A rescue strategy for multimapping short sequence tags refines surveys of transcriptional activity by CAGE

Genomics

Volumn 91, Issue 3, 2008, Pages 281-288

  Faulkner, Geoffrey J ^a   Forrest, Alistair R R ^b,c   Chalk, Alistair M ^c   Schroder, Kate ^a   Hayashizaki, Yoshihide ^b   Carninci, Piero ^b,d   Hume, David A ^e   Grimmond, Sean M ^a  

^a UNIVERSITY OF QUEENSLAND   (Australia)

^b RIKEN YOKOHAMA INSTITUTE   (Japan)

^c GRIFFITH UNIVERSITY   (Australia)

^d RIKEN   (Japan)

^e UNIVERSITY OF EDINBURGH   (United Kingdom)

Author keywords

CAGE; Microarray; Promoter; Transcriptome

Indexed keywords

COMPLEMENTARY DNA; TRANSCRIPTOME;

ANIMAL CELL; ANIMAL EXPERIMENT; ANIMAL MODEL; ANIMAL TISSUE; ARTICLE; CAP ANALYSIS GENE EXPRESSION; CONTROLLED STUDY; CORRELATION ANALYSIS; DNA MICROARRAY; GENE LOCATION; GENE MAPPING; HIGH THROUGHPUT SCREENING; MOUSE; NONHUMAN; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN ANALYSIS; SEQUENCE TAGGED SITE; TRANSCRIPTION INITIATION; TRANSCRIPTION REGULATION;

ANIMALS; CHROMOSOME MAPPING; DNA, COMPLEMENTARY; GENE EXPRESSION PROFILING; GENE LIBRARY; MICE; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PROMOTER REGIONS (GENETICS); RNA CAPS; SEQUENCE TAGGED SITES; TRANSCRIPTION INITIATION SITE;

MAMMALIA;

EID: 39149083734     PISSN: 08887543     EISSN: 10898646     Source Type: Journal    
DOI: 10.1016/j.ygeno.2007.11.003     Document Type: Article

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