gerba, C.P. Kelley, L.M. (1985) Virus persistence in groundwater. Appl Environ Microbiol 49, 778 781.