-
1
-
-
0028363566
-
Ino2 and Ino4 gene products, positive regulators of phospholipid biosynthesis in Saccharomyces cerevisiae, form a complex that binds to the Ino1 promoter
-
Ambroziak,J. et al. (1994) Ino2 and Ino4 gene products, positive regulators of phospholipid biosynthesis in Saccharomyces cerevisiae, form a complex that binds to the Ino1 promoter. J. Biol. Chem, 269, 15344-15349.
-
(1994)
J. Biol. Chem
, vol.269
, pp. 15344-15349
-
-
Ambroziak, J.1
-
2
-
-
0027092071
-
Interaction of the yeast Swi4 and Swi6 cell cycle regulatory proteins in vitro
-
Andrews,B.J. et al. (1992) Interaction of the yeast Swi4 and Swi6 cell cycle regulatory proteins in vitro. Proc. Natl Acad. Sci. USA 89, 11852-11856.
-
(1992)
Proc. Natl Acad. Sci. USA
, vol.89
, pp. 11852-11856
-
-
Andrews, B.J.1
-
3
-
-
33745449162
-
Comprehensive analysis of combinatorial regulation using the transcriptional regulatory network of yeast
-
Balaji,S. et al. (2006) Comprehensive analysis of combinatorial regulation using the transcriptional regulatory network of yeast. J. Mol. Biol., 360, 213-227.
-
(2006)
J. Mol. Biol
, vol.360
, pp. 213-227
-
-
Balaji, S.1
-
4
-
-
30344444644
-
-
Sensing your surroundings: How transcription-regulatory networks of the cell discern environmental signals, pe20
-
Balazsi,G. et al. (2005) Sensing your surroundings: How transcription-regulatory networks of the cell discern environmental signals. Sci. STKE, 282, pe20.
-
(2005)
Sci. STKE
, vol.282
-
-
Balazsi, G.1
-
5
-
-
0345099564
-
Identifying cooperativity among transcription factors controlling the cell cycle in yeast
-
Banerjee,N. et al. (2003) Identifying cooperativity among transcription factors controlling the cell cycle in yeast. Nucleic acids Res., 31, 7024-7031.
-
(2003)
Nucleic acids Res
, vol.31
, pp. 7024-7031
-
-
Banerjee, N.1
-
6
-
-
1242316281
-
ChIP-chip: Considerations for the design, analysis and application of genome-wide chromatin immunoprecipitation experiments
-
Buck,M.J. et al. (2004) ChIP-chip: Considerations for the design, analysis and application of genome-wide chromatin immunoprecipitation experiments. Genomics, 83, 349-360.
-
(2004)
Genomics
, vol.83
, pp. 349-360
-
-
Buck, M.J.1
-
7
-
-
33748694308
-
Identification of transcription factor cooperativity via stochastic system model
-
Chang,Y.H. et al. (2006) Identification of transcription factor cooperativity via stochastic system model. Bioinformatics, 22 2276-2282.
-
(2006)
Bioinformatics
, vol.22
, pp. 2276-2282
-
-
Chang, Y.H.1
-
8
-
-
0002629270
-
Maximum liklihood from incomplete data via the EM algorithm
-
Dempster,A. et al. (1977) Maximum liklihood from incomplete data via the EM algorithm. J. R. Stat. Society, Ser. B, 39, 1-38.
-
(1977)
J. R. Stat. Society, Ser. B
, vol.39
, pp. 1-38
-
-
Dempster, A.1
-
9
-
-
2142732441
-
Largo-scale simlutaneous hypothesis testing: The choice of a null hypothesis
-
Efron,B. (2004) Largo-scale simlutaneous hypothesis testing: The choice of a null hypothesis. J. Am. Stat. Assoc., 99, 96-104.
-
(2004)
J. Am. Stat. Assoc
, vol.99
, pp. 96-104
-
-
Efron, B.1
-
10
-
-
4544352942
-
Transcriptional regulatory code of an eucaryotic genome
-
Harbison,C.T. et al. (2004) Transcriptional regulatory code of an eucaryotic genome. Nature, 431, 99-104.
-
(2004)
Nature
, vol.431
, pp. 99-104
-
-
Harbison, C.T.1
-
11
-
-
0035945567
-
Genomic binding sites of the yeast-cell-cycle transcription factors SBF and MBF
-
Iyer,V.R. et al. (2001) Genomic binding sites of the yeast-cell-cycle transcription factors SBF and MBF. Nature, 409 533-538.
-
(2001)
Nature
, vol.409
, pp. 533-538
-
-
Iyer, V.R.1
-
12
-
-
0343442520
-
Forkhead transcription factors, Fkh1p and Fkh2p, ollaborate with Mcm1p to control transcription required for M-phase
-
Kumar,R. et al. (2000) Forkhead transcription factors, Fkh1p and Fkh2p, ollaborate with Mcm1p to control transcription required for M-phase. Curr. Biol., 10, 896-906.
-
(2000)
Curr. Biol
, vol.10
, pp. 896-906
-
-
Kumar, R.1
-
13
-
-
0027501142
-
A role for the transcriplion factors Mbp1 and Swi4 in progression from G1 to S phase
-
Koch,C. et al. (1993) A role for the transcriplion factors Mbp1 and Swi4 in progression from G1 to S phase. Science, 261, 1551-1557.
-
(1993)
Science
, vol.261
, pp. 1551-1557
-
-
Koch, C.1
-
14
-
-
0034612501
-
Forkhead-like transcription factors recruit Ndd1 to the chromatin of G2/M-specific promoters
-
Koranda,M. et al. (2000) Forkhead-like transcription factors recruit Ndd1 to the chromatin of G2/M-specific promoters. Nature, 406, 94-98.
-
(2000)
Nature
, vol.406
, pp. 94-98
-
-
Koranda, M.1
-
15
-
-
0034934774
-
Promoter-specific binding of Rap1 revealed by genome-wide maps of protein-DNA association
-
Lieb,J.D. et al. (2001) Promoter-specific binding of Rap1 revealed by genome-wide maps of protein-DNA association. Nat. Genet., 28 327-334.
-
(2001)
Nat. Genet
, vol.28
, pp. 327-334
-
-
Lieb, J.D.1
-
16
-
-
4644326931
-
Genomic analysis of network dynamics reveals large topological changes
-
Luscombe,N.M. et al. (2004) Genomic analysis of network dynamics reveals large topological changes. Nature, 431, 308-312.
-
(2004)
Nature
, vol.431
, pp. 308-312
-
-
Luscombe, N.M.1
-
17
-
-
0141792394
-
Correlating protein-DNA and protein-protein interaction networks
-
Manke,T. et al. (2003) Correlating protein-DNA and protein-protein interaction networks. J. Mol. Biol., 333, 75-85.
-
(2003)
J. Mol. Biol
, vol.333
, pp. 75-85
-
-
Manke, T.1
-
19
-
-
0025944525
-
The role of Swi4 and swi6 in the activity of G1 cyclins in yeast
-
Nasmyth,K. et al. (2004) The role of Swi4 and swi6 in the activity of G1 cyclins in yeast. Cell, 66, 995-1013.
-
(2004)
Cell
, vol.66
, pp. 995-1013
-
-
Nasmyth, K.1
-
20
-
-
0034679603
-
The forkhead protein Fkb2 is a component of the yeast cell cycle transcription factor SFF
-
Pic,A. et al. (2000) The forkhead protein Fkb2 is a component of the yeast cell cycle transcription factor SFF. EMBO J., 19, 3750-3761.
-
(2000)
EMBO J
, vol.19
, pp. 3750-3761
-
-
Pic, A.1
-
21
-
-
0034785443
-
Identifying regulatory networks by combinatorial analysis of promoter elements
-
Pilpel,Y. et al. (2001) Identifying regulatory networks by combinatorial analysis of promoter elements. Nat. Genet., 29 153-159.
-
(2001)
Nat. Genet
, vol.29
, pp. 153-159
-
-
Pilpel, Y.1
-
22
-
-
0034704248
-
Genome-wide location and function of DNA-binding proteins
-
Ren,B. et al. (2000) Genome-wide location and function of DNA-binding proteins. Science, 290, 2306-2309.
-
(2000)
Science
, vol.290
, pp. 2306-2309
-
-
Ren, B.1
-
23
-
-
0030839873
-
Rtg3p, a basic helix-loop-helix/ leucine zipper protein that functions in mitochondrial-induced changes in gene expression, contains independent activation domains
-
Rothermel,B.A. et al. (1997) Rtg3p, a basic helix-loop-helix/ leucine zipper protein that functions in mitochondrial-induced changes in gene expression, contains independent activation domains. J. Biol. Chem., 272, 19801-19807.
-
(1997)
J. Biol. Chem
, vol.272
, pp. 19801-19807
-
-
Rothermel, B.A.1
-
24
-
-
0031742022
-
Statistical methods for identifying yeast cell cycle transcription factors
-
Spellman,P.T. et al. (1998) Statistical methods for identifying yeast cell cycle transcription factors. Mol. Biol. Cell, 9, 3273-3297.
-
(1998)
Mol. Biol. Cell
, vol.9
, pp. 3273-3297
-
-
Spellman, P.T.1
-
25
-
-
33744501241
-
Bayesian error analysis model for reconstructing transcriptional regulatory networks
-
Sun,N. et al. (2006) Bayesian error analysis model for reconstructing transcriptional regulatory networks. Proc. Natl Acad. Sci. USA, 103, 7988-7993.
-
(2006)
Proc. Natl Acad. Sci. USA
, vol.103
, pp. 7988-7993
-
-
Sun, N.1
-
26
-
-
26444501081
-
Statistical methods for identifying yeast cell cycle transcription factors
-
Tsai,H.K. et al. (2005) Statistical methods for identifying yeast cell cycle transcription factors. Proc. Natl Acad. Sci. USA, 102, 13532-13537.
-
(2005)
Proc. Natl Acad. Sci. USA
, vol.102
, pp. 13532-13537
-
-
Tsai, H.K.1
-
27
-
-
27944453151
-
RSIR: Regularized sliced inverse regression for motif discovery
-
Zhong,W. et al. (2005) RSIR: Regularized sliced inverse regression for motif discovery. Bioinformatics, 21, 4169-4175.
-
(2005)
Bioinformatics
, vol.21
, pp. 4169-4175
-
-
Zhong, W.1
|