A perspective on the history of the iberian gypsies provided by phylogeographic analysis of Y-chromosome lineages

Annals of Human Genetics

Volumn 72, Issue 2, 2008, Pages 215-227

  Gusmao A ^a   Gusmão, Leonor ^a   Gomes, V ^a   Alves, C ^a   Calafell, F ^b   Amorim, A ^a   Prata, M J ^a  

^a UNIVERSITY OF PORTO   (Portugal)

^b UNIVERSITAT POMPEU FABRA   (Spain)

Author keywords

Gypsy diaspora; Portuguese Gypsies; Roma; Y chromosome lineages; Y SNP haplogroups; Y STR haplotypes

Indexed keywords

DNA;

ARTICLE; CHROMOSOME ANALYSIS; CONTROLLED STUDY; EUROPE; GENETIC DISTANCE; GENETIC DRIFT; GENETIC VARIABILITY; GEOGRAPHIC DISTRIBUTION; HAPLOTYPE MAP; HUMAN; INDIA; MALE; MIDDLE EAST; MIGRATION; MOLECULAR PHYLOGENY; PHYLOGEOGRAPHY; POPULATION GENETICS; PORTUGAL; PRIORITY JOURNAL; SHORT TANDEM REPEAT; SINGLE NUCLEOTIDE POLYMORPHISM; Y CHROMOSOME;

CHROMOSOMES, HUMAN, Y; CLUSTER ANALYSIS; DEMOGRAPHY; GENETICS, POPULATION; GYPSIES; HAPLOTYPES; HUMANS; MALE; PHYLOGENY; POLYMORPHISM, SINGLE NUCLEOTIDE; POPULATION DYNAMICS; PORTUGAL;

EID: 39049119493     PISSN: 00034800     EISSN: 14691809     Source Type: Journal    
DOI: 10.1111/j.1469-1809.2007.00421.x     Document Type: Article

References (45)

1. Adams, S. M., King, T. E., Bosch, E. & Jobling, M. A. (2006) The case of the unreliable SNP: Recurrent back-mutation of Y-chromosomal marker P25 through gene conversion. Forensic Sci Int 159, 14-20.
2. Alves, C., Gomes, V., Prata, M. J., Amorim, A. & Gusmão, L. (2007) Population data for Y-chromosome haplotypes defined by 17 STRs (AmpFlSTR YFiler) in Portugal. Forensic Sci Int 171, 250-255.
3. Barać, L., Pericić, M., Klarić, I. M., Rootsi, S., Janićijević, B., Kivisild, T., Parik, J., Rudan, I., Villems, R. & Rudan, P. (2003) Y chromosomal heritage of Croatian population and its island isolates. Eur J Hum Genet 11, 535-542.
4. Beleza, S., Alves, C., Gonzalez-Neira, A., Lareu, M., Amorim, A., Carracedo, A. & Gusmão, L. (2003) Extending STR markers in Y chromosome haplotypes. Int J Legal Med 117, 27-33.
5. Beleza, S., Gusmão, L., Lopes, A., Alves, C., Gomes, I., Giouzeli, M., Calafell, F., Carracedo, A. & Amorim, A. (2006) Micro-Phylogeographic and Demographic History of Portuguese Male Lineages. Ann Hum Genet 70, 181-194.
6. Berger, B., Lindinger, A., Niederstätter, H., Grubwieser, P. & Parson, W. (2005) YSTR typing of an Austrian population sample using a 17-loci multiplex PCR assay. Int J Legal Med 119, 241-246.
7. Blanco-Verea, A., Brión, M., Sánchez-Diz, P., Jaime, J. C., Lareu, M. V. & Carracedo, A. (2006) Analysis of Y chromosome lineages in native South American population. Progress in Forensic Genetics 11. International Congress Series 1288, 222-224.
8. Bosch, E., Calafell, F., Comas, D., Oefner, P. J., Underhill, P. A. & Bertranpetit, J. (2001) High-resolution analysis of human Y-chromosome variation shows a sharp discontinuity and limited gene flow between northwestern Africa and the Iberian Peninsula. Am J Hum Genet 68, 1019-1029.
9. Brión, M., Sobrino, B., Blanco-Verea, A., Lareu, M. V. & Carracedo, A. (2005) Hierarchical analysis of 30 Y-chromosome SNPs in European populations. Int J Legal Med 119, 10-15.
10. Cinniog̀lu, C., King, R., Kivisild, T., Kalfog̀lu, E., Atasoy, S., Cavalleri, G. L., Lillie, A. S., Roseman, C. C., Lin, A. A., Prince, K., Oefner, P. J., Shen, P., Semino, O., Cavalli-Sforza, L. L. & Underhill, P. A. (2004) Excavating Y-chromosome haplotype strata in Anatolia. Hum Genet 114, 127-148.
11. Coelho, F. A. (1996) Os ciganos de Portugal, com um estudo do calão. Dom Quixote. Lisboa
12. Cruciani, F., La Fratta, R., Santolamazza, P., Sellitto, D., Pascone, R., Moral, P., Watson, E., Guida, V., Colomb, E. B., Zaharova, B., Lavinha, J., Vona, G., Aman, R., Cali, F., Akar, N., Richards, M., Torroni, A., Novelletto, A. & Scozzari, R. (2004) Phylogeographic analysis of haplogroup E3b (E-M215) Y chromosomes reveals multiple migratory events within and out of Africa. Am J Hum Genet 74, 1014-1022.
13. Di Giacomo, F., Luca, F., Popa, L. O., Akar, N., Anagnou, N., Banyko, J., Brdicka, R., Barbujani, G., Papola, F., Ciavarella, G., Cucci, F., Di Stasi, L., Gavrila, L., Kerimova, M. G., Kovatchev, D., Kozlov, A. I., Loutradis, A., Mandarino, V., Mammi, C., Michalodimitrakis, E. N., Paoli, G., Pappa, K. I., Pedicini, G., Terrenato, L., Tofanelli, S., Malaspina, P. & Novelletto, A. (2004) Y chromosomal haplogroup J as a signature of the post-neolithic colonization of Europe. Hum Genet 115, 357-371.
14. Excoffier, L. G. & Scheinder, S. (2005) Arlequin ver.3.0: An integrated software package for population genetics data analysis. Evolutionary Bioinformatics Online 1, 47-50.
15. Fraser, A. (1998) História do Povo Cigano. Tradução de Costa T. Editorial Teorema, LDA
16. Füredi, S., Woller, J., Padar, Z. & Angyal, M. (1999) Y-STR haplotyping in two Hungarian populations. Int J Legal Med 113, 38-42.
17. Gresham, D., Morar, B., Underhill, P. A., Passarino, G., Lin, A. A., Wise, C., Angelicheva, D., Calafell, F., Oefner, P. J., Shen, P., Tournev, I., de Pablo, R., Kucinskas, V., Perez-Lezaun, A., Marushiakova, E., Popov, V. & Kalaydjieva, L. (2001) Origins and divergence of the Roma (gypsies). Am J Hum Genet 69, 1314-1331.
18. Gusmão, L., Butler, J. M., Carracedo, A., Gill, P., Kayser, M., Mayr, W. R., Morling, N., Prinz, M., Roewer, L., Tyler-Smith. C. & Schneider, P. M. (2006) DNA Commission of the International Society of Forensic Genetics (ISFG): An update of the recommendations on the use of Y-STRs in forensic analysis. Forensic Sci Int 157, 187-197.
19. Jobling, M. A. & Tyler-Smith, C. (2003) The Human Y Chromosome: An evolutionary Marker Comes of Age. Nature Reviews Genetics 4, 598-612.
20. Kalaydjieva, L., Calafell, F., Jobling, M. A., Angelicheva, D., de Knijff, P., Rosser, Z. H., Hurles, M. E., Underhill, P., Tournev, I., Marushiakova, E. & Popov V (2001a) Patterns of inter- and intra-group genetic diversity in the Vlax Roma as revealed by Y chromosome and mitochondrial DNA lineages. Eur J Hum Genet 9, 97-104.
21. Kalaydjieva, L., Gresham, D. & Calafell, F. (2001b) Genetic studies of the Roma (Gypsies): A review. BMC Medical Genetics 2, 5.
22. Kendrick, D. & Puxon, G. (1998) Ciganos: Da Índia ao Mediterrâneo. Colecção Interface 3.
23. Kivisild, T., Rootsi, S., Metspalum, M., Mastanam, S., Kaldmam, K., Parik, J., Metspalu, E., Adojaan, M., Tolk, H. V., Stepanov, V., Golge, M., Usanga, E., Papiha, S. S., Cinnioglu, C., King, R., Cavalli-Sforza, L., Underhill, P. A. & Villems, R. (2003) The genetic heritage of the earliest settlers persists both in Indian tribal and caste populations. Am J Hum Genet 72, 313-332.
24. Liégeois, J. P. (1989) Ciganos e Itinerantes: Dados socioculturais. Dados sociopolíticos. Santa Casa da Misericórdia de Lisboa. 1Edição
25. Malayarchuk, B. A., Grzybowski, T., Deremko, M. V., Czarny, J. & Miscicka-Sliwka, D. (2006) Mitochondrial DNA diversity in the Polish Roma. Ann Hum Genet 70, 195-206.
26. Martín, P., Garcia-Hirchfeld, J., Garcia, O., Gusmão, L., Albarran, C., Sancho, M. & Alonso, A. (2004) A Spanish population study of 17 Y chromosome STR loci. Forensic Sci Int 139, 231-235.
27. Morar, B., Gresham, D., Angelicheva, D., Tournev, I., Gooding, R., Guergueltcheva, V., Schmidt, C., Abicht, A., Lochmüller, H., Tordai, A., Kalmár, L., Nagy, M., Karcagi, V., Jeanpierre, M., Herczegfalvi, A., Beeson, D., Venkataraman, V., Carter, K. W., Reeve, J., de Pablo, R., Kučinskas, V. & Kalaydjieva, L. (2004) Mutation history of the Roma/Gypsies. Am J Hum Genet 75, 596-609.
28. Mulero, J. J., Budowle, B., Butler, J. M. & Gusmão, L. (2006) Letter to the editor -nomenclature and allele repeat structure update for the Y-STR locus GATA H4. J Forensic Sci 51, 694.
29. Nagy, M., Henke, L., Henke, J., Chatthopadhyay, P. K., Volgyi, A., Zalan, A., Peterman, O., Bernasovska, J. & Pamjav, H. (2007) Searching for the origin of Romanies: Slovakian Romani, Jats of Haryana and Jat Sikhs Y-STR data in comparison with different Romani populations. Forensic Sci Int 69, 19-26.
30. Peričić, M., Klarić, I. M., Lauc, L. B., Janićijević, B., Dordević, D., Efremovska, L. & Rudan, P. (2005a) Population genetics of 8 Y chromosome STR loci in Macedonians and Macedonian Romani (Gypsy). Forensic Sci Int 154, 257-261.
31. Peričić, M., Lauc, L. B., Klarić, I. M., Rootsi, S., Janićijević, B., Rudan, I., Terzić, R., Čolak, I., Kvesić, A., Popović, D., Šijački, A., Behluli, I., Dordević, D., Efremovska, L., Bajec, D. D., Stefanović, B. D., Villems, R. & Rudan, P. (2005b) High-resolution phylogenetic analysis of southeastern Europe traces major episodes of paternal gene flow among Slavic populations. Mol Biol Evol 22, 1964-1975.
32. Ploski, R., Wozniak, M., Pawlowski, R., Monies, D. M., Branicki, W., Kupiec, T., Kloosterman, A., Dobosz, T., Bosch, E., Nowak, M., Lessig, R., Jobling, M. A., Roewer, L. & Kayser, M. (2002) Homogeneity and distinctiveness of Polish paternal lineages revealed by Y chromosome microsatellite haplotype analysis. Hum Genet 110, 592-600.
33. Regueiro, M., Cadenas, A. M., Gayden, T., Underhill, P. A. & Herrera, R. J. (2006) Iran: Tricontinental nexus for Y-chromosome driven migration. Hum Hered 61, 132-143.
34. Rosser, Z. H., Zerjal, T., Hurles, M. E., Adojaan, M., Alavantic, D., Amorim, A., Amos, W., Armenteros, M., Arroyo, E., Barbujani, G., Beckman, G., Beckman, L., Bertranpetit, J., Bosch, E., Bradley, D. G., Brede, G., Cooper, G., Côrte-Real, H.B, de Knijff, P., Decorte, R., Dubrova, Y. E., Evgrafov, O., Gilissen, A., Glisic, S., Gölge, M., Hill, E. W., Jeziorowska, A., Kalaydjieva, L., Kayser, M., Kivisild, T., Kravchenko, S. A., Krumina, A., Kucinskas, V., Lavinha, J., Livshits, L. A., Malaspina, P., Maria, S., McElreavey, K., Meitinger, T. A., Mikelsaar, A. V., Mitchell, R. J., Nafa, K., Nicholson, J., Nørby, S., Pandya, A., Parik, J., Patsalis, P. C., Pereira, L., Peterlin, B., Pielberg, G., Prata, M. J., Previderé, C., Roewer, L., Rootsi, S., Rubinsztein, D. C., Saillard, J., Santos, F. R., Stefanescu, G., Sykes, B. C., Tolun, A., Villems, R., Tyler-Smith, C. & Jobling, M. A. (2000) Y-chromosomal diversity in Europe is clinal and influenced primarily by geography, rather than by language. Am J Hum Genet 67, 1526-1543.
35. Rootsi, S., Magri, C., Kivisild, T., Benuzzi, G., Help, H., Bermisheva, M., Kutuev, I., Barac, L., Peričić, M., Balanovsky, O., Pshenichnov, A., Dion, D., Grobei, M., Zhivotovsky, L. A., Battaglia, V., Achilli, A., Al-Zahery, N., Parik, J., King, R., Cinniog̀lu, C., Khusnutdinova, E., Rudan, P., Balanovska, E., Scheffrahn, W., Simonescu, M., Brehm, A., Goncalves, R., Rosa, A., Moisan, J. P., Chaventre, A., Ferak, V., Füredi, S., Oefner, P. J., Shen, P., Beckman, L., Mikerezi, I., Terzic, R., Primorac, D., Cambon-Thomsen, A., Krumina, A., Torroni, A., Underhill, P. A., Santachiara-Benerecetti, A. S., Villems, R. & Semino, O. (2004) Phylogeography of Y-chromosome haplogroup I reveals distinct domains of prehistoric gene flow in Europe. Am J Hum Genet 75, 128-137.
36. Semino, O., Passarino, G., Oefner, P. J., Lin, A. A., Arbuzova, S., Beckman, L. E., De Benedictis, G., Francalacci, P., Kouvatsi, A., Limborska, S., Marcikiae, M., Mika, A., Mika, B., Primorac, D., Santachiara-Benerecetti, A. S., Cavalli-Sforza, L. L. & Underhill, P. A. (2000) The genetic legacy of paleolithic homo sapiens in extant europeans: A Y-chromosome prespective. Science 290, 1155-1159.
37. Semino, O., Magri, C., Benuzzi, G., Lin, A. A., Al-Zahery, N., Battaglia, V., Maccioni, L., Triantaphyllidis, C., Shen, P., Oefner, P. J., Zhivotovsky, L. A., King, R., Torroni, A., Cavalli-Sforza, L. L., Underhill, P. A. & Santachiara-Benerecetti, A. S. (2004) Origin, diffusion, and differentiation of Y-chromosome haplogroups E and J: inferences on the neolithization of Europe and later migratory events in the Mediterranean area. Am J Hum Genet 74, 1023-1034.
38. Sengupta, S., Zhivotovsky, L. A., King, R., Mehdi, S. Q., Edmonds, C. A., Chow, C. T., Lin, A. A., Mitra, M., Sil, S. K., Ramesh, A., Rani, M. V. U., Thakur, C. M., Cavalli-Sforza, L. L., Majumder, P. P. & Underhill, P. A. (2006) Polarity and temporality of high-resolution Y-chromosome distribution in India identify both indigenous and exogenous expansions and reveal minor genetic influence of Central Asian Pastoralists. Am J Hum Genet 78, 202-221.
39. Soltyszewski, I., Pepinski, W., Spolnicka, M., Kartasinska, E., Konarzewska, M. & Janica, J. (2007) Y-chromosomal haplotypes for the AmpFlSTR Yfiler PCR Amplification Kit in a population sample from Central Poland. Forensic Sci Int 168, 61-7.
40. Turrina, S., Atzei, R. & De Leo, D. (2006) Y-chromosomal STR haplotypes in a Northeast Italian population sample using 17plex loci PCR assay. Int J Legal Med 120, 56-59.
41. Underhill, P. A., Passarino, G., Lin, A. A., Shen, P., Mirazon-Lahar, M., Foley, R. A., Oefner, P. J. & Cavalli-Sforza, L. L. (2001) The phylogeography of Y-chromosome binary haplotypes and the origins of modern human populations. Ann Hum Genet 65, 43-62.
42. Willuweit, S., Roewer, L., on behalf of the International Forensic Y Chromosome User Group (2007) Y chromosome haplotype reference database (YHRD): Update. Forensic Sci Int: Genetics 1, 83-87.
43. Y Chromosome Consortium (2002) A nomenclature system for the tree of human Y-chromosomal binary haplogroups. Genome Res 12, 339-348.
44. Zaharova, B., Andonova, S., Gilissen, A., Cassiman, J. J., Decorte, R. & Kremensky, I. (2001) Y-chromosomal STR haplotypes in three major population groups in Bulgaria. Forensic Sci Int 124, 182-186.
45. Zerjal, T., Pandya, A., Thangaraj, K., Ling, E. Y., Kearley, J., Bertoneri, S., Paracchini, S., Singh, L. & Tyler-Smith, C. (2007) Y-chromosomal insights into the genetic impact of the caste system in India. Hum Genet 121, 137-144.